Jatropha Genome Database

JcCA0308991.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0308991.10 - phase: 0 /partial
         (211 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g39490.1                                                       310   9e-85
Glyma06g15360.1                                                       307   6e-84
Glyma06g15360.2                                                       284   4e-77
Glyma09g32480.1                                                       258   4e-69
Glyma07g09300.1                                                       257   5e-69
Glyma14g08210.1                                                       216   1e-56
Glyma20g16930.1                                                       154   8e-38
Glyma06g37800.1                                                        65   5e-11
Glyma17g19010.1                                                        62   4e-10

>Glyma04g39490.1 
          Length = 258

 Score =  310 bits (793), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 159/226 (70%), Positives = 170/226 (75%), Gaps = 16/226 (7%)

Query: 1   MPEEKEESTSIPLSHAENGG-EEPEDPAKXXXXXXXXXTRE--------------MTGCV 45
           M EEKE STSIPLS  EN   ++PEDPAK         TR+              MTGCV
Sbjct: 1   MAEEKE-STSIPLSQGENASRDDPEDPAKSPPSSPNSSTRKACCFVLQSWVSKKFMTGCV 59

Query: 46  VLFPIAVTFFITWWLIQFVDGFFSPIYERLGIDIXXXXXXXXXXXXXXXXXXXXXWIGSN 105
           VLFP+AVTFFITWW IQFVDGFFSPIY RLGID+                     W+G+ 
Sbjct: 60  VLFPVAVTFFITWWFIQFVDGFFSPIYSRLGIDVFGLGFITSLAFVFLIGVFVSSWMGAT 119

Query: 106 VFWLGEWFIKRMPFVRHLYSASKQISAAISPAQNTTAFKEVAIIRHPRIGEYAFGFITST 165
           VFW+GEWFIKRMP VRH+YSASKQISAAISP QNTTAFKEVAIIRHPR+GEYAFGFITST
Sbjct: 120 VFWIGEWFIKRMPLVRHIYSASKQISAAISPDQNTTAFKEVAIIRHPRVGEYAFGFITST 179

Query: 166 VILQRDNEDEELCSVFVPTNHLYIGDIFLVNSKDIIRPNLSIREGI 211
           VILQ+DNEDEELCSVFVPTNHLYIGDIFLVNSKDIIRPNLSIREGI
Sbjct: 180 VILQKDNEDEELCSVFVPTNHLYIGDIFLVNSKDIIRPNLSIREGI 225


>Glyma06g15360.1 
          Length = 258

 Score =  307 bits (786), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 157/226 (69%), Positives = 168/226 (74%), Gaps = 16/226 (7%)

Query: 1   MPEEKEESTSIPLSHAENGG-EEPEDPAKXXXXXXXXXTRE--------------MTGCV 45
           M EEKE STSIPLS  +N   ++PEDPAK         TR               MTGCV
Sbjct: 1   MAEEKE-STSIPLSQGDNASRDDPEDPAKSPLSSPNSSTRRACCFVLQSWVSKKFMTGCV 59

Query: 46  VLFPIAVTFFITWWLIQFVDGFFSPIYERLGIDIXXXXXXXXXXXXXXXXXXXXXWIGSN 105
           VLFP+AVTFFITWW IQFVDGFFSPIY RLGID+                     W+G+ 
Sbjct: 60  VLFPVAVTFFITWWFIQFVDGFFSPIYSRLGIDVFGLGFVTSLAFVFLIGVFVSSWMGAT 119

Query: 106 VFWLGEWFIKRMPFVRHLYSASKQISAAISPAQNTTAFKEVAIIRHPRIGEYAFGFITST 165
           VFW+GEWFIKRMP VRH+YSASKQISAAISP QNTTAFKEVAIIRHPR+GEYAFGFITST
Sbjct: 120 VFWIGEWFIKRMPLVRHIYSASKQISAAISPDQNTTAFKEVAIIRHPRVGEYAFGFITST 179

