Jatropha Genome Database

JcCA0306971.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0306971.10 - phase: 0 
         (102 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g43290.1                                                       176   5e-45
Glyma08g46500.2                                                       176   7e-45
Glyma18g35450.1                                                       175   7e-45
Glyma08g46500.1                                                       166   7e-42
Glyma08g43290.2                                                       140   4e-34
Glyma08g11770.3                                                        73   7e-14
Glyma08g11770.2                                                        73   7e-14
Glyma08g11770.1                                                        73   7e-14

>Glyma08g43290.1 
          Length = 99

 Score =  176 bits (446), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 86/96 (89%), Positives = 88/96 (91%), Gaps = 1/96 (1%)

Query: 3  SGVIGQTPEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVEFNS 62
          SGV     EEDKKP +Q AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV+FNS
Sbjct: 2  SGVTNNN-EEDKKPTEQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNS 60

Query: 63 IAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 98
          IAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 61 IAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 96


>Glyma08g46500.2 
          Length = 103

 Score =  176 bits (445), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 83/90 (92%), Positives = 87/90 (96%)

Query: 9  TPEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVEFNSIAFLFD 68
          + EE+KKP+DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV+FNSIAFLFD
Sbjct: 9  SQEEEKKPSDQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFD 68

Query: 69 GRRLRGEQTPDELEMEDGDEIDAMLHQTGG 98
          GRRLR EQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 69 GRRLRAEQTPDELEMEDGDEIDAMLHQTGG 98


>Glyma18g35450.1 
          Length = 114

 Score =  175 bits (444), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 83/90 (92%), Positives = 87/90 (96%)

Query: 9  TPEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVEFNSIAFLFD 68
          + EE+KKP+DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV+FNSIAFLFD
Sbjct: 9  SQEEEKKPSDQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFD 68

Query: 69 GRRLRGEQTPDELEMEDGDEIDAMLHQTGG 98
          GRRLR EQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 69 GRRLRAEQTPDELEMEDGDEIDAMLHQTGG 98


>Glyma08g46500.1 
          Length = 117

 Score =  166 bits (419), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 83/102 (81%), Positives = 86/102 (84%), Gaps = 14/102 (13%)

Query: 11  EEDKKPNDQSAHINLKVKGQ--------------DGNEVFFRIKRSTQLKKLMNAYCDRQ 56
           EE+KKP+DQ AHINLKVKGQ              DGNEVFFRIKRSTQLKKLMNAYCDRQ
Sbjct: 11  EEEKKPSDQGAHINLKVKGQVSILYSPFPLLNFMDGNEVFFRIKRSTQLKKLMNAYCDRQ 70

Query: 57  SVEFNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 98
           SV+FNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 71  SVDFNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 112


>Glyma08g43290.2 
          Length = 86

 Score =  140 bits (352), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 68/79 (86%), Positives = 71/79 (89%), Gaps = 1/79 (1%)

Query: 3  SGVIGQTPEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVEFNS 62
          SGV     EEDKKP +Q AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV+FNS
Sbjct: 2  SGVTNNN-EEDKKPTEQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNS 60

Query: 63 IAFLFDGRRLRGEQTPDEL 81
          IAFLFDGRRLR EQTPDE+
Sbjct: 61 IAFLFDGRRLRAEQTPDEV 79


>Glyma08g11770.3 
          Length = 106

 Score = 72.8 bits (177), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 4/93 (4%)

Query: 10  PEEDKKPNDQSA----HINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVEFNSIAF 65
           P + K P+D  A     IN  +  QDG  ++F++  + +L K+   +C+R+++E+ ++ F
Sbjct: 8   PPKRKSPDDNEATDNIQINFSIIDQDGRHMYFKVNHNLELIKVFKDFCERKNLEYETMQF 67

Query: 66  LFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 98
           L DG  ++G+ TP  L MED  EI A  HQ GG
Sbjct: 68  LCDGIHIKGKHTPKMLNMEDDAEIFAATHQVGG 100


>Glyma08g11770.2 
          Length = 106

 Score = 72.8 bits (177), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 4/93 (4%)

Query: 10  PEEDKKPNDQSA----HINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVEFNSIAF 65
           P + K P+D  A     IN  +  QDG  ++F++  + +L K+   +C+R+++E+ ++ F
Sbjct: 8   PPKRKSPDDNEATDNIQINFSIIDQDGRHMYFKVNHNLELIKVFKDFCERKNLEYETMQF 67

Query: 66  LFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 98
           L DG  ++G+ TP  L MED  EI A  HQ GG
Sbjct: 68  LCDGIHIKGKHTPKMLNMEDDAEIFAATHQVGG 100


>Glyma08g11770.1 
          Length = 106

 Score = 72.8 bits (177), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 4/93 (4%)

Query: 10  PEEDKKPNDQSA----HINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVEFNSIAF 65
           P + K P+D  A     IN  +  QDG  ++F++  + +L K+   +C+R+++E+ ++ F
Sbjct: 8   PPKRKSPDDNEATDNIQINFSIIDQDGRHMYFKVNHNLELIKVFKDFCERKNLEYETMQF 67

Query: 66  LFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 98
           L DG  ++G+ TP  L MED  EI A  HQ GG
Sbjct: 68  LCDGIHIKGKHTPKMLNMEDDAEIFAATHQVGG 100