Jatropha Genome Database

JcCA0308861.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0308861.10 + phase: 0 /partial
         (207 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g46170.1                                                       271   5e-73
Glyma09g40030.1                                                       258   3e-69
Glyma11g36270.1                                                        89   3e-18
Glyma03g01340.1                                                        66   2e-11
Glyma08g48360.1                                                        64   1e-10
Glyma06g48390.1                                                        62   4e-10
Glyma06g48460.1                                                        62   5e-10
Glyma13g16660.1                                                        62   5e-10
Glyma08g48330.1                                                        60   2e-09
Glyma05g09270.1                                                        53   2e-07
Glyma19g00820.1                                                        52   4e-07

>Glyma18g46170.1 
          Length = 277

 Score =  271 bits (692), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 138/208 (66%), Positives = 169/208 (81%), Gaps = 1/208 (0%)

Query: 1   GISSSRKLLAGSSEETPVHSPLTP-ALTPLSSGTTKEQRAVTKPSTVQAVLKGIKQSPKK 59
           GISSS +LLA SSEETPV SPL P +L   S G  ++Q+ VTKP  VQA+LK IKQSPKK
Sbjct: 70  GISSSAQLLANSSEETPVLSPLAPVSLLSSSKGEDQKQKVVTKPEKVQAILKAIKQSPKK 129

Query: 60  LNLVAALVRGMRVEDALLQLQLTIKRASKTVYQVIHSARANATHNHGLDPDRLLVAEAFV 119
           +NLVAALVRGM V+DAL+QL+LTIKRA+KTVYQVIHSARANA+HNHGLDP+RL+VAEAFV
Sbjct: 130 VNLVAALVRGMLVKDALMQLELTIKRAAKTVYQVIHSARANASHNHGLDPERLIVAEAFV 189

Query: 120 GKGFFKKRTSYHAKGRAGIKVRPECRLXXXXXXXXXXXXAKIARLRVHNFRKLSKRERQL 179
           GKGF+KKR   HAKG++ ++VRPECRL            A+IARLRVHNF++L+KR+++L
Sbjct: 190 GKGFYKKRLWPHAKGKSSLRVRPECRLTVVVREITAEEEAEIARLRVHNFKRLTKRQKRL 249

Query: 180 VPHKLIETTPIWNRKGKAAGREPSAVAA 207
           VPH+LIE+ PIW RK K++G+  SA  A
Sbjct: 250 VPHQLIESNPIWGRKNKSSGQNLSATPA 277


>Glyma09g40030.1 
          Length = 266

 Score =  258 bits (659), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 133/200 (66%), Positives = 160/200 (80%), Gaps = 1/200 (0%)

Query: 1   GISSSRKLLAGSSEETPVHSPLTP-ALTPLSSGTTKEQRAVTKPSTVQAVLKGIKQSPKK 59
           GISSS  LLA SSEETPV SPL P +L   S G  ++Q+ VTK   VQAVLK IKQSPKK
Sbjct: 50  GISSSANLLANSSEETPVLSPLVPVSLLGSSKGEDQKQKVVTKQEKVQAVLKAIKQSPKK 109

Query: 60  LNLVAALVRGMRVEDALLQLQLTIKRASKTVYQVIHSARANATHNHGLDPDRLLVAEAFV 119
           +NLVAALVRGM V+DAL+QL+LTIKRA+KTVYQVIHSARANA+HNHGLDP+RL+VAEAFV
Sbjct: 110 VNLVAALVRGMLVKDALMQLELTIKRAAKTVYQVIHSARANASHNHGLDPERLIVAEAFV 169

Query: 120 GKGFFKKRTSYHAKGRAGIKVRPECRLXXXXXXXXXXXXAKIARLRVHNFRKLSKRERQL 179
           GKGF+KKR   HAKG++ ++VRPECRL            A+IARLRVHNF+K +KR+++L
Sbjct: 170 GKGFYKKRLWPHAKGKSSLRVRPECRLTVVVREITAEEEAEIARLRVHNFKKRTKRQQRL 229

Query: 180 VPHKLIETTPIWNRKGKAAG 199
           VPH+LI + PIW RK K++ 
Sbjct: 230 VPHQLIVSNPIWGRKNKSSA 249


>Glyma11g36270.1 
          Length = 122

 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 65/91 (71%), Gaps = 9/91 (9%)

Query: 15  ETPVHSPLTP-ALTPLSSGTTKEQRAVTKPSTVQAVLKGIKQSPKKLNLVAALVRGMRVE 73
           ETPV SPL P +L   S G  ++Q+ VTK   VQA       SPKK+NLVAALVRGM V+
Sbjct: 19  ETPVLSPLVPVSLLGSSKGEDQKQKVVTKQVKVQA-------SPKKVNLVAALVRGMLVK 71

