Jatropha Genome Database

JcCA0308281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0308281.10 - phase: 0 /partial
         (57 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g48020.1                                                        84   4e-17

>Glyma06g48020.1 
          Length = 160

 Score = 83.6 bits (205), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 39/56 (69%), Positives = 47/56 (83%)

Query: 1  MDPRYTGEMLKHLEKQNELLTEAYNSMSHELHKLQVEEEMLMRKFYELMAAQGLSK 56
           DPRYTGE+LKH++ QNE+L EAY SM HEL KLQVEEEMLMRK +E+M+A G +K
Sbjct: 6  FDPRYTGELLKHMDSQNEVLMEAYRSMFHELRKLQVEEEMLMRKMHEVMSAHGPTK 61