Jatropha Genome Database

JcCA0307051.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0307051.30 - phase: 0 
         (243 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g21710.1                                                       296   1e-80
Glyma18g32680.1                                                       295   2e-80
Glyma16g10700.1                                                       295   3e-80
Glyma08g46070.1                                                       294   7e-80
Glyma08g43690.1                                                       293   1e-79
Glyma18g09430.1                                                       288   3e-78
Glyma03g21710.2                                                       270   1e-72
Glyma17g18290.1                                                        84   2e-16
Glyma19g23170.1                                                        52   6e-07

>Glyma03g21710.1 
          Length = 220

 Score =  296 bits (758), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 148/178 (83%), Positives = 151/178 (84%), Gaps = 1/178 (0%)

Query: 54  KPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNEL 113
           +PANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTR+LDVVYNASNNEL
Sbjct: 32  QPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRVLDVVYNASNNEL 91

Query: 114 VRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXKK 173
           VRTQTLVKSAIVQVDAAPFKQWYLQHYGV+IGR                         KK
Sbjct: 92  VRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGR-KKKTAAKKETAEEGGDAAAAAEEAKK 150

Query: 174 SNHVQRKLEKRQKDRKLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYM 231
           SNHVQRKLEKRQKDRKLD HIEEQFG GRLLACISSRPGQCGRADGYILEGKELEFYM
Sbjct: 151 SNHVQRKLEKRQKDRKLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYM 208


>Glyma18g32680.1 
          Length = 217

 Score =  295 bits (756), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 146/178 (82%), Positives = 150/178 (84%), Gaps = 4/178 (2%)

Query: 54  KPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNEL 113
           + ANTKLSSNKT+RRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNEL
Sbjct: 32  QAANTKLSSNKTIRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNEL 91

Query: 114 VRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXKK 173
           VRTQTLVK+AIVQVDAAPFKQWYLQHYGV+IGR                         KK
Sbjct: 92  VRTQTLVKNAIVQVDAAPFKQWYLQHYGVEIGR----KKKVASKKDSTEEGEAAAEETKK 147

Query: 174 SNHVQRKLEKRQKDRKLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYM 231
           SNHVQRKLEKRQKDRKLD HIEEQFG GRLLACISSRPGQCGRADGYILEGKELEFYM
Sbjct: 148 SNHVQRKLEKRQKDRKLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYM 205


>Glyma16g10700.1 
          Length = 219

 Score =  295 bits (755), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 148/178 (83%), Positives = 151/178 (84%), Gaps = 2/178 (1%)

Query: 54  KPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNEL 113
           +PANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNEL
Sbjct: 32  QPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNEL 91

Query: 114 VRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXKK 173
           VRTQTLVKSAIVQVDAAPFKQWYLQHYGV+IGR                         KK
Sbjct: 92  VRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGR--KKKTAAKKETAEEGAAAVAVEEAKK 149

Query: 174 SNHVQRKLEKRQKDRKLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYM 231
           SNH+QRKLEKRQKDRKLD HIEEQFG GRLLACISSRPGQCGRADGYILEGKELEFYM
Sbjct: 150 SNHLQRKLEKRQKDRKLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYM 207


>Glyma08g46070.1 
          Length = 217

 Score =  294 bits (752), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 145/178 (81%), Positives = 149/178 (83%), Gaps = 4/178 (2%)

Query: 54  KPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNEL 113
           + ANTKLSSNKT+RRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNEL
Sbjct: 32  QAANTKLSSNKTIRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNEL 91

Query: 114 VRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXKK 173
           VRTQTLVKSAIVQVDAAPF+QWYLQHYGV+IGR                         KK
Sbjct: 92  VRTQTLVKSAIVQVDAAPFRQWYLQHYGVEIGR----KKKVAAKKDSTEEGEAAAEETKK 147

