Jatropha Genome Database

JcCA0307801.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0307801.10 + phase: 0 
         (510 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g34050.1                                                       667   0.0  
Glyma05g35010.1                                                       113   4e-25
Glyma08g04700.1                                                       110   4e-24
Glyma10g31940.1                                                        56   1e-07

>Glyma03g34050.1 
          Length = 501

 Score =  667 bits (1720), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/512 (66%), Positives = 384/512 (75%), Gaps = 13/512 (2%)

Query: 1   MP--PILSSLHAVHPLISRLYAKPLFLSFTNLSHSSLSLREFSLPRQSFPVKVRTLSSIA 58
           MP  P   S   + P  +  Y  P+F S T        L    LP  +    VR  SS++
Sbjct: 1   MPATPFSCSFLTLQPRFNS-YVNPIFRSLT------FQLSSSPLPFNANFSSVRLHSSLS 53

Query: 59  SAAQXXXXXXXXXXXXXXXXXXXXVLEEAVQKIDVNPPKGTRDFPPEEMRLRNWLFHNFR 118
            AA+                     +   VQKIDVNPPKGTRDFPPE+MRLRNWLF++F+
Sbjct: 54  RAAETDSPTGGRSGALTPGP----AVAGEVQKIDVNPPKGTRDFPPEDMRLRNWLFNHFK 109

Query: 119 EVSRLYGFEEVDFPVLESEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARLVI 178
           EVSRLYGFEEVD+PVLESEALF RKAGEEI+DQLYCFEDRGNRRVALRPELTPSLARLVI
Sbjct: 110 EVSRLYGFEEVDYPVLESEALFTRKAGEEIKDQLYCFEDRGNRRVALRPELTPSLARLVI 169

Query: 179 QKGKSVPLPLKWFAVGQCWXXXXXXXXXXXEHYQWNMDIIGVPEVTAEAELISSIVTFFK 238
           QKGKSV LP+KWF VGQCW           EHYQWNMDIIGVP V AEAELI+SIVT FK
Sbjct: 170 QKGKSVSLPIKWFTVGQCWRYERMTRGRRREHYQWNMDIIGVPGVMAEAELIASIVTLFK 229

Query: 239 RIGITASDVGFKVSSRKVLQEVLKCYSISENLFGKVCXXXXXXXXXXXXXXXXXLKSVGM 298
           RIGIT SDVGFKVSSRKVLQEVL CYS+ ENLFGKVC                 LK+VG+
Sbjct: 230 RIGITESDVGFKVSSRKVLQEVLNCYSVPENLFGKVCVIIDKIEKIPADEIKKELKAVGL 289

Query: 299 SEEAVEELLQVLSIKSLTKLEEILGGAGEAVADLKQLFSLAENFGYSEWIQFDASVVRGL 358
           S+EAV+ELLQVLS+KSLT+LEE LG +GEAVADLKQLFSLAE  GYS+W+QFDASVVRGL
Sbjct: 290 SQEAVQELLQVLSVKSLTELEERLGSSGEAVADLKQLFSLAEKIGYSKWLQFDASVVRGL 349

Query: 359 AYYTGIVFEGFDREGKLRAICGGGRYDRLLSTFGGDDLPACGFGFGDAVIVXXXXXXXXX 418
           AYYTGIVFEGFDREGKLRAICGGGRYD L STFG DD+ ACGFGFGDAVIV         
Sbjct: 350 AYYTGIVFEGFDREGKLRAICGGGRYDHLFSTFGADDIAACGFGFGDAVIVELLKEKGLL 409

Query: 419 XXXXXQVENIVCALDPDLQGAASTVATILREKGQTVDLVLENKPLKWVFKRAGRINAQRL 478
                Q+++IVCALD DLQG A+ VA ILREKGQ V+LVLE+KPLKWVFKRA R+NA+RL
Sbjct: 410 PELNLQIDDIVCALDEDLQGCAAMVANILREKGQIVELVLESKPLKWVFKRAARLNAERL 469

Query: 479 ILVGNTEWQKGMVGVKILSSGEQYEVKLDELE 510
           +LVGN+EWQ+G+VGVKILS+ EQYEVKLD+L+
Sbjct: 470 VLVGNSEWQRGVVGVKILSTAEQYEVKLDDLK 501


>Glyma05g35010.1 
          Length = 553

 Score =  113 bits (283), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 181/424 (42%), Gaps = 28/424 (6%)

Query: 96  PKGTRDFPPEEMRLRNWLFHNFREVSRLYGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 155
           PKGTRDF  E+M +R   F    EV   +G   +D PV E     + K GE+ +  +Y  
Sbjct: 118 PKGTRDFAKEQMTIRKKAFLIIEEVFERHGATALDTPVFELRETLMGKYGEDSK-LIYDL 176

Query: 156 EDRGNRRVALRPELTPSLARLVIQKGKSVPLPLKWFAVGQCWXXXXXXXXXXXEHYQWNM 215
            D+G   ++LR +LT   AR V   G +     K + + + +           E YQ + 
Sbjct: 177 ADQGGELLSLRYDLTVPFARFVAMNGLT---SFKRYQIAKVYRRDNPSKGRYREFYQCDF 233

