Jatropha Genome Database

JcCA0309221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0309221.10 + phase: 0 /pseudo
         (181 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g13540.1                                                       247   6e-66
Glyma06g36690.3                                                       243   7e-65
Glyma06g36690.2                                                       243   7e-65
Glyma06g36690.1                                                       243   7e-65

>Glyma05g13540.1 
          Length = 175

 Score =  247 bits (630), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 126/175 (72%), Positives = 141/175 (80%), Gaps = 7/175 (4%)

Query: 9   DQKKRIVFVTVGT---NTIRCSCESGGYKGS*TKNCLEEGILISLFKMGRGSYTPTKSEG 65
           D  +R+VFVTVGT   + +  + +S   K    K    +G    L +MGRGSY PTKSEG
Sbjct: 5   DMTERVVFVTVGTTCFDALVRAIDSDNVK----KALFAKGYTHLLIQMGRGSYLPTKSEG 60

Query: 66  EDGSVAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRLHKPLIVVVNEDLMDNHQTE 125
           +D S+AVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRL KPL+VVVN+DLMDNHQ+E
Sbjct: 61  DDCSLAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRLGKPLVVVVNQDLMDNHQSE 120

Query: 126 LAEELAERKHLYCARPQTIHHTIADMDLESLLPYPAGDATPVAKLINRFLGFPDD 180
           LAEELA+RKHLYCA PQT+H TIADMDL SLLPY  GDATPVAK INRFLGFPDD
Sbjct: 121 LAEELADRKHLYCASPQTLHQTIADMDLSSLLPYSPGDATPVAKHINRFLGFPDD 175


>Glyma06g36690.3 
          Length = 177

 Score =  243 bits (621), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 128/183 (69%), Positives = 144/183 (78%), Gaps = 9/183 (4%)

Query: 1   MGDGEATVDQKKRIVFVTVGT---NTIRCSCESGGYKGS*TKNCLEEGILISLFKMGRGS 57
           MG+ E   D+KKR+VFVTVGT   + +  + +S   K    +    +G    L +MGRGS
Sbjct: 1   MGNDEGN-DKKKRVVFVTVGTTCFDALVRAVDSNNVK----QALFAKGYTHLLIQMGRGS 55

Query: 58  YTPTKSEGEDGSVAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRLHKPLIVVVNED 117
           Y PTKSEG DGS+AVDYFTFSSSIADHLRSASLVISHAGSGSIFETL+L KPLIVVVNED
Sbjct: 56  YLPTKSEG-DGSLAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLQLGKPLIVVVNED 114

Query: 118 LMDNHQTELAEELAERKHLYCARPQTIHHTIADMDLESLLPYPAGDATPVAKLINRFLGF 177
           LMDNHQ+ELAEELA+RKHLYCA PQT+H TIA+MDL SL PY  GDATPVAK IN  LGF
Sbjct: 115 LMDNHQSELAEELADRKHLYCASPQTLHQTIANMDLSSLFPYSPGDATPVAKHINNLLGF 174

Query: 178 PDD 180
           PDD
Sbjct: 175 PDD 177


>Glyma06g36690.2 
          Length = 177

 Score =  243 bits (621), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 128/183 (69%), Positives = 144/183 (78%), Gaps = 9/183 (4%)

Query: 1   MGDGEATVDQKKRIVFVTVGT---NTIRCSCESGGYKGS*TKNCLEEGILISLFKMGRGS 57
           MG+ E   D+KKR+VFVTVGT   + +  + +S   K    +    +G    L +MGRGS
Sbjct: 1   MGNDEGN-DKKKRVVFVTVGTTCFDALVRAVDSNNVK----QALFAKGYTHLLIQMGRGS 55

Query: 58  YTPTKSEGEDGSVAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRLHKPLIVVVNED 117
           Y PTKSEG DGS+AVDYFTFSSSIADHLRSASLVISHAGSGSIFETL+L KPLIVVVNED
Sbjct: 56  YLPTKSEG-DGSLAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLQLGKPLIVVVNED 114

Query: 118 LMDNHQTELAEELAERKHLYCARPQTIHHTIADMDLESLLPYPAGDATPVAKLINRFLGF 177
           LMDNHQ+ELAEELA+RKHLYCA PQT+H TIA+MDL SL PY  GDATPVAK IN  LGF
Sbjct: 115 LMDNHQSELAEELADRKHLYCASPQTLHQTIANMDLSSLFPYSPGDATPVAKHINNLLGF 174

Query: 178 PDD 180
           PDD
Sbjct: 175 PDD 177


>Glyma06g36690.1 
          Length = 177

 Score =  243 bits (621), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 128/183 (69%), Positives = 144/183 (78%), Gaps = 9/183 (4%)

Query: 1   MGDGEATVDQKKRIVFVTVGT---NTIRCSCESGGYKGS*TKNCLEEGILISLFKMGRGS 57
           MG+ E   D+KKR+VFVTVGT   + +  + +S   K    +    +G    L +MGRGS
Sbjct: 1   MGNDEGN-DKKKRVVFVTVGTTCFDALVRAVDSNNVK----QALFAKGYTHLLIQMGRGS 55

Query: 58  YTPTKSEGEDGSVAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRLHKPLIVVVNED 117
           Y PTKSEG DGS+AVDYFTFSSSIADHLRSASLVISHAGSGSIFETL+L KPLIVVVNED
Sbjct: 56  YLPTKSEG-DGSLAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLQLGKPLIVVVNED 114

Query: 118 LMDNHQTELAEELAERKHLYCARPQTIHHTIADMDLESLLPYPAGDATPVAKLINRFLGF 177
           LMDNHQ+ELAEELA+RKHLYCA PQT+H TIA+MDL SL PY  GDATPVAK IN  LGF
Sbjct: 115 LMDNHQSELAEELADRKHLYCASPQTLHQTIANMDLSSLFPYSPGDATPVAKHINNLLGF 174

Query: 178 PDD 180
           PDD
Sbjct: 175 PDD 177