Jatropha Genome Database

JcCA0305301.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0305301.10 + phase: 0 
         (282 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g22500.1                                                       339   2e-93
Glyma09g33130.1                                                       223   2e-58
Glyma10g00580.1                                                       181   1e-45
Glyma14g37190.1                                                       123   3e-28
Glyma02g39110.1                                                       122   3e-28
Glyma14g37210.1                                                       113   3e-25

>Glyma16g22500.1 
          Length = 304

 Score =  339 bits (869), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 162/291 (55%), Positives = 212/291 (72%), Gaps = 17/291 (5%)

Query: 8   LGFLASSLRNCLFSVLSVGPIPCHLAFIMDGNRRFAKKQKQGVVTGYRAGFTALMSIIKY 67
           LG L   LR C+F++LSVGP+P H+AFIMDGNRR+AKK+      G++AGFTALMSI++Y
Sbjct: 13  LGGLYCYLRRCMFAILSVGPVPSHIAFIMDGNRRYAKKRNMEEGDGHKAGFTALMSILRY 72

Query: 68  CSELGVKYVTIYAFSIDNFRREPEEVKIIMDLMLEKTEGILKEESVVHQYGVRVYFLGNL 127
           C ELGVKYVT+YAFSIDNF+R+P EV+ +M+LM EK E +L++ES++++YGVR++F+G+L
Sbjct: 73  CYELGVKYVTVYAFSIDNFKRKPNEVQSLMELMREKIEELLQQESLINEYGVRLHFIGDL 132

Query: 128 KLLCEPLRVAAEKVMKATASNTKLLLFICVAYTSLDEIIHAVHESCNDKLKNIILPDKPH 187
           +LL EP+  + EK M+ TA N + +L +C+AYTS  E++HAV E C +K   +    +  
Sbjct: 133 QLLTEPVIASVEKAMRVTAHNNQRVLLVCIAYTSRHEMVHAVQECCKEKWNEVQASKEAK 192

Query: 188 -------------TDXXXXXXXXXXXKDG----IKLVDIEKHMYMALGPEPDVLIRTSGE 230
                         +             G    IKLVDIEKHMYMA+ P+PD+LIRTSGE
Sbjct: 193 LTNGNDSEAEITSCNELVEMTEERKYNQGDVPLIKLVDIEKHMYMAVAPDPDILIRTSGE 252

Query: 231 SRLSNFLLWQTSHCTLYSPDALWPEIGLWNLVWAVLNFQRNHSYLEKKKKQ 281
           +RLSNFLLWQTS C LY+P ALWPEIGL +LVWAVLNFQR+H YLEKK+KQ
Sbjct: 253 ARLSNFLLWQTSTCPLYAPTALWPEIGLRHLVWAVLNFQRHHFYLEKKRKQ 303


>Glyma09g33130.1 
          Length = 362

 Score =  223 bits (568), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 101/173 (58%), Positives = 137/173 (79%)

Query: 8   LGFLASSLRNCLFSVLSVGPIPCHLAFIMDGNRRFAKKQKQGVVTGYRAGFTALMSIIKY 67
           LG L   LR C+F++LSVGP+P H+AFIMDGNRR+AKK+      G++AGFTALMSI++Y
Sbjct: 13  LGGLYYYLRRCMFAILSVGPVPSHIAFIMDGNRRYAKKRNMEEGDGHKAGFTALMSILRY 72

Query: 68  CSELGVKYVTIYAFSIDNFRREPEEVKIIMDLMLEKTEGILKEESVVHQYGVRVYFLGNL 127
           C ELGVKYVT+YAFSIDNF+R+P EV+ +M+LM EK E +L +ES++++YGVR++F+G+L
Sbjct: 73  CYELGVKYVTVYAFSIDNFKRKPNEVQSLMELMREKIEELLLQESLINEYGVRLHFIGDL 132

Query: 128 KLLCEPLRVAAEKVMKATASNTKLLLFICVAYTSLDEIIHAVHESCNDKLKNI 180
           +LL EP+R + EK M+ TA N + +L ICVAYTS  EI+HAV E C +K   +
Sbjct: 133 QLLTEPVRASVEKAMRVTAHNNQRVLLICVAYTSRHEIVHAVQECCKEKWNEV 185



