Jatropha Genome Database
- JcCA0304251.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0304251.20 + phase: 0
(163 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma19g31280.1 191 3e-49
Glyma03g28530.1 190 5e-49
Glyma09g37020.3 66 1e-11
Glyma09g37020.2 66 1e-11
Glyma09g37020.1 66 2e-11
Glyma18g49660.1 65 2e-11
Glyma10g31590.1 51 6e-07
Glyma02g09650.1 49 2e-06
Glyma13g10360.1 47 7e-06
>Glyma19g31280.1
Length = 467
Score = 191 bits (485), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 89/109 (81%), Positives = 102/109 (93%), Gaps = 2/109 (1%)
Query: 15 RLEGRDVQKNAIAKMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVM 74
RL+ D++K I++MAH+H ALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSD+M
Sbjct: 233 RLQISDIRK--ISEMAHSHGALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDIM 290
Query: 75 AGVLAVKGQSLARDLYFLQNAEGSGLAPFDCWICLRGIKTMALRVEKQQ 123
AGVLAVKG+ L +++YFLQNAEGSGLAPFDCW+CLRGIKTMALR+EKQQ
Sbjct: 291 AGVLAVKGEKLEKEMYFLQNAEGSGLAPFDCWLCLRGIKTMALRIEKQQ 339
>Glyma03g28530.1
Length = 468
Score = 190 bits (483), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 89/109 (81%), Positives = 102/109 (93%), Gaps = 2/109 (1%)
Query: 15 RLEGRDVQKNAIAKMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVM 74
RL+ D+QK I+++AH+H ALVLVDNSIMSPVLS+PLELGADIVMHSATKFIAGHSD+M
Sbjct: 234 RLQISDIQK--ISEIAHSHGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDIM 291
Query: 75 AGVLAVKGQSLARDLYFLQNAEGSGLAPFDCWICLRGIKTMALRVEKQQ 123
AGVLAVKG+ L ++LYFLQNAEGSGLAPFDCW+CLRGIKTMALR+EKQQ
Sbjct: 292 AGVLAVKGEKLGKELYFLQNAEGSGLAPFDCWLCLRGIKTMALRIEKQQ 340
>Glyma09g37020.3
Length = 459
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Query: 26 IAKMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVMAGVL--AVKGQ 83
++++ H L+ +D + +P+ + L LGAD+++HS TK++ GH DV+ G + ++K
Sbjct: 313 VSELCHKKGTLLCIDGTFATPLNQKALALGADLILHSLTKYMGGHHDVLGGCISGSIKVV 372
Query: 84 SLARDLYFLQNAEGSGLAPFDCWICLRGIKTMALRVEKQQ 123
S R L+ + G L P ++ +RG+KT+ LRV++Q
Sbjct: 373 SQIRTLHHVL---GGTLNPNAAYLFIRGMKTLHLRVQQQN 409
>Glyma09g37020.2
Length = 459
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Query: 26 IAKMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVMAGVL--AVKGQ 83
++++ H L+ +D + +P+ + L LGAD+++HS TK++ GH DV+ G + ++K
Sbjct: 313 VSELCHKKGTLLCIDGTFATPLNQKALALGADLILHSLTKYMGGHHDVLGGCISGSIKVV 372
Query: 84 SLARDLYFLQNAEGSGLAPFDCWICLRGIKTMALRVEKQQ 123
S R L+ + G L P ++ +RG+KT+ LRV++Q
Sbjct: 373 SQIRTLHHVL---GGTLNPNAAYLFIRGMKTLHLRVQQQN 409
>Glyma09g37020.1
Length = 536
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Query: 26 IAKMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVMAGVL--AVKGQ 83
++++ H L+ +D + +P+ + L LGAD+++HS TK++ GH DV+ G + ++K
Sbjct: 313 VSELCHKKGTLLCIDGTFATPLNQKALALGADLILHSLTKYMGGHHDVLGGCISGSIKVV 372
Query: 84 SLARDLYFLQNAEGSGLAPFDCWICLRGIKTMALRVEKQQ 123
S R L+ + G L P ++ +RG+KT+ LRV++Q
Sbjct: 373 SQIRTLHHVL---GGTLNPNAAYLFIRGMKTLHLRVQQQN 409
>Glyma18g49660.1
Length = 568
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 26 IAKMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVMAGVLAVKGQSL 85
++++ H L+ +D + +P+ + L LGAD+++HS TK++ GH D + G ++ + +
Sbjct: 345 VSELCHKKGTLLCIDGTFATPLNQKALALGADLILHSLTKYMGGHHDALGGCISGSTKVV 404
Query: 86 ARDLYFLQNAEGSGLAPFDCWICLRGIKTMALRVEKQQ 123
++ + L + G L P ++ +RG+KT+ LRV++Q
Sbjct: 405 SQ-IRTLHHVLGGTLNPNAAYLFIRGMKTLHLRVQQQN 441
>Glyma10g31590.1
Length = 442
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 29 MAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVMAGVL 78
MAH V+VDN+ +P++ P LGAD+V+HS +KFI+G +D++AG +
Sbjct: 205 MAHRKGVTVVVDNTF-APMVLSPARLGADVVVHSISKFISGGADIIAGAV 253
>Glyma02g09650.1
Length = 440
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 28 KMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVMAGVL 78
++ H V+VDN+ +P++ P LGAD+V+HS +KFI+G +D++AG +
Sbjct: 204 RVGHAKGVTVVVDNTF-APMVISPARLGADVVVHSISKFISGGADIIAGAV 253
>Glyma13g10360.1
Length = 440
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 28 KMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVMAGVL 78
++ H V+ DN+ +P++ P LGAD+V+HS +KFI+G +D++AG +
Sbjct: 204 RVGHAKGVTVVTDNTF-APMVISPARLGADVVVHSISKFISGGADIIAGAV 253