Jatropha Genome Database

JcCA0306451.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0306451.20 - phase: 0 
         (115 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g04220.1                                                       151   2e-37
Glyma15g15250.1                                                       146   5e-36
Glyma07g37010.1                                                       122   6e-29
Glyma17g33220.1                                                        71   2e-13

>Glyma09g04220.1 
          Length = 114

 Score =  151 bits (381), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 69/80 (86%), Positives = 72/80 (90%)

Query: 36  QEAADNNCVYRNEVHHSVAERTQVLQDVAADPTLPRTKAVSCQVCKHQEAVFFQATARGE 95
           QE ADN CVYRNE+HHSV ERTQVLQDVAADPTLPRTK+V C  C H EAVFFQATARGE
Sbjct: 35  QEVADNFCVYRNEIHHSVGERTQVLQDVAADPTLPRTKSVRCSQCNHGEAVFFQATARGE 94

Query: 96  EGMTLFFVCCNPNCGHRWRE 115
           EGMTLFFVCCNPNCGHRWR+
Sbjct: 95  EGMTLFFVCCNPNCGHRWRD 114


>Glyma15g15250.1 
          Length = 114

 Score =  146 bits (368), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 67/80 (83%), Positives = 70/80 (87%)

Query: 36  QEAADNNCVYRNEVHHSVAERTQVLQDVAADPTLPRTKAVSCQVCKHQEAVFFQATARGE 95
           QE ADN CVYRNE+ H V ERTQVLQDVAADPTLPRTK+V C  C H EAVFFQATARGE
Sbjct: 35  QEVADNFCVYRNEIQHPVGERTQVLQDVAADPTLPRTKSVRCTQCNHGEAVFFQATARGE 94

Query: 96  EGMTLFFVCCNPNCGHRWRE 115
           EGMTLFFVCCNPNCGHRWR+
Sbjct: 95  EGMTLFFVCCNPNCGHRWRD 114


>Glyma07g37010.1 
          Length = 114

 Score =  122 bits (307), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 53/80 (66%), Positives = 65/80 (81%)

Query: 36  QEAADNNCVYRNEVHHSVAERTQVLQDVAADPTLPRTKAVSCQVCKHQEAVFFQATARGE 95
           +E AD+N VYRN++HHSV  RT+ L++VAADPTLPRTK+V C  C H EAVFF+A  +GE
Sbjct: 35  EEIADSNVVYRNKIHHSVQRRTRELENVAADPTLPRTKSVRCSQCNHGEAVFFKAPVKGE 94

Query: 96  EGMTLFFVCCNPNCGHRWRE 115
           EGM L FVCCNP CG+RWR+
Sbjct: 95  EGMALIFVCCNPTCGYRWRD 114


>Glyma17g33220.1 
          Length = 48

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 30/51 (58%), Positives = 38/51 (74%), Gaps = 3/51 (5%)

Query: 65  ADPTLPRTKAVSCQVCKHQEAVFFQATARGEEGMTLFFVCCNPNCGHRWRE 115
           A+PTLPR K++ C    H +A+FFQAT + EEGM LFF CCNP+ GH WR+
Sbjct: 1   ANPTLPRIKSIQCN---HGKAIFFQATTKEEEGMILFFACCNPSSGHEWRD 48