Query: 166 VILQRDNEDEELCSVFVPTNHLYIGDIFLVNSKDIIRPNLSIREGI 211
           V LQ+DNEDEELCSVFVPTNHLYIGDIFLVNSKDIIRPNLSIREGI
Sbjct: 180 VTLQKDNEDEELCSVFVPTNHLYIGDIFLVNSKDIIRPNLSIREGI 225


>Glyma06g15360.2 
          Length = 204

 Score =  284 bits (727), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 136/171 (79%), Positives = 144/171 (84%)

Query: 41  MTGCVVLFPIAVTFFITWWLIQFVDGFFSPIYERLGIDIXXXXXXXXXXXXXXXXXXXXX 100
           MTGCVVLFP+AVTFFITWW IQFVDGFFSPIY RLGID+                     
Sbjct: 1   MTGCVVLFPVAVTFFITWWFIQFVDGFFSPIYSRLGIDVFGLGFVTSLAFVFLIGVFVSS 60

Query: 101 WIGSNVFWLGEWFIKRMPFVRHLYSASKQISAAISPAQNTTAFKEVAIIRHPRIGEYAFG 160
           W+G+ VFW+GEWFIKRMP VRH+YSASKQISAAISP QNTTAFKEVAIIRHPR+GEYAFG
Sbjct: 61  WMGATVFWIGEWFIKRMPLVRHIYSASKQISAAISPDQNTTAFKEVAIIRHPRVGEYAFG 120

Query: 161 FITSTVILQRDNEDEELCSVFVPTNHLYIGDIFLVNSKDIIRPNLSIREGI 211
           FITSTV LQ+DNEDEELCSVFVPTNHLYIGDIFLVNSKDIIRPNLSIREGI
Sbjct: 121 FITSTVTLQKDNEDEELCSVFVPTNHLYIGDIFLVNSKDIIRPNLSIREGI 171


>Glyma09g32480.1 
          Length = 265

 Score =  258 bits (658), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 123/171 (71%), Positives = 137/171 (80%)

Query: 41  MTGCVVLFPIAVTFFITWWLIQFVDGFFSPIYERLGIDIXXXXXXXXXXXXXXXXXXXXX 100
           MTGCV+LFPIA+TF+ITWW I FVDGFFSPIY +LGIDI                     
Sbjct: 63  MTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFITSITFIFLVGVFMSS 122

Query: 101 WIGSNVFWLGEWFIKRMPFVRHLYSASKQISAAISPAQNTTAFKEVAIIRHPRIGEYAFG 160
           W+G++V  LGEWFIKRMP VRH+Y+ASKQISAAISP QNT AFKEVAIIRHPRIGEYAFG
Sbjct: 123 WLGASVLGLGEWFIKRMPLVRHIYNASKQISAAISPDQNTQAFKEVAIIRHPRIGEYAFG 182

Query: 161 FITSTVILQRDNEDEELCSVFVPTNHLYIGDIFLVNSKDIIRPNLSIREGI 211
           FITS+V LQ  + DEELC V+VPTNHLYIGDIFLVN+KD+IRPNLSIREGI
Sbjct: 183 FITSSVTLQNYSGDEELCCVYVPTNHLYIGDIFLVNTKDVIRPNLSIREGI 233


>Glyma07g09300.1 
          Length = 265

 Score =  257 bits (657), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 123/171 (71%), Positives = 137/171 (80%)

Query: 41  MTGCVVLFPIAVTFFITWWLIQFVDGFFSPIYERLGIDIXXXXXXXXXXXXXXXXXXXXX 100
           MTGCV+LFPIA+TF+ITWW I FVDGFFSPIY +LGIDI                     
Sbjct: 63  MTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFITSITFIFLVGVFMSS 122

Query: 101 WIGSNVFWLGEWFIKRMPFVRHLYSASKQISAAISPAQNTTAFKEVAIIRHPRIGEYAFG 160
           W+G++V  LGEWFIKRMP VRH+Y+ASKQISAAISP QNT AFKEVAIIRHPRIGEYAFG
Sbjct: 123 WLGASVLGLGEWFIKRMPLVRHIYNASKQISAAISPDQNTQAFKEVAIIRHPRIGEYAFG 182

