Jatropha Genome Database

JcCA0304431.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0304431.30 - phase: 1 /pseudo/partial
         (119 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g04720.1                                                       115   1e-26
Glyma04g04660.1                                                       114   2e-26
Glyma01g39790.1                                                       112   1e-25
Glyma17g18010.1                                                       111   1e-25
Glyma11g05500.1                                                       111   2e-25
Glyma05g21780.1                                                       109   8e-25
Glyma07g06490.1                                                       109   8e-25
Glyma16g03090.1                                                       108   1e-24
Glyma06g12190.1                                                        75   2e-14
Glyma15g00590.1                                                        71   2e-13
Glyma13g44710.1                                                        71   2e-13
Glyma08g23320.1                                                        69   1e-12
Glyma13g20810.1                                                        49   2e-06
Glyma13g20810.2                                                        48   2e-06
Glyma03g33850.1                                                        47   3e-06

>Glyma06g04720.1 
          Length = 522

 Score =  115 bits (288), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/65 (81%), Positives = 60/65 (92%)

Query: 54  SVLDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
           + LDPGNLE DLQAGAIAGYSLLWLL+WAT MGLLIQ+LSARVGVA GRHLA+LCR+EYP
Sbjct: 76  AFLDPGNLEGDLQAGAIAGYSLLWLLMWATFMGLLIQLLSARVGVATGRHLAELCRDEYP 135

Query: 114 NWSTI 118
           NW+ +
Sbjct: 136 NWARL 140


>Glyma04g04660.1 
          Length = 518

 Score =  114 bits (286), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 53/63 (84%), Positives = 59/63 (93%)

Query: 54  SVLDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
           + LDPGNLE DLQAGAIAGYSLLWLL+WAT MGLLIQ+LSARVGVA GRHLA+LCR+EYP
Sbjct: 72  AFLDPGNLEGDLQAGAIAGYSLLWLLMWATFMGLLIQLLSARVGVATGRHLAELCRDEYP 131

Query: 114 NWS 116
           NW+
Sbjct: 132 NWA 134


>Glyma01g39790.1 
          Length = 507

 Score =  112 bits (280), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 52/65 (80%), Positives = 59/65 (90%)

Query: 54  SVLDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
           + LDPGNLE DLQ+GAIAGYSLLWLL+WAT MGLLIQ+LSAR+GVA GRHLA+LCREEYP
Sbjct: 61  AFLDPGNLEGDLQSGAIAGYSLLWLLMWATAMGLLIQLLSARLGVATGRHLAELCREEYP 120

Query: 114 NWSTI 118
            W+ I
Sbjct: 121 TWARI 125


>Glyma17g18010.1 
          Length = 516

 Score =  111 bits (278), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 52/65 (80%), Positives = 59/65 (90%)

Query: 54  SVLDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
           + LDPGNLE DLQAGAIAGYSLLWLL+WAT MGLLIQ+LSAR+GVA G+HLA+LCREEYP
Sbjct: 70  AFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLIQLLSARLGVATGKHLAELCREEYP 129

Query: 114 NWSTI 118
            W+ I
Sbjct: 130 PWARI 134


>Glyma11g05500.1 
          Length = 506

 Score =  111 bits (278), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 51/65 (78%), Positives = 59/65 (90%)

Query: 54  SVLDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
           + LDPGNLE DLQ+GAIAGYSLLWLL+WAT MGL+IQ+LSAR+GVA GRHLA+LCREEYP
Sbjct: 61  AFLDPGNLEGDLQSGAIAGYSLLWLLMWATAMGLIIQLLSARLGVATGRHLAELCREEYP 120

Query: 114 NWSTI 118
            W+ I
Sbjct: 121 TWARI 125


>Glyma05g21780.1 
          Length = 516

 Score =  109 bits (272), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 50/63 (79%), Positives = 57/63 (90%)

Query: 54  SVLDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
           + LDPGNLE DLQAGAIAGYSLLWLL+WAT MGLLIQ+LSAR+GV  G+HLA+LCREEYP
Sbjct: 70  AFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLIQLLSARLGVVTGKHLAELCREEYP 129

Query: 114 NWS 116
            W+
Sbjct: 130 PWA 132


>Glyma07g06490.1 
          Length = 492

 Score =  109 bits (272), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 49/63 (77%), Positives = 59/63 (93%)

