Jatropha Genome Database

JcCA0306831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0306831.10 - phase: 0 /pseudo/partial
         (151 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g13340.2                                                       114   4e-26
Glyma08g13340.1                                                       114   4e-26
Glyma05g30180.1                                                       113   7e-26
Glyma20g35260.1                                                        69   1e-12
Glyma10g32350.1                                                        67   5e-12
Glyma13g44820.1                                                        62   3e-10
Glyma15g00510.1                                                        61   4e-10
Glyma19g34430.1                                                        61   4e-10
Glyma03g31600.1                                                        60   1e-09
Glyma02g13080.1                                                        50   7e-07

>Glyma08g13340.2 
          Length = 274

 Score =  114 bits (285), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 91/185 (49%), Gaps = 34/185 (18%)

Query: 1   VRDVIEHMLDDDEDMANLYLTRKLIQVQELEAMFGGA*HSNRTTTINAQAPHLHRLGSK- 59
           VRD IEH+LDD+EDMA LYLTRK +Q Q+ E    GA  SN     +     L  + S+ 
Sbjct: 88  VRDEIEHLLDDNEDMAQLYLTRKWLQNQQFEEAHLGATTSNNFPNTSRSVRQLGSIRSES 147

Query: 60  ---------------------------------MSVREYINVAEDNVNVQLDDERNELIQ 86
                                            +SVREYI+  ED VN+QLD+ RNELIQ
Sbjct: 148 LVTSHYEDDNNVEDLEMLLDAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQ 207

Query: 87  LQLMLKSSVVSISLQLAICGALSMNFSCVWYEMHGIFGHTVSGIVIVGFSFFMFILRYAK 146
           LQL L  +  +I+++  I GA  MN  C  Y + G+F   V          F+ IL YA+
Sbjct: 208 LQLTLTIASFAIAIETLIAGAFGMNIPCNLYNIDGVFWPFVWTTSAACVLLFLLILAYAR 267

Query: 147 WKNLV 151
           WK L+
Sbjct: 268 WKKLL 272


>Glyma08g13340.1 
          Length = 450

 Score =  114 bits (285), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 91/185 (49%), Gaps = 34/185 (18%)

Query: 1   VRDVIEHMLDDDEDMANLYLTRKLIQVQELEAMFGGA*HSNRTTTINAQAPHLHRLGSK- 59
           VRD IEH+LDD+EDMA LYLTRK +Q Q+ E    GA  SN     +     L  + S+ 
Sbjct: 264 VRDEIEHLLDDNEDMAQLYLTRKWLQNQQFEEAHLGATTSNNFPNTSRSVRQLGSIRSES 323

Query: 60  ---------------------------------MSVREYINVAEDNVNVQLDDERNELIQ 86
                                            +SVREYI+  ED VN+QLD+ RNELIQ
Sbjct: 324 LVTSHYEDDNNVEDLEMLLDAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQ 383

Query: 87  LQLMLKSSVVSISLQLAICGALSMNFSCVWYEMHGIFGHTVSGIVIVGFSFFMFILRYAK 146
           LQL L  +  +I+++  I GA  MN  C  Y + G+F   V          F+ IL YA+
Sbjct: 384 LQLTLTIASFAIAIETLIAGAFGMNIPCNLYNIDGVFWPFVWTTSAACVLLFLLILAYAR 443

Query: 147 WKNLV 151
           WK L+
Sbjct: 444 WKKLL 448


>Glyma05g30180.1 
          Length = 451

 Score =  113 bits (283), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 92/188 (48%), Gaps = 40/188 (21%)

Query: 1   VRDVIEHMLDDDEDMANLYLTRKLIQVQELEAMFGGA*HSNRTTTINAQAPHLHRLGSK- 59
           VRD IEH+LDD+EDMA LYLTRK +Q Q+ E    GA  SN     +     + RLGS  
Sbjct: 265 VRDEIEHLLDDNEDMAQLYLTRKWLQNQQFEEAHLGATTSNNFPNTSRS---VRRLGSNR 321

