Jatropha Genome Database

JcCA0310221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0310221.10 - phase: 0 
         (260 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g02640.1                                                       433   e-122
Glyma08g23370.1                                                       433   e-121

>Glyma07g02640.1 
          Length = 258

 Score =  433 bits (1114), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 214/261 (81%), Positives = 235/261 (90%), Gaps = 4/261 (1%)

Query: 1   MSGQSQRLNVVPTVTMLAVMKARLVGATRGHALLKKKSDALTVQFRQILKKIVTAKESMG 60
           MSGQ+QRLNVVPTVTML V+KARLVGATRGHALLKKKSDALTVQFRQILKKIV+ KESMG
Sbjct: 1   MSGQTQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 60

Query: 61  DIMKSSAFALTEAKYVAGENVKHVVLENVQSASLKVRSRQENVAGVKLPKFEYFTEGE-T 119
           DIMK+S+FALTEAKYVAG+N+KHVVLENV+ ASL+VRSRQENVAGVKLPKF+Y  + + T
Sbjct: 61  DIMKTSSFALTEAKYVAGDNIKHVVLENVKEASLRVRSRQENVAGVKLPKFDYTADADAT 120

Query: 120 KNDLTGLARGGQQVQACRAAYIKSIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVK 179
           KNDLTGLARGGQQVQ CRAAYIK+IEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVK
Sbjct: 121 KNDLTGLARGGQQVQQCRAAYIKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVK 180

Query: 180 PRIENTINYIKGELDELEREDFFRLKKVQGYKKREIERQLXXXXXXXXXXXXXXVSLQKG 239
           PR+ENTI+YIKGELDELEREDFFRLKK+QGYKKREIERQ+              + L+KG
Sbjct: 181 PRLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQM---LQQNNSKLDTNLPLRKG 237

Query: 240 ISLKSAHNLLSVAEKDEDIIF 260
           +S  SAHNLLSV +KDEDIIF
Sbjct: 238 LSYNSAHNLLSVGDKDEDIIF 258


>Glyma08g23370.1 
          Length = 295

 Score =  433 bits (1113), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 214/261 (81%), Positives = 235/261 (90%), Gaps = 4/261 (1%)

Query: 1   MSGQSQRLNVVPTVTMLAVMKARLVGATRGHALLKKKSDALTVQFRQILKKIVTAKESMG 60
           MSGQ+QRLNVVPTVTML V+KARLVGATRGHALLKKKSDALTVQFRQILKKIV+ KESMG
Sbjct: 38  MSGQTQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMG 97

Query: 61  DIMKSSAFALTEAKYVAGENVKHVVLENVQSASLKVRSRQENVAGVKLPKFEYFTEGE-T 119
           DIMK+S+FALTEAKYVAG+N+KHVVLENV+ ASL+VRSRQENVAGVKLPKF+Y  + + T
Sbjct: 98  DIMKTSSFALTEAKYVAGDNIKHVVLENVKEASLRVRSRQENVAGVKLPKFDYTADADAT 157

Query: 120 KNDLTGLARGGQQVQACRAAYIKSIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVK 179
           KNDLTGLARGGQQVQ CRAAYIK+IEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVK
Sbjct: 158 KNDLTGLARGGQQVQQCRAAYIKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVK 217

Query: 180 PRIENTINYIKGELDELEREDFFRLKKVQGYKKREIERQLXXXXXXXXXXXXXXVSLQKG 239
           PR+ENTI+YIKGELDELEREDFFRLKK+QGYKKREIERQ+              + L+KG
Sbjct: 218 PRLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQM---LLQNNSNVETNLPLRKG 274

Query: 240 ISLKSAHNLLSVAEKDEDIIF 260
           +S  SAHNLLSV +KDEDIIF
Sbjct: 275 VSYNSAHNLLSVGDKDEDIIF 295