 Score =  143 bits (361), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 65/78 (83%), Positives = 72/78 (92%)

Query: 204 IKLVDIEKHMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGLWNLVW 263
           IKLVDIEKHMYMA+ P+PD+LIRTSGE+RLSNFLLWQTS C LY+P ALWPEIGL +LVW
Sbjct: 284 IKLVDIEKHMYMAVAPDPDILIRTSGEARLSNFLLWQTSTCPLYAPTALWPEIGLRHLVW 343

Query: 264 AVLNFQRNHSYLEKKKKQ 281
           AVLNFQR+H YLEKKKKQ
Sbjct: 344 AVLNFQRHHFYLEKKKKQ 361


>Glyma10g00580.1 
          Length = 224

 Score =  181 bits (458), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/233 (43%), Positives = 142/233 (60%), Gaps = 46/233 (19%)

Query: 36  MDGNRRFAKKQKQGVVTGYRAGFTALMSIIKYCSELGVKYVTIYAFSIDNFRREPEEVKI 95
           MDGNRR+AKK+      G++AGFTALMSI++YC ELGVK               P+EV+ 
Sbjct: 1   MDGNRRYAKKRNMEEGDGHKAGFTALMSILRYCYELGVK--------------RPKEVQS 46

Query: 96  IMDLMLEKTEGILKEESVVHQYGVRVYFLGNLKLLCEPLRVAAEKVMKATASNTKLLLFI 155
           +M+LM EK E +LK+ES++++YGVR++F+G+++LL EP+RVA EK M+ TA N + +L I
Sbjct: 47  LMELMREKIEELLKQESLINEYGVRLHFIGDMQLLTEPVRVALEKAMRVTAHNNQRVLLI 106

Query: 156 CVAYTSLDEIIHAVHE--SCNDKLKNI----ILPDK-----------PHT---------- 188
           CVAYTS  EI+HAV E  SC D L        +P++            HT          
Sbjct: 107 CVAYTSRHEIVHAVQEFYSCKDYLNATKACSSVPNRVEGAGEKDGMLEHTVEKHSGNNSE 166

Query: 189 -DXXXXXXXXXXXKDG----IKLVDIEKHMYMALGPEPDVLIRTSGESRLSNF 236
            +           ++G    +KLVDIEK+MYMA+ P+PD+LIRTSGE++   F
Sbjct: 167 AEITSCNEMVEMTEEGEVPFVKLVDIEKNMYMAVAPDPDILIRTSGEAQTQQF 219


>Glyma14g37190.1 
          Length = 322

 Score =  123 bits (308), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/245 (32%), Positives = 125/245 (51%), Gaps = 19/245 (7%)

Query: 28  IPCHLAFIMDGNRRFAKKQKQGVVTGYRAGFTALMSIIKYCSELGVKYVTIYAFSIDNFR 87
           +P H+A IMDGN R+AK +      G++AG  +L  +++ C   G+K +T++AFS DN+ 
Sbjct: 89  MPKHVAVIMDGNGRWAKVKGLPPSAGHQAGVQSLRKMVRLCCSWGIKVLTVFAFSTDNWV 148

Query: 88  REPEEVKIIMDLMLEKTEGILKEESVVHQYGVRVYFLGNLKLLCEPLRVAAEKVMKATAS 147
           R   EV  +M L  E+T  I  E     + G+R+  +G+   L E L+       + T  
Sbjct: 149 RPKVEVDFLMRL-FERT--INSEVQTFKREGIRISVIGDSSRLPESLKRMIASAEEDTKQ 205

Query: 148 NTKLLLFICVAYTSLDEIIHAVHESCNDKLKNIILPDKPHTDXXXXXXXXXXXKDGIKLV 207
           N++  L + V Y+   +++ A  +S   K+K+  +    H D                ++
Sbjct: 206 NSRFQLIVAVGYSGKYDVVQAC-KSVAKKVKDGHI----HLDDINE-----------NII 249

