Jatropha Genome Database
- JcCA0309961.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0309961.30 - phase: 2 /pseudo/partial
(93 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g14180.1 87 5e-18
Glyma01g42410.1 86 6e-18
Glyma05g03650.1 86 1e-17
Glyma11g02960.1 79 8e-16
Glyma17g32980.1 64 3e-11
Glyma17g32980.2 64 3e-11
Glyma14g13750.1 64 3e-11
Glyma14g13750.2 64 4e-11
Glyma06g06890.1 62 1e-10
Glyma04g06810.1 62 1e-10
Glyma06g06890.2 62 1e-10
Glyma07g11780.1 60 4e-10
Glyma17g11330.3 60 5e-10
Glyma17g11330.1 60 5e-10
Glyma13g22530.2 60 5e-10
Glyma13g22530.1 60 5e-10
Glyma17g11330.2 60 6e-10
Glyma09g12820.1 60 6e-10
Glyma14g14060.1 57 6e-09
>Glyma17g14180.1
Length = 292
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 43/46 (93%)
Query: 48 LQMDFSLDQPSVDGHDLMGFGPLIPTESERSLMERVRQELKIELKQ 93
LQMD SLDQ S DGHD+MGFGPL+PTESERSLMERVRQELKIELKQ
Sbjct: 153 LQMDGSLDQSSADGHDMMGFGPLLPTESERSLMERVRQELKIELKQ 198
>Glyma01g42410.1
Length = 281
Score = 86.3 bits (212), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 43/46 (93%)
Query: 48 LQMDFSLDQPSVDGHDLMGFGPLIPTESERSLMERVRQELKIELKQ 93
LQMD SLDQ S +GHD+MGFGPL+PTESERSLMERVRQELKIELKQ
Sbjct: 146 LQMDISLDQSSAEGHDMMGFGPLLPTESERSLMERVRQELKIELKQ 191
>Glyma05g03650.1
Length = 293
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/46 (89%), Positives = 43/46 (93%)
Query: 48 LQMDFSLDQPSVDGHDLMGFGPLIPTESERSLMERVRQELKIELKQ 93
LQMD SLDQ S +GHDLMGFGPL+PTESERSLMERVRQELKIELKQ
Sbjct: 154 LQMDGSLDQSSAEGHDLMGFGPLLPTESERSLMERVRQELKIELKQ 199
>Glyma11g02960.1
Length = 279
Score = 79.3 bits (194), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/46 (84%), Positives = 42/46 (91%), Gaps = 2/46 (4%)
Query: 48 LQMDFSLDQPSVDGHDLMGFGPLIPTESERSLMERVRQELKIELKQ 93
LQMDFSLDQ S +GHD+MGFG +PTESERSLMERVRQELKIELKQ
Sbjct: 146 LQMDFSLDQSSAEGHDMMGFG--LPTESERSLMERVRQELKIELKQ 189
>Glyma17g32980.1
Length = 411
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 35/43 (81%)
Query: 51 DFSLDQPSVDGHDLMGFGPLIPTESERSLMERVRQELKIELKQ 93
D +L S DG D MGFGPL+PTESERSLMERVRQELK ELKQ
Sbjct: 273 DANLFDCSFDGADSMGFGPLVPTESERSLMERVRQELKHELKQ 315
>Glyma17g32980.2
Length = 405
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 35/43 (81%)
Query: 51 DFSLDQPSVDGHDLMGFGPLIPTESERSLMERVRQELKIELKQ 93
D +L S DG D MGFGPL+PTESERSLMERVRQELK ELKQ
Sbjct: 273 DANLFDCSFDGADSMGFGPLVPTESERSLMERVRQELKHELKQ 315
>Glyma14g13750.1
Length = 412
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 32/36 (88%)
Query: 58 SVDGHDLMGFGPLIPTESERSLMERVRQELKIELKQ 93
S DG D MGFGPL+PTESERSLMERVRQELK ELKQ
Sbjct: 282 SFDGADGMGFGPLVPTESERSLMERVRQELKHELKQ 317
>Glyma14g13750.2
Length = 407
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 32/36 (88%)
Query: 58 SVDGHDLMGFGPLIPTESERSLMERVRQELKIELKQ 93
S DG D MGFGPL+PTESERSLMERVRQELK ELKQ