Query: 54  SVLDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
           + LDPGNLE DLQAGAIAGY+LLWLL+W+T+MGL+IQ+LSAR+GVA GRHLA+LCREEY 
Sbjct: 43  AFLDPGNLEGDLQAGAIAGYTLLWLLMWSTIMGLVIQLLSARLGVATGRHLAELCREEYS 102

Query: 114 NWS 116
           NW+
Sbjct: 103 NWA 105


>Glyma16g03090.1 
          Length = 524

 Score =  108 bits (270), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 50/63 (79%), Positives = 58/63 (92%)

Query: 54  SVLDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
           + LDPGNLE DLQAGAIAGYSLLWLL+W+T MGL+IQ+LSAR+GVA GRHLA+LCREEY 
Sbjct: 97  AFLDPGNLEGDLQAGAIAGYSLLWLLMWSTFMGLVIQLLSARLGVATGRHLAELCREEYS 156

Query: 114 NWS 116
           NW+
Sbjct: 157 NWA 159


>Glyma06g12190.1 
          Length = 544

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/58 (55%), Positives = 43/58 (74%)

Query: 56  LDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
           LDPGN+E DLQAGA   Y LLW+++   V  L+IQ L+A +GV  G+HL++LC+ EYP
Sbjct: 65  LDPGNMETDLQAGADHKYELLWVILIGLVFALIIQSLAANLGVTTGKHLSELCKAEYP 122


>Glyma15g00590.1 
          Length = 496

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/58 (51%), Positives = 42/58 (72%)

Query: 56  LDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
           +DPGN E DLQ+GA   Y LLW+++ A+   L+IQ ++A +GV  G+HLA+ CR EYP
Sbjct: 12  IDPGNFETDLQSGAQYKYELLWIILLASCAALVIQSMAANLGVVTGKHLAEHCRSEYP 69


>Glyma13g44710.1 
          Length = 494

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/58 (51%), Positives = 42/58 (72%)

Query: 56  LDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYP 113
           +DPGN E DLQ+GA   Y LLW+++ A+   L+IQ ++A +GV  G+HLA+ CR EYP
Sbjct: 12  IDPGNFETDLQSGAQYKYELLWIILLASCAALVIQSMAANLGVVTGKHLAEHCRAEYP 69


>Glyma08g23320.1 
          Length = 550

 Score = 68.9 bits (167), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 3/63 (4%)

Query: 56  LDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEY--- 112
           +DPGN E DLQ+GA   Y LLW+++ A+   LLIQ ++A +GV  G HLA+ CR EY   
Sbjct: 63  IDPGNFETDLQSGAQYKYELLWIILVASCAALLIQTMAANLGVVTGMHLAEHCRAEYSRV 122

Query: 113 PNW 115
           PN+
Sbjct: 123 PNF 125


>Glyma13g20810.1 
          Length = 1334

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 36/63 (57%)

Query: 56  LDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYPNW 115
           +DPG      + GA  G+ L+  ++      +  Q +SA++GV  G+ LA++C +EY NW
Sbjct: 33  VDPGKWVAIAEGGARFGFDLMAFMLIFNFAAIFCQYISAKIGVITGKDLAQICSDEYDNW 92

Query: 116 STI 118
           + +
Sbjct: 93  TCM 95


>Glyma13g20810.2 
          Length = 1313

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 36/63 (57%)

Query: 56  LDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYPNW 115
           +DPG      + GA  G+ L+  ++      +  Q +SA++GV  G+ LA++C +EY NW
Sbjct: 33  VDPGKWVAIAEGGARFGFDLMAFMLIFNFAAIFCQYISAKIGVITGKDLAQICSDEYDNW 92

Query: 116 STI 118
           + +
Sbjct: 93  TCM 95


>Glyma03g33850.1 
          Length = 1281

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 36/63 (57%)

Query: 56  LDPGNLERDLQAGAIAGYSLLWLLVWATVMGLLIQVLSARVGVAIGRHLAKLCREEYPNW 115
           +DPG     ++ GA  G+ L+ +++      +  Q +SAR+G   G+ LA++C +EY  W
Sbjct: 33  VDPGKWVATVEGGARFGFDLMAVMLIFNFAAIFCQYISARIGAITGKSLAQICSDEYDTW 92

Query: 116 STI 118
           + +
Sbjct: 93  TCM 95