Jatropha Genome Database

JcCA0305451.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0305451.10 - phase: 0 /pseudo/partial
         (664 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g04680.1                                                       878   0.0  

>Glyma07g04680.1 
          Length = 861

 Score =  878 bits (2269), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/717 (61%), Positives = 526/717 (73%), Gaps = 65/717 (9%)

Query: 1   VRGSHVGTYLPNSGIWHHTQRLLKKGASNTNTVHHLDFDAPTREHAHQLPDDKKQDESLL 60
           VRGSHVG+YLP+ G+WHHTQR LKKG  + N VHHLDFDAPTRE+A+ LPDDKKQDESLL
Sbjct: 61  VRGSHVGSYLPSCGVWHHTQRYLKKGNLDMNVVHHLDFDAPTRENANLLPDDKKQDESLL 120

Query: 61  EDVWTLLRAGRLEEACDLCRSAGQPWRAATLCPFGGLDLAPSIEALVKNGKNRTLQAIEL 120
           EDVW LLRAGRLEEAC LCRSAGQPWRA++LCPFGGL+  PS+EALVKNGKNRTLQA+E 
Sbjct: 121 EDVWILLRAGRLEEACGLCRSAGQPWRASSLCPFGGLNTFPSVEALVKNGKNRTLQAVEF 180

Query: 121 ESGIGQQWRLWKWASFCASEKIAEQNGGKYEVAVYASQCSDLKRMLPICTDWESACWAMA 180
           ESGIG QW LWKWASFCASEKIA+Q GGK E AVYA+QCS+LKRMLP+C DWESACWAMA
Sbjct: 181 ESGIGHQWHLWKWASFCASEKIADQ-GGKCEAAVYAAQCSNLKRMLPLCNDWESACWAMA 239

Query: 181 KSWLDVQVDLELARSQPGRIEQLKSYGDDIDGSPGQIDSASHPSIGPEGWPLHVLNQQPR 240
           KSWLDVQVDLE+ RS PG ++QL+++GD IDGSPG  D +  PS GPE WP+ VLNQQPR
Sbjct: 240 KSWLDVQVDLEITRSLPGGVDQLRTFGDVIDGSPGNADGSFEPSNGPENWPIQVLNQQPR 299

Query: 241 DFSALLQKLHSGETINEAVARGCKEQQRQIEMDLMLGNIPHLLDMIWAWITPSEDDQNVF 300
             S+LLQKLHSGE I+EAV R CKEQQRQI+M LMLG+IP +LD+IW+WI P+ED+QNVF
Sbjct: 300 QLSSLLQKLHSGEMIHEAVTRQCKEQQRQIQMTLMLGDIPRVLDLIWSWIAPTEDNQNVF 359

Query: 301 RPHGDPQMIRFGAHLVLVLRYLLAEEMKDSFREKLMNVGDLILHMYVMFLSQSNMKN--- 357
           RP GDPQMIRFGAHLVLVLRYLLAEEMKD+F++K+++VGD ILH+Y +FL     +    
Sbjct: 360 RPSGDPQMIRFGAHLVLVLRYLLAEEMKDTFKDKILSVGDNILHLYALFLFSKEHEELVG 419

Query: 358 --------------XLEFMLLSWHVTAALTFLCTXWNCGXIAVCISSIKF--FFLLWSIC 401
                          +  M L  H +  + +           + +S++++  F  +    
Sbjct: 420 IYASQLARHRCIDLFVHMMELRLHNSVHVKY----------KIFLSAMEYLPFSSMDDSK 469

Query: 402 HFLRRLIQKAVLK-KSLRASTITNVKDVSVKLLLRALMHSNI------------------ 442
                +IQ+ +L+ + ++     N+ DV+ +  L++L  + +                  
Sbjct: 470 GNFEDIIQRILLRSREIKVGKYDNLSDVAEQHRLQSLQKAKVIQWLCFTPPSTITNVKDV 529

Query: 443 --------------LFREFSLISMWRIPAMPIGAHTLLSLLAEPLKQLSEIPDTLEDY-F 487
                         LFREFSLISMWR+PAMPIGAHT+L  LAEPLKQL+E  +T EDY  
Sbjct: 530 SKKLLLRALIHSNILFREFSLISMWRVPAMPIGAHTVLGFLAEPLKQLAETLETSEDYNV 589

Query: 488 SENLKEFQDWSEYYSCDATYRNWLKIELENAEVPPFELSMXXXXXXXXXXXXXLNSSLSL 547
            E+L+EFQDW EYYSCDATYRNWLK E+ENAEVP  ELS+             L++SLSL
Sbjct: 590 FEDLREFQDWREYYSCDATYRNWLKTEVENAEVPISELSLEEKERAISAAKETLSASLSL 649

Query: 548 LLRKENPWLTPVEDQAYESAAPTFLELHATAMLCLPSGECMCPDATICTALMSALYSSVS 607
           L RKE PWL    D  YESA P FLELHATAMLCLPSGEC+CPDAT+CT L SALYSS  
Sbjct: 650 LKRKETPWLAST-DCMYESAEPVFLELHATAMLCLPSGECLCPDATVCTTLTSALYSSAG 708

Query: 608 EEIVLHRQLMVNVALSPRDNYCIEVVLRCLAVDGDGLGSHQANDGGILGTVMAAGFK 664
           +E+VL+RQLMVNV++S RD+YCI+VVLRCLA+ GDGL  H  NDGGILGT+MAAGFK
Sbjct: 709 DEVVLNRQLMVNVSISSRDSYCIDVVLRCLAIAGDGLEPHDLNDGGILGTIMAAGFK 765