Query: 208 DIEKHMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGLWNLVWAVLN 267
           + E        P PD+LIRTSGE R+SNFLLWQ ++  LY    LWP+ G    V A+ +
Sbjct: 250 EQELETNCTEFPYPDLLIRTSGELRVSNFLLWQLAYTELYFNRELWPDFGKDEFVDALSS 309

Query: 268 FQRNH 272
           FQ+  
Sbjct: 310 FQQRQ 314


>Glyma02g39110.1 
          Length = 250

 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/248 (32%), Positives = 129/248 (52%), Gaps = 19/248 (7%)

Query: 23  LSVGPIPCHLAFIMDGNRRFAKKQKQGVVTGYRAGFTALMSIIKYCSELGVKYVTIYAFS 82
           L+   +P H+A IMDGN R+AK +      G++AG  +L  +++ CS  G+K +T++AFS
Sbjct: 15  LAAEMMPKHVAVIMDGNGRWAKVKGLPPSAGHQAGVQSLRRMVRLCSSWGIKVLTVFAFS 74

Query: 83  IDNFRREPEEVKIIMDLMLEKTEGILKEESVVHQYGVRVYFLGNLKLLCEPLRVAAEKVM 142
            DN+ R   E   +M L  E T  I  E     + G+++  +G+   L E L+     V 
Sbjct: 75  TDNWVRPKLEFDFLMRL-FETT--INSEVQAFKREGIQISVIGDSSKLPESLKRMIVSVE 131

Query: 143 KATASNTKLLLFICVAYTSLDEIIHAVHESCNDKLKNIILPDKPHTDXXXXXXXXXXXKD 202
           + T  N++L L + ++Y+   +++ A  +S   K+K+    D  H D             
Sbjct: 132 EDTKHNSRLQLIVALSYSGKYDVVQAC-KSVAKKVKD----DHLHLDDINE--------- 177

Query: 203 GIKLVDIEKHMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGLWNLV 262
              +++ E        P PD+LIRTSGE R+SNFLLWQ ++  LY    LWP+ G    V
Sbjct: 178 --NIIEQELETNCTEFPYPDLLIRTSGELRVSNFLLWQLAYTELYFNQKLWPDFGKDEFV 235

Query: 263 WAVLNFQR 270
            A+ +FQ+
Sbjct: 236 DALSSFQQ 243


>Glyma14g37210.1 
          Length = 307

 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 19/247 (7%)

Query: 28  IPCHLAFIMDGNRRFAKKQKQGVVTGYRAGFTALMSIIKYCSELGVKYVTIYAFSIDNFR 87
           +P H+A I+DG+ R+AK +      G++AG   L ++++ C   G++ +T++  S +N+ 
Sbjct: 73  MPKHVAVIIDGHGRWAKLRGLPASAGHQAGVQPLRTVVRLCCSWGIQVLTVFVLSTENWF 132

Query: 88  REPEEVKIIMDLMLEKTEGILKEESVVHQYGVRVYFLGNLKLLCEPLRVAAEKVMKATAS 147
           R   EV  +M L  E T  I    + + + G+++Y +G+   L E LR       K+T  
Sbjct: 133 RPKVEVDSLMKL-FETT--INSSIACMKKEGIQIYVIGDSSKLPESLRSTIANAEKSTKH 189

Query: 148 NTKLLLFICVAYTSLDEIIHAVHESCNDKLKNIILPDKPHTDXXXXXXXXXXXKDGIKLV 207
           N++L L + + Y    +++ A  +S   K+K+ +L    H D               K++
Sbjct: 190 NSRLQLIVAMNYGGKYDVVQAC-KSVAKKVKDGLL----HLDNINE-----------KII 233

Query: 208 DIEKHMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGLWNLVWAVLN 267
           + E        P PD+LIR  GE RLSNFLLWQ ++   Y     WP+ G    V A+ +
Sbjct: 234 EKELETKCTEFPYPDLLIRAGGELRLSNFLLWQLAYTEFYFNKTPWPDFGKEEFVDALRS 293

Query: 268 FQRNHSY 274
           FQ+   +
Sbjct: 294 FQQRQRH 300