Jatropha Genome Database

JcCA0309311.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0309311.10 - phase: 0 /partial
         (88 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g04290.1                                                       101   2e-22
Glyma15g04290.2                                                       100   3e-22
Glyma13g41120.1                                                       100   3e-22
Glyma10g06740.1                                                        64   3e-11
Glyma13g20930.1                                                        63   6e-11
Glyma19g36990.1                                                        62   1e-10
Glyma19g36990.2                                                        62   1e-10
Glyma03g34300.1                                                        62   1e-10

>Glyma15g04290.1 
          Length = 253

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 50/79 (63%), Positives = 52/79 (65%)

Query: 1  MGRKFFVGGNWKCNGTTEEVKKIVTTLNEAXXXXXXXXXXXXXXXXXXXXXXXXXXRPDF 60
          MGRKFFVGGNWKCNGTTEEVKKIVTTLNEA                          RPDF
Sbjct: 1  MGRKFFVGGNWKCNGTTEEVKKIVTTLNEAKVPGEDVVEVVVSPPFVFLPVVKSLLRPDF 60

Query: 61 QVAAQNCWVRKGGAFTGEV 79
           V+AQNCWVRKGGA+TGEV
Sbjct: 61 HVSAQNCWVRKGGAYTGEV 79


>Glyma15g04290.2 
          Length = 191

 Score =  100 bits (250), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 50/80 (62%), Positives = 52/80 (65%)

Query: 1  MGRKFFVGGNWKCNGTTEEVKKIVTTLNEAXXXXXXXXXXXXXXXXXXXXXXXXXXRPDF 60
          MGRKFFVGGNWKCNGTTEEVKKIVTTLNEA                          RPDF
Sbjct: 1  MGRKFFVGGNWKCNGTTEEVKKIVTTLNEAKVPGEDVVEVVVSPPFVFLPVVKSLLRPDF 60

Query: 61 QVAAQNCWVRKGGAFTGEVR 80
           V+AQNCWVRKGGA+TGEV 
Sbjct: 61 HVSAQNCWVRKGGAYTGEVS 80


>Glyma13g41120.1 
          Length = 246

 Score =  100 bits (249), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 50/79 (63%), Positives = 52/79 (65%)

Query: 1   MGRKFFVGGNWKCNGTTEEVKKIVTTLNEAXXXXXXXXXXXXXXXXXXXXXXXXXXRPDF 60
           MGRKFFVGGNWKCNGTTEEVKKIVTTLNEA                          RPDF
Sbjct: 36  MGRKFFVGGNWKCNGTTEEVKKIVTTLNEAKVPGEDVVEVVVSPPFVFLPFVKSLLRPDF 95

Query: 61  QVAAQNCWVRKGGAFTGEV 79
            V+AQNCWVRKGGA+TGEV
Sbjct: 96  HVSAQNCWVRKGGAYTGEV 114


>Glyma10g06740.1 
          Length = 304

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 4   KFFVGGNWKCNGTTEEVKKIVTTLNEAXXXXXXXXXXXXXXXXXXXXXXXXXXRPDFQVA 63
           KFFVGGNWKCNGT + ++K+V+ LN A                          R   +++
Sbjct: 54  KFFVGGNWKCNGTKDSIRKLVSDLNSATLESDVDVVVAPPFVYIDQVKNSITDR--IEIS 111

Query: 64  AQNCWVRKGGAFTGEV 79
           AQN WV KGGAFTGE+
Sbjct: 112 AQNSWVGKGGAFTGEI 127


>Glyma13g20930.1 
          Length = 305

 Score = 63.2 bits (152), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/76 (42%), Positives = 40/76 (52%), Gaps = 2/76 (2%)

Query: 4   KFFVGGNWKCNGTTEEVKKIVTTLNEAXXXXXXXXXXXXXXXXXXXXXXXXXXRPDFQVA 63
           KFFVGGNWKCNGT + + K+V+ LN A                          R   +++
Sbjct: 55  KFFVGGNWKCNGTKDSISKLVSDLNSATLEPDVDVVVAPPFVYIDQVKNSITDR--IEIS 112

Query: 64  AQNCWVRKGGAFTGEV 79
           AQN WV KGGAFTGE+
Sbjct: 113 AQNSWVGKGGAFTGEI 128


>Glyma19g36990.1 
          Length = 309

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/76 (42%), Positives = 39/76 (51%), Gaps = 2/76 (2%)

Query: 4   KFFVGGNWKCNGTTEEVKKIVTTLNEAXXXXXXXXXXXXXXXXXXXXXXXXXXRPDFQVA 63
           KFFVGGNWKCNGT + + K+V  LN A                          R   +++
Sbjct: 59  KFFVGGNWKCNGTKDSISKLVADLNSAKLEPDVDVVVAPPFLYIDQVKNSLTER--IEIS 116

Query: 64  AQNCWVRKGGAFTGEV 79
           AQN WV KGGAFTGE+
Sbjct: 117 AQNSWVGKGGAFTGEI 132


>Glyma19g36990.2 
          Length = 306

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/76 (42%), Positives = 39/76 (51%), Gaps = 2/76 (2%)

Query: 4   KFFVGGNWKCNGTTEEVKKIVTTLNEAXXXXXXXXXXXXXXXXXXXXXXXXXXRPDFQVA 63
           KFFVGGNWKCNGT + + K+V  LN A                          R   +++
Sbjct: 59  KFFVGGNWKCNGTKDSISKLVADLNSAKLEPDVDVVVAPPFLYIDQVKNSLTER--IEIS 116

Query: 64  AQNCWVRKGGAFTGEV 79
           AQN WV KGGAFTGE+
Sbjct: 117 AQNSWVGKGGAFTGEI 132


>Glyma03g34300.1 
          Length = 309

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/76 (42%), Positives = 39/76 (51%), Gaps = 2/76 (2%)

Query: 4   KFFVGGNWKCNGTTEEVKKIVTTLNEAXXXXXXXXXXXXXXXXXXXXXXXXXXRPDFQVA 63
           KFFVGGNWKCNGT + + K+V  LN A                          R   +++
Sbjct: 59  KFFVGGNWKCNGTKDSISKLVADLNNAKLEPDVDVVVAPPFLYIDQVKNSLTER--IEIS 116

Query: 64  AQNCWVRKGGAFTGEV 79
           AQN WV KGGAFTGE+
Sbjct: 117 AQNSWVGKGGAFTGEI 132