Query: 60  ------------------------------------MSVREYINVAEDNVNVQLDDERNE 83
                                               +SVREYI+  ED VN+QLD+ RNE
Sbjct: 322 SESLVTCHYEDDNNVEDLEMLLDAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNE 381

Query: 84  LIQLQLMLKSSVVSISLQLAICGALSMNFSCVWYEMHGIFGHTVSGIVIVGFSFFMFILR 143
           LIQLQL L  +  +I+++  I GA  MN  C  Y + G+F   V          F+ IL 
Sbjct: 382 LIQLQLTLTIASFAIAIETMIAGAFGMNIPCNLYHIDGVFWPFVWITSAACVLLFLLILA 441

Query: 144 YAKWKNLV 151
           YA+WK L+
Sbjct: 442 YARWKKLL 449


>Glyma20g35260.1 
          Length = 395

 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 7/102 (6%)

Query: 54  HRLGSKMSVREYINVAEDNVNVQLDDERNELIQLQLMLKSSVVSISLQLAICGALSMNFS 113
           H L    ++REYI+  ED +N+QLD+ RN+LIQL+L L S  V +S    +     MN  
Sbjct: 295 HTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSFYSLVAAIFGMNIP 354

Query: 114 CVWYEMHGIFGHTVSGIVIVGFSF----FMFILRYAKWKNLV 151
             W E H   G+    +VIV   F    F+ I  YA+ K LV
Sbjct: 355 YTWNENH---GYMFKWVVIVSGVFSAVMFLMITAYARKKGLV 393


>Glyma10g32350.1 
          Length = 390

 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 7/102 (6%)

Query: 54  HRLGSKMSVREYINVAEDNVNVQLDDERNELIQLQLMLKSSVVSISLQLAICGALSMNFS 113
           H L    ++REYI+  ED +N+QLD+ RN+LIQL+L L S  V +S    +     MN  
Sbjct: 290 HTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSFYSLVAAIFGMNIP 349

Query: 114 CVWYEMHGIFGHTVSGIVIVGFSF----FMFILRYAKWKNLV 151
             W + H   G+    +VIV   F    F+ I  YA+ K L+
Sbjct: 350 YTWNDNH---GYMFKWVVIVSGVFSAVMFLIITAYARKKGLI 388


>Glyma13g44820.1 
          Length = 443

 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 57/201 (28%)

Query: 1   VRDVIEHMLDDDEDMANLYLTRK----------------------------------LIQ 26
           VRD IE ++DDD DMA +YLT K                                   + 
Sbjct: 241 VRDEIEQLMDDDGDMAEMYLTEKKRRMELSFYGDQSMVGYKSVDGASISAPVSPVSSPLD 300

Query: 27  VQELEAMFGGA*------HSNRTTTINAQAPHL----------HRLGSKMSVREYINVAE 70
            ++LE  F  A        S+ +TT + +   +            L    S++EYI+  E
Sbjct: 301 SRKLEKCFSIARSRHESMRSSESTTESIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTE 360

Query: 71  DNVNVQLDDERNELIQLQLMLKSSVVSISLQLAICGALSMNFSCVWYEMHGIFG-----H 125
           D +N+QLD+ RN+LIQ +L+L ++   +++   + G   MNF    +++   F       
Sbjct: 361 DFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIELFDVPSAFQWVLIIT 420

Query: 126 TVSGIVIVGFSFFMFILRYAK 146
            V G+ I  FS F++  +Y +
Sbjct: 421 GVCGVFI--FSAFVWFFKYRR 439


>Glyma15g00510.1 
          Length = 443

 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 53/199 (26%)

Query: 1   VRDVIEHMLDDDEDMANLYLTRKLIQVQ-------------------------------- 28
           VRD IE ++DDD DMA +YLT K  +++                                
Sbjct: 241 VRDEIEQLMDDDGDMAEMYLTEKKRRMELSFYGDQSMVGYKSVDGASISAPVSPVSSPPD 300