Query: 174 SNHVQRKLEKRQKDRKLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYM 231
           SNHVQRKLEKRQKDR LD HIEEQFG GRLLACISSRPGQCGRADGYILEGKELEFYM
Sbjct: 148 SNHVQRKLEKRQKDRNLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYM 205


>Glyma08g43690.1 
          Length = 219

 Score =  293 bits (750), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 144/178 (80%), Positives = 150/178 (84%), Gaps = 2/178 (1%)

Query: 54  KPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNEL 113
           +PANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNEL
Sbjct: 32  QPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNEL 91

Query: 114 VRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXKK 173
           VRTQTLVKSAIVQVDAAPFKQWYLQHYGV++GR                         KK
Sbjct: 92  VRTQTLVKSAIVQVDAAPFKQWYLQHYGVEVGR--KKKSAAASVKKEGEDGEAATEEVKK 149

Query: 174 SNHVQRKLEKRQKDRKLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYM 231
           SNHV RKLEKR+++R LDPHIEEQFG GRLLACISSRPGQCGRADGYILEGKELEFYM
Sbjct: 150 SNHVVRKLEKRKQNRVLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYM 207


>Glyma18g09430.1 
          Length = 219

 Score =  288 bits (737), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 143/178 (80%), Positives = 149/178 (83%), Gaps = 2/178 (1%)

Query: 54  KPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNEL 113
           +PANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEA TRKTRILDVVYNASNNEL
Sbjct: 32  QPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAATRKTRILDVVYNASNNEL 91

Query: 114 VRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXKK 173
           VRTQTLVKSAIVQVDAAPFKQWYLQHYGV++GR                         KK
Sbjct: 92  VRTQTLVKSAIVQVDAAPFKQWYLQHYGVEVGR--KKKSAAASAKKEGEDGEAATEEVKK 149

Query: 174 SNHVQRKLEKRQKDRKLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYM 231
           SNHV RKLEKR+++R LDPHIEEQFG GRLLACISSRPGQCGRADGYILEGKELEFYM
Sbjct: 150 SNHVLRKLEKRKQNRVLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYM 207


>Glyma03g21710.2 
          Length = 196

 Score =  270 bits (689), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 136/166 (81%), Positives = 139/166 (83%), Gaps = 1/166 (0%)

Query: 54  KPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNEL 113
           +PANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTR+LDVVYNASNNEL
Sbjct: 32  QPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRVLDVVYNASNNEL 91

Query: 114 VRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXKK 173
           VRTQTLVKSAIVQVDAAPFKQWYLQHYGV+IGR                         KK
Sbjct: 92  VRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGR-KKKTAAKKETAEEGGDAAAAAEEAKK 150

Query: 174 SNHVQRKLEKRQKDRKLDPHIEEQFGAGRLLACISSRPGQCGRADG 219
           SNHVQRKLEKRQKDRKLD HIEEQFG GRLLACISSRPGQCGRADG
Sbjct: 151 SNHVQRKLEKRQKDRKLDAHIEEQFGGGRLLACISSRPGQCGRADG 196


>Glyma17g18290.1 
          Length = 90

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 39/51 (76%), Positives = 45/51 (88%)

Query: 172 KKSNHVQRKLEKRQKDRKLDPHIEEQFGAGRLLACISSRPGQCGRADGYIL 222
           KKSNHV RKLEK+++++ LDPHIEE+FG GRLLACISSRPGQCG AD  IL
Sbjct: 23  KKSNHVLRKLEKQKQNQVLDPHIEEKFGGGRLLACISSRPGQCGCADRDIL 73


>Glyma19g23170.1 
          Length = 47

 Score = 52.0 bits (123), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/26 (88%), Positives = 23/26 (88%)

Query: 195 EEQFGAGRLLACISSRPGQCGRADGY 220
           EEQFG GRLLACISSRPGQCG AD Y
Sbjct: 22  EEQFGGGRLLACISSRPGQCGCADRY 47