Query: 216 DIIGVPE----VTAEAELISSIVTFFKRIGITASDVGFKVSSRKVLQEVLKCYSISENLF 271
           DI G P     +  + E++  +      + I   ++  K++ RK+L  +++   +    F
Sbjct: 234 DIAGTPTPSEIMGPDFEVVRILTELLDELDIGEYEI--KLNHRKLLDSMMQICGVPPEKF 291

Query: 272 GKVCXXXXXXXXXXXXXXXXXL-KSVGMSEEAVEELLQVLSIKS-----LTKLEE----- 320
             +C                 + +  G++ E  + +   +  K      L+K ++     
Sbjct: 292 RTICSSIDKLDKQSFQQIRKEMVEEKGLTAETADRIETFVKEKGSPLALLSKFKQEGSDF 351

Query: 321 -ILGGAGEAVADLKQLFSLAENFGYSEWIQFDASVVRGLAYYTGIVFEGFDREG-KLRAI 378
               GA EA+ +L+ LF   E     + + FD S+ RGL YYTG++FE   + G ++ +I
Sbjct: 352 SKHKGASEALKELEILFIALEKSKRIDKVVFDLSLARGLDYYTGVIFEAVFKGGTQVGSI 411

Query: 379 CGGGRYDRLLSTFGGDDLPACGFGFGDA---VIVXXXXXXXXXXXXXXQVENIVCALDPD 435
             GGRYD L+  FG   +PA G   G      I+              + E +V  +  D
Sbjct: 412 AAGGRYDNLIGMFGSRSVPAVGVSLGIERVFAIMEQQQKNLNQMARPTKTEVLVSIVGND 471

Query: 436 LQGAASTVATILREKGQTVDLVLENKPLKWVFKRAGRINAQRLILVGNTEWQKGMVGVKI 495
              AA     +   + +   LV + +   + + +  RI    ++LV   E ++G+V +K 
Sbjct: 472 FTLAAELAGELWDARVKAEFLVNKRRAKHFEYAKESRIPW--MVLVYEQEIKEGVVQLKN 529

Query: 496 LSSG 499
           L + 
Sbjct: 530 LEAN 533


>Glyma08g04700.1 
          Length = 754

 Score =  110 bits (275), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 145/326 (44%), Gaps = 23/326 (7%)

Query: 96  PKGTRDFPPEEMRLRNWLFHNFREVSRLYGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 155
           PKGTRDF  E+M +R   F    EV   +G   +D PV E     + K GE+ +  +Y  
Sbjct: 318 PKGTRDFAKEQMTIRKKAFAIIEEVFERHGATALDTPVFELRETLMGKYGEDSK-LIYDL 376

Query: 156 EDRGNRRVALRPELTPSLARLVIQKGKSVPLPLKWFAVGQCWXXXXXXXXXXXEHYQWNM 215
            D+G   ++LR +LT   AR V   G    +  K + + + +           E YQ + 
Sbjct: 377 ADQGGELLSLRYDLTVPFARFVAMNG---LVSFKRYQIAKVYRRDNPSKGRYREFYQCDF 433

Query: 216 DIIGVPEVTA----EAELISSIVTFFKRIGITASDVGFKVSSRKVLQEVLKCYSISENLF 271
           DI G P ++     + E++  +      + I   ++  K++ RK+L  +++   +    F
Sbjct: 434 DIAGTPGLSEIMGPDFEVVRILTELLDELDIGEYEI--KLNHRKLLDGMMQICGVPPEKF 491

Query: 272 GKVCXXXXXXXXXXXXXXXXXL-KSVGMSEEAVEELLQVLSIKS-----LTKLEE----- 320
             +C                 + +  G++ E  + +   +  K      L+K ++     
Sbjct: 492 RTICSSIDKLDKQSFQQIRKEMVEEKGLTAETADRIETFVKEKGSPLALLSKFKQEGSDF 551

Query: 321 -ILGGAGEAVADLKQLFSLAENFGYSEWIQFDASVVRGLAYYTGIVFEGFDREG-KLRAI 378
               GA  A+ +L+ LF   E     + + FD S+ RGL YYTG++FE   + G ++ +I
Sbjct: 552 SKHKGASVALEELEILFIALEKSKRIDKVVFDLSLARGLDYYTGVIFEAVFKGGTQVGSI 611

Query: 379 CGGGRYDRLLSTFGGDDLPACGFGFG 404
             GGRYD L+  FG   +PA G   G
Sbjct: 612 AAGGRYDNLIGMFGSRSVPAVGVSLG 637


>Glyma10g31940.1 
          Length = 280

 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 6/83 (7%)

Query: 328 AVADLKQLFSLAENFGYSEWIQFDASVVRGLAYYTGIVFEGFD------REGKLRAICGG 381
           A+ +L+ LF L +     + + FD S+ RGL YYTGI+FE         R     +I  G
Sbjct: 98  ALNNLEILFKLLDKSKRLDKVVFDLSLARGLDYYTGIIFEALQKIFLLVRILMFGSIASG 157

Query: 382 GRYDRLLSTFGGDDLPACGFGFG 404
           GRYD L+  FG   +   G   G
Sbjct: 158 GRYDNLMEMFGSKKVTTIGVSLG 180