Jatropha Genome Database

JcCA0310141.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0310141.20 - phase: 2 /pseudo
         (329 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g08930.1                                                       346   2e-95
Glyma16g08930.2                                                       343   1e-94
Glyma03g22930.1                                                       343   1e-94
Glyma03g22930.2                                                       339   2e-93
Glyma16g21180.1                                                        69   9e-12

>Glyma16g08930.1 
          Length = 332

 Score =  346 bits (888), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 166/240 (69%), Positives = 193/240 (80%), Gaps = 2/240 (0%)

Query: 90  LQELSHWNAQYKEKFGFIFLICASGRSTTEILAELKKRYQNRPIVEFEIAAQEQMKITEL 149
           LQELS WNA+Y+EKFGF+FLICA+GRST EILAELK+RY NRPIVEFEIAAQEQMKITEL
Sbjct: 95  LQELSEWNARYREKFGFVFLICAAGRSTDEILAELKRRYTNRPIVEFEIAAQEQMKITEL 154

Query: 150 RLGKLFSTKINAASTGNQHSTSFGAKAEEDRVGIIGGHLTAALNFSSGKASQXXXXXXXX 209
           RL KLFS++ N +S+ +++S +   KAEEDR+ IIGGH+TAA   S+ K           
Sbjct: 155 RLAKLFSSRENISSSVDKYSAA--KKAEEDRISIIGGHVTAASEISTAKLIHHPARTRPP 212

Query: 210 XXXHVLDVSRGCPAGGVEVCLEMWNGTQPRPLFGEIGVDSWVVQGASTTDADGRCGQLMS 269
              HVLDVS+G PA G+EV LE+W GTQ RP FG  G  SWV QG+STTD DGR GQL+S
Sbjct: 213 ITTHVLDVSQGSPAAGIEVLLEVWRGTQSRPTFGASGGGSWVFQGSSTTDLDGRSGQLLS 272

Query: 270 MVDVVNPGIYRISFNTGKYCPSGFFPYVSIVFEIREAQNREHFHVPLLFSPFSFTTYRGS 329
           +VD VNPGIYRISFNTGKY P+GFFPYVS+VFEI+E+Q REHFHVPLL SPFSF+TYRGS
Sbjct: 273 IVDDVNPGIYRISFNTGKYIPNGFFPYVSLVFEIKESQKREHFHVPLLLSPFSFSTYRGS 332


>Glyma16g08930.2 
          Length = 331

 Score =  343 bits (881), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 165/240 (68%), Positives = 191/240 (79%), Gaps = 3/240 (1%)

Query: 90  LQELSHWNAQYKEKFGFIFLICASGRSTTEILAELKKRYQNRPIVEFEIAAQEQMKITEL 149
           LQELS WNA+Y+EKFGF+FLICA+GRST EILAELK+RY NRPIVEFEIAAQEQMKITEL
Sbjct: 95  LQELSEWNARYREKFGFVFLICAAGRSTDEILAELKRRYTNRPIVEFEIAAQEQMKITEL 154

Query: 150 RLGKLFSTKINAASTGNQHSTSFGAKAEEDRVGIIGGHLTAALNFSSGKASQXXXXXXXX 209
           RL KLFS++ N +S+ +++S    AK  EDR+ IIGGH+TAA   S+ K           
Sbjct: 155 RLAKLFSSRENISSSVDKYS---AAKKAEDRISIIGGHVTAASEISTAKLIHHPARTRPP 211

Query: 210 XXXHVLDVSRGCPAGGVEVCLEMWNGTQPRPLFGEIGVDSWVVQGASTTDADGRCGQLMS 269
              HVLDVS+G PA G+EV LE+W GTQ RP FG  G  SWV QG+STTD DGR GQL+S
Sbjct: 212 ITTHVLDVSQGSPAAGIEVLLEVWRGTQSRPTFGASGGGSWVFQGSSTTDLDGRSGQLLS 271

Query: 270 MVDVVNPGIYRISFNTGKYCPSGFFPYVSIVFEIREAQNREHFHVPLLFSPFSFTTYRGS 329
           +VD VNPGIYRISFNTGKY P+GFFPYVS+VFEI+E+Q REHFHVPLL SPFSF+TYRGS
Sbjct: 272 IVDDVNPGIYRISFNTGKYIPNGFFPYVSLVFEIKESQKREHFHVPLLLSPFSFSTYRGS 331