Query: 161 FITSTVILQRDNEDEELCSVFVPTNHLYIGDIFLVNSKDIIRPNLSIREGI 211
           FITS+V LQ  + DEELC V+VPTNHLYIGDIFLVN+KD+IRPNLSIREGI
Sbjct: 183 FITSSVTLQNYSGDEELCCVYVPTNHLYIGDIFLVNTKDVIRPNLSIREGI 233


>Glyma14g08210.1 
          Length = 259

 Score =  216 bits (551), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 99/171 (57%), Positives = 130/171 (76%), Gaps = 1/171 (0%)

Query: 41  MTGCVVLFPIAVTFFITWWLIQFVDGFFSPIYERLGIDIXXXXXXXXXXXXXXXXXXXXX 100
           M+GCV+L PIA+TF++TW  I+FVDGFFSPIY  LGI+I                     
Sbjct: 55  MSGCVILLPIAITFYVTWGFIRFVDGFFSPIYNHLGINIFGLGFITSITFIFLVGIFMSS 114

Query: 101 WIGSNVFWLGEWFIKRMPFVRHLYSASKQISAAISPAQNTTAFKEVAIIRHPRIGEYAFG 160
           W+G++V  LGEWFIK+MP V ++Y+ASKQISAAISP Q++ AFKEVAII+HPR+GEYA G
Sbjct: 115 WLGTSVLTLGEWFIKKMPLVSYIYAASKQISAAISPDQSSKAFKEVAIIKHPRVGEYALG 174

Query: 161 FITSTVILQRDNEDEELCSVFVPTNHLYIGDIFLVNSKDIIRPNLSIREGI 211
           FITS+V+L+  +E E  C V++PTNHLY+GDI+L++ +DI+RPNLS+RE I
Sbjct: 175 FITSSVVLRNRDEKELFC-VYIPTNHLYLGDIYLISPEDILRPNLSVREAI 224


>Glyma20g16930.1 
          Length = 120

 Score =  154 bits (388), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 91/111 (81%), Gaps = 1/111 (0%)

Query: 101 WIGSNVFWLGEWFIKRMPFVRHLYSASKQISAAISPAQNTTAFKEVAIIRHPRIGEYAFG 160
           W+G+ V  LGEWFIK+M  VR+LY AS QISA ISP Q++ AFKEV+IIRHP +GEYA G
Sbjct: 9   WLGTLVLTLGEWFIKKMALVRYLYVASTQISATISPDQSSNAFKEVSIIRHPHVGEYALG 68

Query: 161 FITSTVILQRDNEDEELCSVFVPTNHLYIGDIFLVNSKDIIRPNLSIREGI 211
           FITS+++L+  +E E  C V++PTNHLY+GDI+L++ +DI+RPNLS+RE I
Sbjct: 69  FITSSMVLRNIDEKEIFC-VYIPTNHLYLGDIYLISLEDILRPNLSVREAI 118


>Glyma06g37800.1 
          Length = 115

 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 37/48 (77%)

Query: 101 WIGSNVFWLGEWFIKRMPFVRHLYSASKQISAAISPAQNTTAFKEVAI 148
           W+ +++  L EWF K+MP V +LY  SKQISAAISP Q++ AFKEVAI
Sbjct: 29  WLETSILTLAEWFYKKMPLVSYLYVVSKQISAAISPDQSSNAFKEVAI 76


>Glyma17g19010.1 
          Length = 130

 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 6/71 (8%)

Query: 114 IKRMPFVRHLYSASKQISAAISPAQNTTAFKEVAII-RHPRIGEYAFGFITSTVILQRDN 172
           IK+MP V +LY+AS QISA ISP      F  + I  +HP +GEYA GFIT+ V+L   +
Sbjct: 5   IKKMPHVSYLYAASNQISATISP----DIFVNIFICHQHPCVGEYALGFITTLVVLWNRD 60

Query: 173 EDEELCSVFVP 183
           E +  C V++P
Sbjct: 61  EKDLFC-VYIP 70