Jatropha Genome Database

JcCA0309141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0309141.10 - phase: 0 /pseudo/partial
         (233 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g04780.1                                                       159   3e-39
Glyma16g22640.1                                                       159   3e-39
Glyma11g08920.1                                                       158   5e-39
Glyma14g00500.1                                                       155   3e-38
Glyma13g20790.1                                                       101   7e-22
Glyma10g06590.1                                                       101   8e-22
Glyma10g06590.2                                                       101   9e-22
Glyma15g00780.1                                                        58   9e-09
Glyma15g00780.2                                                        57   2e-08
Glyma11g08370.1                                                        54   2e-07
Glyma13g44490.1                                                        54   2e-07

>Glyma02g04780.1 
          Length = 364

 Score =  159 bits (401), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 74/88 (84%), Positives = 76/88 (86%)

Query: 117 LNNRKKVTAVHKANIMKLADGLFLESCREVSSKYPGIKYNEIIVDNCCMQLVSKPEQFDV 176
           LNNRKKVTAVHKANIMKLADGLFLESCREV++KYPGIKYNEIIVDNCCMQLVSKPEQFDV
Sbjct: 187 LNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDV 246

Query: 177 MVTPNLYGNLVXXXXXXXXXXXXVMPGG 204
           MVTPNLYGNLV            VMPGG
Sbjct: 247 MVTPNLYGNLVANTAAGIAGGTGVMPGG 274


>Glyma16g22640.1 
          Length = 363

 Score =  159 bits (401), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 74/88 (84%), Positives = 76/88 (86%)

Query: 117 LNNRKKVTAVHKANIMKLADGLFLESCREVSSKYPGIKYNEIIVDNCCMQLVSKPEQFDV 176
           LNNRKKVTAVHKANIMKLADGLFLESCREV++KYPGIKYNEIIVDNCCMQLVSKPEQFDV
Sbjct: 186 LNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDV 245

Query: 177 MVTPNLYGNLVXXXXXXXXXXXXVMPGG 204
           MVTPNLYGNLV            VMPGG
Sbjct: 246 MVTPNLYGNLVANTAAGIAGGTGVMPGG 273


>Glyma11g08920.1 
          Length = 364

 Score =  158 bits (400), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 73/88 (82%), Positives = 76/88 (86%)

Query: 117 LNNRKKVTAVHKANIMKLADGLFLESCREVSSKYPGIKYNEIIVDNCCMQLVSKPEQFDV 176
           LNNRKKVTAVHKANIMKLADGLFLESCREV+++YPGIKYNEIIVDNCCMQLVSKPEQFDV
Sbjct: 187 LNNRKKVTAVHKANIMKLADGLFLESCREVATRYPGIKYNEIIVDNCCMQLVSKPEQFDV 246

Query: 177 MVTPNLYGNLVXXXXXXXXXXXXVMPGG 204
           MVTPNLYGNLV            VMPGG
Sbjct: 247 MVTPNLYGNLVANTAAGIAGGTGVMPGG 274


>Glyma14g00500.1 
          Length = 366

 Score =  155 bits (393), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 72/88 (81%), Positives = 75/88 (85%)

Query: 117 LNNRKKVTAVHKANIMKLADGLFLESCREVSSKYPGIKYNEIIVDNCCMQLVSKPEQFDV 176
           LNNRK+VTAVHKANIMKLADGLFLESCR V++KYPGIKYNEIIVDNCCMQLVSKPEQFDV
Sbjct: 189 LNNRKQVTAVHKANIMKLADGLFLESCRHVATKYPGIKYNEIIVDNCCMQLVSKPEQFDV 248

Query: 177 MVTPNLYGNLVXXXXXXXXXXXXVMPGG 204
           MVTPNLYGNLV            VMPGG
Sbjct: 249 MVTPNLYGNLVANTAAGIAGGTGVMPGG 276


>Glyma13g20790.1 
          Length = 361

 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 41/70 (58%), Positives = 56/70 (80%)

Query: 118 NNRKKVTAVHKANIMKLADGLFLESCREVSSKYPGIKYNEIIVDNCCMQLVSKPEQFDVM 177
           + R++V+A+HKANIM+  DGLFL+ CREV+ KYP I Y E+++DNCCM LV  P  FDV+
Sbjct: 189 HGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPALFDVL 248

