Jatropha Genome Database
- JcCA0310831.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0310831.10 - phase: 0 /pseudo/partial/short
(41 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma14g10540.1 59 1e-09
Glyma06g05310.1 59 2e-09
Glyma05g30070.1 54 4e-08
Glyma14g39460.1 54 5e-08
Glyma08g13210.1 53 6e-08
Glyma03g41280.1 53 9e-08
Glyma14g39450.1 52 1e-07
Glyma17g18890.1 51 3e-07
Glyma14g21290.1 51 3e-07
Glyma08g17180.1 51 3e-07
Glyma19g43900.1 51 3e-07
Glyma15g42010.1 50 4e-07
Glyma08g17180.3 50 5e-07
Glyma08g17180.2 50 5e-07
Glyma20g36380.1 49 2e-06
Glyma02g04240.1 48 2e-06
Glyma01g03390.1 48 2e-06
Glyma14g22180.1 47 4e-06
>Glyma14g10540.1
Length = 376
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/32 (75%), Positives = 27/32 (84%)
Query: 10 LQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQV 41
+Q EDGDVIDC+DI KQPAF HP LK HKIQ+
Sbjct: 46 IQSEDGDVIDCIDINKQPAFDHPALKGHKIQM 77
>Glyma06g05310.1
Length = 345
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/32 (71%), Positives = 27/32 (84%)
Query: 10 LQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQV 41
LQ EDGD+IDCV+IY QPAF HP LKNH I++
Sbjct: 1 LQSEDGDIIDCVNIYDQPAFDHPALKNHTIKM 32
>Glyma05g30070.1
Length = 418
Score = 53.9 bits (128), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/31 (70%), Positives = 24/31 (77%)
Query: 10 LQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQ 40
+Q DGD IDCV I KQPAF HP LK+HKIQ
Sbjct: 54 IQSPDGDTIDCVPISKQPAFDHPFLKDHKIQ 84
>Glyma14g39460.1
Length = 329
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 20/26 (76%), Positives = 24/26 (92%)
Query: 15 GDVIDCVDIYKQPAFSHPLLKNHKIQ 40
G++IDC+DI KQPAF HPLLKNHK+Q
Sbjct: 1 GEIIDCIDINKQPAFDHPLLKNHKLQ 26
>Glyma08g13210.1
Length = 418
Score = 53.1 bits (126), Expect = 6e-08, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 24/31 (77%)
Query: 10 LQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQ 40
+Q DGD IDCV + KQPAF HP LK+HKIQ
Sbjct: 54 IQSPDGDTIDCVPVSKQPAFDHPFLKDHKIQ 84
>Glyma03g41280.1
Length = 433
Score = 52.8 bits (125), Expect = 9e-08, Method: Composition-based stats.
Identities = 22/33 (66%), Positives = 25/33 (75%)
Query: 8 LVLQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQ 40
L ++ DGD+IDCV KQPA HPLLKNHKIQ
Sbjct: 69 LTIESPDGDLIDCVHKRKQPALDHPLLKNHKIQ 101
>Glyma14g39450.1
Length = 258
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 10 LQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQ 40
++ + GD+IDC+DI KQPAF HPLLKNHK+Q
Sbjct: 48 IRTKFGDIIDCIDINKQPAFDHPLLKNHKLQ 78
>Glyma17g18890.1
Length = 362
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 15 GDVIDCVDIYKQPAFSHPLLKNHKIQ 40
G ++DC+DI KQPAF HPLLKNHK+Q
Sbjct: 28 GYIVDCIDINKQPAFDHPLLKNHKLQ 53
>Glyma14g21290.1
Length = 312
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 15 GDVIDCVDIYKQPAFSHPLLKNHKIQ 40
G ++DC+DI KQPAF HPLLKNHK+Q
Sbjct: 24 GYIVDCIDINKQPAFDHPLLKNHKLQ 49
>Glyma08g17180.1
Length = 438
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/28 (71%), Positives = 23/28 (82%)
Query: 14 DGDVIDCVDIYKQPAFSHPLLKNHKIQV 41
DGDVIDC+ + QPAF HP LKNHKIQ+
Sbjct: 80 DGDVIDCIHVTHQPAFDHPDLKNHKIQM 107
>Glyma19g43900.1
Length = 416
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 8 LVLQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQ 40
L ++ DGD+IDCV KQPA HPLLK+HKIQ
Sbjct: 53 LTIESPDGDLIDCVHKRKQPALDHPLLKDHKIQ 85
>Glyma15g42010.1
Length = 406
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/32 (62%), Positives = 25/32 (78%)
Query: 10 LQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQV 41
++ DGDVIDC+ + QPAF HP LKNHKIQ+
Sbjct: 44 IKSPDGDVIDCIHVSHQPAFDHPDLKNHKIQM 75
>Glyma08g17180.3
Length = 406
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/32 (62%), Positives = 25/32 (78%)
Query: 10 LQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQV 41
++ DGDVIDC+ + QPAF HP LKNHKIQ+
Sbjct: 44 IKSPDGDVIDCIHVTHQPAFDHPDLKNHKIQM 75
>Glyma08g17180.2
Length = 415
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/32 (62%), Positives = 25/32 (78%)
Query: 10 LQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQV 41
++ DGDVIDC+ + QPAF HP LKNHKIQ+
Sbjct: 53 IKSPDGDVIDCIHVTHQPAFDHPDLKNHKIQM 84
>Glyma20g36380.1
Length = 442
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 8 LVLQVEDGDVIDCVDIYKQPAFSHPLLKNHKIQ 40
L ++ DGD+IDCV KQ A HPLLKNHKIQ
Sbjct: 72 LTIESPDGDLIDCVHKRKQLALDHPLLKNHKIQ 104
>Glyma02g04240.1
Length = 451
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/29 (65%), Positives = 23/29 (79%)
Query: 10 LQVEDGDVIDCVDIYKQPAFSHPLLKNHK 38
+Q DGDVIDCV ++QPAF HP+LK HK
Sbjct: 90 IQSPDGDVIDCVVSHQQPAFDHPMLKGHK 118
>Glyma01g03390.1
Length = 504
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/29 (65%), Positives = 23/29 (79%)
Query: 10 LQVEDGDVIDCVDIYKQPAFSHPLLKNHK 38
+Q DGDVIDCV ++QPAF HP+LK HK
Sbjct: 124 IQSPDGDVIDCVVSHQQPAFDHPMLKGHK 152
>Glyma14g22180.1
Length = 315
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/26 (69%), Positives = 22/26 (84%)
Query: 15 GDVIDCVDIYKQPAFSHPLLKNHKIQ 40
G ++DC+DI KQPAF HPLLK HK+Q
Sbjct: 4 GYIVDCIDINKQPAFDHPLLKYHKLQ 29