Query: 74  DALLQLQLTIKRASKTVYQVIHSARANATHN 104
           DAL+QL+LTIKRA+KTVYQV+   + N TH+
Sbjct: 72  DALMQLELTIKRAAKTVYQVL-VKKNNLTHS 101


>Glyma03g01340.1 
          Length = 221

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/41 (78%), Positives = 38/41 (92%)

Query: 56 SPKKLNLVAALVRGMRVEDALLQLQLTIKRASKTVYQVIHS 96
          SPKK+NLVAALVRGM V+DAL+QL+LTIKRA+KTVYQ+  S
Sbjct: 15 SPKKVNLVAALVRGMLVKDALMQLELTIKRAAKTVYQLAKS 55


>Glyma08g48360.1 
          Length = 158

 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 42/63 (66%)

Query: 56  SPKKLNLVAALVRGMRVEDALLQLQLTIKRASKTVYQVIHSARANATHNHGLDPDRLLVA 115
           SPKK+NLVAALVRGM V+DA +QL+ TIKRA+KTVYQV+  A       H  +  +L   
Sbjct: 78  SPKKVNLVAALVRGMLVKDASMQLESTIKRAAKTVYQVVTLALFYLLVAHSCECMQLFFV 137

Query: 116 EAF 118
             F
Sbjct: 138 NEF 140


>Glyma06g48390.1 
          Length = 137

 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/39 (76%), Positives = 36/39 (92%)

Query: 56  SPKKLNLVAALVRGMRVEDALLQLQLTIKRASKTVYQVI 94
           SPKK+NLVAALVRGM V+DA +QL+ TIKRA+KTVYQV+
Sbjct: 77  SPKKVNLVAALVRGMLVKDASMQLESTIKRAAKTVYQVV 115


>Glyma06g48460.1 
          Length = 131

 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/38 (78%), Positives = 35/38 (92%)

Query: 56 SPKKLNLVAALVRGMRVEDALLQLQLTIKRASKTVYQV 93
          SPKK+NLVAALVRGM V+DA +QL+ TIKRA+KTVYQV
Sbjct: 13 SPKKVNLVAALVRGMLVKDASMQLESTIKRAAKTVYQV 50


>Glyma13g16660.1 
          Length = 120

 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/38 (78%), Positives = 35/38 (92%)

Query: 56 SPKKLNLVAALVRGMRVEDALLQLQLTIKRASKTVYQV 93
          SPKK+NLVAALVRGM V+DA +QL+ TIKRA+KTVYQV
Sbjct: 13 SPKKVNLVAALVRGMLVKDASMQLESTIKRAAKTVYQV 50


>Glyma08g48330.1 
          Length = 37

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/37 (78%), Positives = 34/37 (91%)

Query: 56 SPKKLNLVAALVRGMRVEDALLQLQLTIKRASKTVYQ 92
          SPKK+NLVAALVRGM V+DA +QL+ TIKRA+KTVYQ
Sbjct: 1  SPKKVNLVAALVRGMLVKDASMQLESTIKRAAKTVYQ 37


>Glyma05g09270.1 
          Length = 209

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 52/89 (58%)

Query: 48  AVLKGIKQSPKKLNLVAALVRGMRVEDALLQLQLTIKRASKTVYQVIHSARANATHNHGL 107
           AV + I+ S  K   V   +RG + ++ L+ L+L   RA + + +++ SA ANA++N GL
Sbjct: 93  AVGRNIRMSANKARRVIDQIRGRKYDETLMVLELMPYRACEAILKIVFSAGANASNNLGL 152

Query: 108 DPDRLLVAEAFVGKGFFKKRTSYHAKGRA 136
               L++++A V +G   KR    A+GRA
Sbjct: 153 SKGSLVISKAEVNEGKTMKRVKPVARGRA 181


>Glyma19g00820.1 
          Length = 198

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 52/89 (58%)

Query: 48  AVLKGIKQSPKKLNLVAALVRGMRVEDALLQLQLTIKRASKTVYQVIHSARANATHNHGL 107
           AV + I+ S  K   V   +RG + ++ L+ L+L   RA + + +++ SA ANA++N GL
Sbjct: 82  AVGRNIRMSANKARRVIDQIRGSKYDETLMVLELMPYRACEAILKIVFSAGANASNNLGL 141

Query: 108 DPDRLLVAEAFVGKGFFKKRTSYHAKGRA 136
               L++++A V +G   KR    A+GRA
Sbjct: 142 SKGSLVISKAEVNEGKTMKRVKPVARGRA 170