Sbjct: 282 SFDGADGMGFGPLVPTESERSLMERVRQELKHELKQ 317
>Glyma06g06890.1
Length = 410
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 35/43 (81%)
Query: 51 DFSLDQPSVDGHDLMGFGPLIPTESERSLMERVRQELKIELKQ 93
D +L ++DG D MGFGPLIPTE+ERSLMERVR ELK ELKQ
Sbjct: 267 DANLFDGALDGPDSMGFGPLIPTENERSLMERVRHELKHELKQ 309
>Glyma04g06810.1
Length = 399
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 35/43 (81%)
Query: 51 DFSLDQPSVDGHDLMGFGPLIPTESERSLMERVRQELKIELKQ 93
D +L ++DG D MGFGPLIPTE+ERSLMERVR ELK ELKQ
Sbjct: 266 DANLFDGALDGPDSMGFGPLIPTENERSLMERVRHELKHELKQ 308
>Glyma06g06890.2
Length = 400
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 35/43 (81%)
Query: 51 DFSLDQPSVDGHDLMGFGPLIPTESERSLMERVRQELKIELKQ 93
D +L ++DG D MGFGPLIPTE+ERSLMERVR ELK ELKQ
Sbjct: 267 DANLFDGALDGPDSMGFGPLIPTENERSLMERVRHELKHELKQ 309
>Glyma07g11780.1
Length = 255
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%)
Query: 51 DFSLDQPSVDGHDLMGFGPLIPTESERSLMERVRQELKIELKQ 93
D +L ++DG D MGFGPLIPTE+ERSLMERVR E+K ELKQ
Sbjct: 16 DANLFDGALDGPDSMGFGPLIPTENERSLMERVRHEVKHELKQ 58
>Glyma17g11330.3
Length = 344
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 53 SLDQPSVDGHDLMGFGPLIPTESERSLMERVRQELKIELKQ 93
+L + S+DG + +GFGPL+PTESERSLMERVR ELK ELKQ
Sbjct: 203 NLYEGSLDGGETLGFGPLVPTESERSLMERVRHELKHELKQ 243
>Glyma17g11330.1
Length = 345
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 53 SLDQPSVDGHDLMGFGPLIPTESERSLMERVRQELKIELKQ 93
+L + S+DG + +GFGPL+PTESERSLMERVR ELK ELKQ
Sbjct: 203 NLYEGSLDGGETLGFGPLVPTESERSLMERVRHELKHELKQ 243
>Glyma13g22530.2
Length = 345
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 53 SLDQPSVDGHDLMGFGPLIPTESERSLMERVRQELKIELKQ 93
+L + S+DG + +GFGPL+PTESERSLMERVR ELK ELKQ
Sbjct: 204 NLYEGSLDGGETLGFGPLVPTESERSLMERVRHELKHELKQ 244
>Glyma13g22530.1
Length = 346
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 53 SLDQPSVDGHDLMGFGPLIPTESERSLMERVRQELKIELKQ 93
+L + S+DG + +GFGPL+PTESERSLMERVR ELK ELKQ
Sbjct: 204 NLYEGSLDGGETLGFGPLVPTESERSLMERVRHELKHELKQ 244
>Glyma17g11330.2
Length = 337
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 53 SLDQPSVDGHDLMGFGPLIPTESERSLMERVRQELKIELKQ 93
+L + S+DG + +GFGPL+PTESERSLMERVR ELK ELKQ
Sbjct: 203 NLYEGSLDGGETLGFGPLVPTESERSLMERVRHELKHELKQ 243
>Glyma09g12820.1
Length = 369
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 26 SPRG*SGHGLPGN*EHLTSSNCLQMDFSLDQPSVDGHDLMGFGPLIPTESERSLMERVRQ 85
SP +G + N E SN +L + +DG D + FGPL+PTE+ERSLMERVRQ
Sbjct: 205 SPGEGTGATMSDNEEDQAESNA-----NLYEGGMDGADSLSFGPLVPTETERSLMERVRQ 259
Query: 86 ELKIELKQ 93
ELK ELKQ
Sbjct: 260 ELKHELKQ 267
>Glyma14g14060.1
Length = 165
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 51 DFSLDQPSVDGHDLMGFGPLIPTESERSLMERVRQELKIELKQ 93
D +L ++DG D MGFGPLIPTE+ERSL ERVR E+K ELKQ
Sbjct: 29 DANLFDGALDGPDSMGFGPLIPTENERSLTERVRPEVKHELKQ 71