Jatropha Genome Database

JcCA0306971.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0306971.20 + phase: 0 /partial
         (217 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g02380.2                                                       271   3e-73
Glyma11g10040.1                                                       269   2e-72
Glyma12g02380.1                                                       268   4e-72
Glyma01g43720.1                                                       259   1e-69
Glyma01g43720.2                                                       197   8e-51
Glyma11g01760.1                                                       112   3e-25

>Glyma12g02380.2 
          Length = 350

 Score =  271 bits (694), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 137/177 (77%), Positives = 152/177 (85%), Gaps = 3/177 (1%)

Query: 44  VFPNC-IKKRSFSVP--RASVAVEQQTQESKLALIRIGTRGSPLALAQAYETRDKLMATH 100
           VFP+  I+  +FS    RAS+AVEQQT ++K+AL+RIGTRGSPLALAQAYETRDKLMA+H
Sbjct: 9   VFPSFRIRTSAFSKCGIRASIAVEQQTSQTKVALLRIGTRGSPLALAQAYETRDKLMASH 68

Query: 101 SELAEEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGEIDIAVHSMKDVPT 160
           +ELAEEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALING+IDIAVHSMKDVPT
Sbjct: 69  AELAEEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGDIDIAVHSMKDVPT 128

Query: 161 YLPEKTILPCNLEREDVRDAFIXXXXXXXXXXXXXXVIGTASLRRKSQILHRYASLS 217
           YLP+KTILPCNL REDVRDAFI              ++GTASLRRKSQILHRY SL+
Sbjct: 129 YLPDKTILPCNLPREDVRDAFISLSAASLADLPSGSIVGTASLRRKSQILHRYPSLN 185


>Glyma11g10040.1 
          Length = 350

 Score =  269 bits (687), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 137/177 (77%), Positives = 150/177 (84%), Gaps = 3/177 (1%)

Query: 44  VFPNC-IKKRSFSVP--RASVAVEQQTQESKLALIRIGTRGSPLALAQAYETRDKLMATH 100
           VFP+  I   +FS    RAS+AVEQQT ++K+AL++IGTRGSPLALAQAYETRDKLMA+H
Sbjct: 9   VFPSFRITTSAFSKCGIRASIAVEQQTSQTKVALLKIGTRGSPLALAQAYETRDKLMASH 68

Query: 101 SELAEEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGEIDIAVHSMKDVPT 160
            ELAEEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALING+IDIAVHSMKDVPT
Sbjct: 69  PELAEEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGDIDIAVHSMKDVPT 128

Query: 161 YLPEKTILPCNLEREDVRDAFIXXXXXXXXXXXXXXVIGTASLRRKSQILHRYASLS 217
           YLP+KTILPCNL REDVRDAFI              V+GTASLRRKSQILHRY SL+
Sbjct: 129 YLPDKTILPCNLPREDVRDAFISLSAASLADLPSGSVVGTASLRRKSQILHRYPSLN 185


>Glyma12g02380.1 
          Length = 928

 Score =  268 bits (684), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 137/178 (76%), Positives = 152/178 (85%), Gaps = 4/178 (2%)

Query: 44  VFPNC-IKKRSFSVP--RASVAVEQQTQESKLALIRIGTRGS-PLALAQAYETRDKLMAT 99
           VFP+  I+  +FS    RAS+AVEQQT ++K+AL+RIGTRGS PLALAQAYETRDKLMA+
Sbjct: 9   VFPSFRIRTSAFSKCGIRASIAVEQQTSQTKVALLRIGTRGSSPLALAQAYETRDKLMAS 68

Query: 100 HSELAEEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGEIDIAVHSMKDVP 159
           H+ELAEEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALING+IDIAVHSMKDVP
Sbjct: 69  HAELAEEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGDIDIAVHSMKDVP 128

Query: 160 TYLPEKTILPCNLEREDVRDAFIXXXXXXXXXXXXXXVIGTASLRRKSQILHRYASLS 217
           TYLP+KTILPCNL REDVRDAFI              ++GTASLRRKSQILHRY SL+
Sbjct: 129 TYLPDKTILPCNLPREDVRDAFISLSAASLADLPSGSIVGTASLRRKSQILHRYPSLN 186


>Glyma01g43720.1 
          Length = 356

 Score =  259 bits (663), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 131/162 (80%), Positives = 140/162 (86%), Gaps = 3/162 (1%)

Query: 56  VPRASVAVEQQTQESKLALIRIGTRGSPLALAQAYETRDKLMATHSELAEEGAIQIVIIK 115
           V +ASVAVEQQT   K+ALIRIGTRGSPLALAQAYETRDKLMA+H +LAEEGAI+IVIIK
Sbjct: 33  VTKASVAVEQQT---KVALIRIGTRGSPLALAQAYETRDKLMASHPDLAEEGAIEIVIIK 89

Query: 116 TTGDKILSQPLADIGGKGLFTKEIDEALINGEIDIAVHSMKDVPTYLPEKTILPCNLERE 175
           TTGDKIL+QPLADIGGKGLFTKEIDEAL+N EIDIAVHSMKDVPTYLP+KTILPCNL RE
Sbjct: 90  TTGDKILTQPLADIGGKGLFTKEIDEALLNSEIDIAVHSMKDVPTYLPDKTILPCNLPRE 149

Query: 176 DVRDAFIXXXXXXXXXXXXXXVIGTASLRRKSQILHRYASLS 217
           DVRDAFI              VIGTASLRRKSQILHRY SL+
Sbjct: 150 DVRDAFISLTAASLADLPPASVIGTASLRRKSQILHRYPSLN 191


>Glyma01g43720.2 
          Length = 286

 Score =  197 bits (500), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 96/121 (79%), Positives = 103/121 (85%)

Query: 97  MATHSELAEEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGEIDIAVHSMK 156
           MA+H +LAEEGAI+IVIIKTTGDKIL+QPLADIGGKGLFTKEIDEAL+N EIDIAVHSMK
Sbjct: 1   MASHPDLAEEGAIEIVIIKTTGDKILTQPLADIGGKGLFTKEIDEALLNSEIDIAVHSMK 60

Query: 157 DVPTYLPEKTILPCNLEREDVRDAFIXXXXXXXXXXXXXXVIGTASLRRKSQILHRYASL 216
           DVPTYLP+KTILPCNL REDVRDAFI              VIGTASLRRKSQILHRY SL
Sbjct: 61  DVPTYLPDKTILPCNLPREDVRDAFISLTAASLADLPPASVIGTASLRRKSQILHRYPSL 120

Query: 217 S 217
           +
Sbjct: 121 N 121


>Glyma11g01760.1 
          Length = 289

 Score =  112 bits (280), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/76 (76%), Positives = 68/76 (89%), Gaps = 3/76 (3%)

Query: 50  KKRSFSVPRASVAVEQQTQESKLALIRIGTRGSPLALAQAYETRDKLMATHSELAEEGAI 109
           K ++ S+ +ASVAVEQQT   K+ALIRIGTRGSPLALAQA+ETRDKL A+H +LAEEGAI
Sbjct: 11  KTKTASLSKASVAVEQQT---KVALIRIGTRGSPLALAQAHETRDKLRASHPDLAEEGAI 67

Query: 110 QIVIIKTTGDKILSQP 125
           +IVIIKTTGDKIL+QP
Sbjct: 68  EIVIIKTTGDKILTQP 83