Query: 29  --ELEAMFGGA*------HSNRTTTINAQAPHL----------HRLGSKMSVREYINVAE 70
             +LE  F  A        S+ +TT + +   +            L    S++EYI+  E
Sbjct: 301 SRKLEKSFSIARSRHESMRSSESTTESIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTE 360

Query: 71  DNVNVQLDDERNELIQLQLMLKSSVVSISLQLAICGALSMNFSCVWYEMHGIFGHT--VS 128
           D +N+QLD+ RN+LIQ +L+L ++   +++   + G   MNF    +++   F     ++
Sbjct: 361 DFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIQLFDVPSAFQWVLIIT 420

Query: 129 GIV-IVGFSFFMFILRYAK 146
           GI  +  FS F++  +Y +
Sbjct: 421 GICGVFIFSAFVWFFKYRR 439


>Glyma19g34430.1 
          Length = 388

 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 6/95 (6%)

Query: 61  SVREYINVAEDNVNVQLDDERNELIQLQLMLKSSVVSISLQLAICGALSMNFSCVWYEMH 120
           ++REYI+  ED +N+QLD+ RN+LIQL+L + +  V +SL   +     MN    W +  
Sbjct: 294 TLREYIDDTEDYINIQLDNHRNQLIQLELFISAGTVCMSLYSLVAAIFGMNIPYTW-KAP 352

Query: 121 GIFGHTVSGIVIVG----FSFFMFILRYAKWKNLV 151
           G   H    +VI G     S F+ I+ YA+ K LV
Sbjct: 353 G-HEHVFKWVVIFGGMVCASLFLSIVSYARRKGLV 386


>Glyma03g31600.1 
          Length = 388

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 6/95 (6%)

Query: 61  SVREYINVAEDNVNVQLDDERNELIQLQLMLKSSVVSISLQLAICGALSMNFSCVWYEMH 120
           ++REYI+  ED +N+QLD+ RN+LIQL+L +    V +SL   +     MN    W +  
Sbjct: 294 TLREYIDDTEDYINIQLDNHRNQLIQLELFISVGTVCMSLYSLVAAIFGMNIPYTW-KAP 352

Query: 121 GIFGHTVSGIVIVG----FSFFMFILRYAKWKNLV 151
           G   H    +VI G     S F+ I+ YA+ K LV
Sbjct: 353 G-HEHVFKWVVIFGGMVCASLFLSIVSYARRKGLV 386


>Glyma02g13080.1 
          Length = 414

 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 56/201 (27%)

Query: 1   VRDVIEHMLDDDEDMANLYLT---------------------------------RKLIQV 27
           VRD IEH++DDD DMA + LT                                 R +  V
Sbjct: 211 VRDEIEHLMDDDGDMAEMCLTEKKRRSDTCTFNDCFQTRASGRLISKSAPASPERTISGV 270

Query: 28  QELEAMFGGA*HSNRTTTINAQAPHLHR------------------LGSKMSVREYINVA 69
           Q L+  F    +S++  +    + +  R                  L + +S++EYI+  
Sbjct: 271 QMLQRAFSSIGNSSKHGSSMGSSDNGERIEPLEMLLEAYFIVIDNTLNTILSLKEYIDDT 330

Query: 70  EDNVNVQLDDERNELIQLQLMLKSSVVSISLQLAICGALSMNFSCVWYEMHGIFGH---T 126
           ED +N++L + +N+LIQ +L+L ++ +  ++  A+ G   MNF    ++    F H    
Sbjct: 331 EDFINIKLGNIQNQLIQFELLLTAATLVAAVFAAVAGVFGMNFETTVFDYPSGF-HWVLV 389

Query: 127 VSGIVIVGFSF-FMFILRYAK 146
           ++GI  +   F  +F  RY K
Sbjct: 390 ITGIACIALYFALLFYFRYKK 410