>Glyma03g22930.1 
          Length = 332

 Score =  343 bits (880), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 163/240 (67%), Positives = 193/240 (80%), Gaps = 2/240 (0%)

Query: 90  LQELSHWNAQYKEKFGFIFLICASGRSTTEILAELKKRYQNRPIVEFEIAAQEQMKITEL 149
           LQELS WNA+Y+EKFGF+FLICA+GRST EILAELK+RY NRPIVEFEIAA+EQMKITEL
Sbjct: 95  LQELSEWNARYREKFGFVFLICAAGRSTDEILAELKRRYTNRPIVEFEIAAREQMKITEL 154

Query: 150 RLGKLFSTKINAASTGNQHSTSFGAKAEEDRVGIIGGHLTAALNFSSGKASQXXXXXXXX 209
           RL KLFS++ N +ST +++ST+   KAEEDR+ II  H+TA    S+GK+ Q        
Sbjct: 155 RLAKLFSSRENISSTADKNSTA--RKAEEDRISIISSHMTATSESSTGKSIQHPARTRPP 212

Query: 210 XXXHVLDVSRGCPAGGVEVCLEMWNGTQPRPLFGEIGVDSWVVQGASTTDADGRCGQLMS 269
              HVLDVSRG PA G++V LE+W GTQ +P FG  G  SWV QG+S TD+DGR GQL+S
Sbjct: 213 ITTHVLDVSRGAPAAGIDVLLEVWRGTQSQPTFGATGGGSWVFQGSSKTDSDGRSGQLLS 272

Query: 270 MVDVVNPGIYRISFNTGKYCPSGFFPYVSIVFEIREAQNREHFHVPLLFSPFSFTTYRGS 329
           +VD  +PGIYRISFNTGKY P+GFFPYVSIVFEI+E+Q REHFHVPLL SPFSF+TYRGS
Sbjct: 273 IVDEASPGIYRISFNTGKYIPNGFFPYVSIVFEIKESQKREHFHVPLLLSPFSFSTYRGS 332


>Glyma03g22930.2 
          Length = 331

 Score =  339 bits (870), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 161/240 (67%), Positives = 191/240 (79%), Gaps = 3/240 (1%)

Query: 90  LQELSHWNAQYKEKFGFIFLICASGRSTTEILAELKKRYQNRPIVEFEIAAQEQMKITEL 149
           LQELS WNA+Y+EKFGF+FLICA+GRST EILAELK+RY NRPIVEFEIAA+EQMKITEL
Sbjct: 95  LQELSEWNARYREKFGFVFLICAAGRSTDEILAELKRRYTNRPIVEFEIAAREQMKITEL 154

Query: 150 RLGKLFSTKINAASTGNQHSTSFGAKAEEDRVGIIGGHLTAALNFSSGKASQXXXXXXXX 209
           RL KLFS++ N +ST +++ST   A+  EDR+ II  H+TA    S+GK+ Q        
Sbjct: 155 RLAKLFSSRENISSTADKNST---ARKAEDRISIISSHMTATSESSTGKSIQHPARTRPP 211

Query: 210 XXXHVLDVSRGCPAGGVEVCLEMWNGTQPRPLFGEIGVDSWVVQGASTTDADGRCGQLMS 269
              HVLDVSRG PA G++V LE+W GTQ +P FG  G  SWV QG+S TD+DGR GQL+S
Sbjct: 212 ITTHVLDVSRGAPAAGIDVLLEVWRGTQSQPTFGATGGGSWVFQGSSKTDSDGRSGQLLS 271

Query: 270 MVDVVNPGIYRISFNTGKYCPSGFFPYVSIVFEIREAQNREHFHVPLLFSPFSFTTYRGS 329
           +VD  +PGIYRISFNTGKY P+GFFPYVSIVFEI+E+Q REHFHVPLL SPFSF+TYRGS
Sbjct: 272 IVDEASPGIYRISFNTGKYIPNGFFPYVSIVFEIKESQKREHFHVPLLLSPFSFSTYRGS 331


>Glyma16g21180.1 
          Length = 48

 Score = 68.6 bits (166), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/41 (78%), Positives = 37/41 (90%)

Query: 124 LKKRYQNRPIVEFEIAAQEQMKITELRLGKLFSTKINAAST 164
           L++RY NRPIVEFEIAAQEQMKITELRL KLFS++ N +ST
Sbjct: 5   LQRRYTNRPIVEFEIAAQEQMKITELRLAKLFSSRENISST 45