Query: 178 VTPNLYGNLV 187
           V PNLYG+++
Sbjct: 249 VMPNLYGDII 258


>Glyma10g06590.1 
          Length = 359

 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 41/70 (58%), Positives = 56/70 (80%)

Query: 118 NNRKKVTAVHKANIMKLADGLFLESCREVSSKYPGIKYNEIIVDNCCMQLVSKPEQFDVM 177
           + R++V+A+HKANIM+  DGLFL+ CREV+ KYP I Y E+++DNCCM LV  P  FDV+
Sbjct: 187 HGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPALFDVL 246

Query: 178 VTPNLYGNLV 187
           V PNLYG+++
Sbjct: 247 VMPNLYGDII 256


>Glyma10g06590.2 
          Length = 289

 Score =  101 bits (251), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 41/70 (58%), Positives = 56/70 (80%)

Query: 118 NNRKKVTAVHKANIMKLADGLFLESCREVSSKYPGIKYNEIIVDNCCMQLVSKPEQFDVM 177
           + R++V+A+HKANIM+  DGLFL+ CREV+ KYP I Y E+++DNCCM LV  P  FDV+
Sbjct: 187 HGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPALFDVL 246

Query: 178 VTPNLYGNLV 187
           V PNLYG+++
Sbjct: 247 VMPNLYGDII 256


>Glyma15g00780.1 
          Length = 435

 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 16/125 (12%)

Query: 120 RKKVTAVHKANIMKLADGLFLESCREVSSKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVT 179
           R+K+ +V KAN+++ A  L+ +    ++ +YP ++ + + VDN  MQL+  P+QFD MVT
Sbjct: 225 RRKLCSVDKANVLE-ASMLWRKRFLAIAQEYPDVELSHMYVDNASMQLIRDPKQFDTMVT 283

Query: 180 PNLYGNLVXXXXXXXXXXXXVMPG---------------GISTNIICCRTLCFFNVFLFA 224
            N++G+++            ++P                G + +I     + +F  F FA
Sbjct: 284 NNIFGDILSDEASMVTGSIGMLPSASLGASGPGLFEPIHGSAPDIAGQVGVFYFRFFSFA 343

Query: 225 VLELV 229
             +++
Sbjct: 344 STDML 348


>Glyma15g00780.2 
          Length = 409

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 47/68 (69%), Gaps = 1/68 (1%)

Query: 120 RKKVTAVHKANIMKLADGLFLESCREVSSKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVT 179
           R+K+ +V KAN+++ A  L+ +    ++ +YP ++ + + VDN  MQL+  P+QFD MVT
Sbjct: 225 RRKLCSVDKANVLE-ASMLWRKRFLAIAQEYPDVELSHMYVDNASMQLIRDPKQFDTMVT 283

Query: 180 PNLYGNLV 187
            N++G+++
Sbjct: 284 NNIFGDIL 291


>Glyma11g08370.1 
          Length = 405

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 45/66 (68%), Gaps = 1/66 (1%)

Query: 122 KVTAVHKANIMKLADGLFLESCREVSSKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPN 181
           K+ +V KAN+++ A  L+ +    ++ +YP ++ + + VDN  MQL+  P+QFD MVT N
Sbjct: 223 KLCSVDKANVLE-ASMLWRKRFLAIAQEYPDVELSHMYVDNASMQLIRDPKQFDTMVTNN 281

Query: 182 LYGNLV 187
           ++G+++
Sbjct: 282 IFGDIL 287


>Glyma13g44490.1 
          Length = 405

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 45/66 (68%), Gaps = 1/66 (1%)

Query: 122 KVTAVHKANIMKLADGLFLESCREVSSKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPN 181
           K+ +V KAN+++ A  L+ +    ++ +YP ++ + + VDN  MQL+  P+QFD MVT N
Sbjct: 223 KLCSVDKANVLE-ASMLWRKRFLAIAQEYPDVELSHMYVDNASMQLIRNPKQFDTMVTNN 281

Query: 182 LYGNLV 187
           ++G+++
Sbjct: 282 IFGDIL 287