Jatropha Genome Database
- JcCA0304251.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0304251.10 - phase: 0 /TE
(121 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma01g29320.1 64 3e-11
Glyma13g22440.1 55 2e-08
Glyma01g29330.1 55 2e-08
Glyma16g09250.1 54 5e-08
Glyma05g09010.1 53 8e-08
Glyma17g36120.1 52 1e-07
Glyma16g14490.1 50 4e-07
Glyma09g26090.1 50 4e-07
Glyma15g26820.1 50 5e-07
Glyma16g28890.1 50 8e-07
Glyma16g13610.1 50 8e-07
Glyma10g22170.1 49 1e-06
Glyma07g37310.2 49 1e-06
Glyma07g18520.1 48 2e-06
Glyma10g10160.1 48 2e-06
Glyma06g18690.1 48 3e-06
Glyma15g32290.1 47 3e-06
Glyma01g24090.1 47 3e-06
>Glyma01g29320.1
Length = 989
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 26 KVCHLKKALYALKQPPRDWFDRFSKAMISLGYQQRNVDHTTFIKNH-QGKIIILIV 80
KVC LKK+LY LKQ PR WF+RF + LGY Q DHT F K+ KI ILIV
Sbjct: 680 KVCRLKKSLYGLKQSPRAWFERFGTVVKGLGYIQSQADHTLFYKHSTNNKIAILIV 735
>Glyma13g22440.1
Length = 426
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 31 KKALYALKQPPRDWFDRFSKAMISLGYQQRNVDHTTFIKNH-QGKIIILIV 80
+K LY LKQ P+ WF RF+K M +LGY+Q D T FIK+ G + +L+V
Sbjct: 126 RKTLYGLKQSPQTWFGRFTKVMTALGYKQSQGDRTLFIKHSTSGGVTVLLV 176
>Glyma01g29330.1
Length = 1049
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 32/55 (58%)
Query: 26 KVCHLKKALYALKQPPRDWFDRFSKAMISLGYQQRNVDHTTFIKNHQGKIIILIV 80
KVC L+K L L Q PR WF RFS +++ G + DHT F KN I+L+V
Sbjct: 539 KVCRLRKLLNGLMQSPRSWFGRFSGVVLAFGLKLSQSDHTVFYKNTNLGSILLVV 593
>Glyma16g09250.1
Length = 1460
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 27 VCHLKKALYALKQPPRDWFDRFSKAMISLGYQQRNVDHTTFIKNHQGKIIILIV 80
VC L KA+Y LKQ PR W++ + +IS G+QQ D + I N G +++++
Sbjct: 1075 VCKLHKAIYGLKQAPRAWYESLTNTLISFGFQQSKCDPSLLIFNKHGCCLLILI 1128
>Glyma05g09010.1
Length = 915
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 27 VCHLKKALYALKQPPRDWFDRFSKAMISLGYQQRNVDHTTFIKNHQGKIIILIV 80
VC L KA Y LKQ PR WFDR ++ +G+ D + FI HQ + + V
Sbjct: 638 VCKLNKAFYGLKQAPRQWFDRLRSTLVQIGFVGSKCDPSLFIYTHQQHTVYIPV 691
>Glyma17g36120.1
Length = 1022
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 26 KVCHLKKALYALKQPPRDWFDRFSKAMISLGYQQRNVD---HTTFIKNHQGKIIILIV*S 82
KVC L K+LY LKQ P+ W +F + ++S G+ D ++ F + +G II L V
Sbjct: 669 KVCKLMKSLYGLKQAPKQWHQKFDEVVLSSGFVINQADKYLYSKFDTHGKGVIICLYVDD 728
Query: 83 MLIYGCTRRQ 92
MLI+G + Q
Sbjct: 729 MLIFGTDQDQ 738
>Glyma16g14490.1
Length = 2156
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 27 VCHLKKALYALKQPPRDWFDRFSKAMISLGYQQRNVDHTTFIKNHQGKIII 77
V LKKALY LKQ PR W++R ++ + GY++ +D T F+K ++I
Sbjct: 1203 VYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMI 1253
>Glyma09g26090.1
Length = 2169
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 27 VCHLKKALYALKQPPRDWFDRFSKAMISLGYQQRNVDHTTFIKNHQGKIII 77
V LKKALY LKQ PR W++R ++ + GY++ +D T F+K ++I
Sbjct: 1211 VYRLKKALYGLKQAPRAWYERLTELLTQQGYRKGGIDKTLFVKQDAENLMI 1261
>Glyma15g26820.1
Length = 1563
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 27 VCHLKKALYALKQPPRDWFDRFSKAMISLGYQQRNVDHTTFIKNHQGKIII 77
V LKKALY LKQ PR W++R ++ + GY++ +D T F+K ++I
Sbjct: 1207 VYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMI 1257
>Glyma16g28890.1
Length = 2359
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 27 VCHLKKALYALKQPPRDWFDRFSKAMISLGYQQRNVDHTTFIKNHQGKIIILIV 80
VC LK++LY LKQ PR WF++F ++ + Q D + F++ I++L+V
Sbjct: 1275 VCKLKRSLYGLKQAPRVWFEKFRSILLVFEFTQSQYDPSLFLQRTPKGIVVLLV 1328
>Glyma16g13610.1
Length = 2095
Score = 49.7 bits (117), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 27 VCHLKKALYALKQPPRDWFDRFSKAMISLGYQQRNVDHTTF-IKNHQGKIIILIV 80
VC L+++LY LKQ PR WF +FS + G ++ DH+ F GK + L+V
Sbjct: 1506 VCKLRRSLYGLKQSPRAWFGKFSHVVQMFGLKRSEADHSVFYYHTSPGKCVYLMV 1560
>Glyma10g22170.1
Length = 2027
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 27 VCHLKKALYALKQPPRDWFDRFSKAMISLGYQQRNVDHTTFIKNHQGKIII 77
V LKKALY LKQ PR W++R ++ + GY++ +D T F+K ++I
Sbjct: 1091 VYRLKKALYGLKQAPRAWYERPTEFLTQQGYRKGGIDKTLFVKQDAENLMI 1141
>Glyma07g37310.2
Length = 1310
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 27 VCHLKKALYALKQPPRDWFDRFSKAMISLGYQQRNVDHTTF-IKNHQGKIIILIV 80
VC L+++LY LKQ PR WF +FS + G ++ DH+ F + GK + LIV
Sbjct: 525 VCKLRRSLYGLKQSPRAWFGKFSHIVQLFGLKRSEADHSVFYCHSSPGKCVYLIV 579
>Glyma07g18520.1
Length = 1102
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 27 VCHLKKALYALKQPPRDWFDRFSKAMISLGYQQRNVDHTTF-IKNHQGKIIILIV 80
VC L+++LY LKQ PR WF +FS + G ++ DH+ F GK + L+V
Sbjct: 730 VCKLRRSLYGLKQSPRAWFGKFSHVVQMFGLKRSEADHSVFYYHTSPGKCVYLMV 784
>Glyma10g10160.1
Length = 2160
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 27 VCHLKKALYALKQPPRDWFDRFSKAMISLGYQQRNVDHTTF-IKNHQGKIIILIV 80
VC L ++LY LKQ PR WF +FS + G ++ DH+ F GK + L+V
Sbjct: 1788 VCKLHRSLYGLKQSPRAWFGKFSHVVHMFGLKRSEADHSVFYCHTSPGKCVYLMV 1842
>Glyma06g18690.1
Length = 1169
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 27 VCHLKKALYALKQPPRDWFDRFSKAMISLGYQQRNVDHTTFIK---NHQGKIIILIV*SM 83
VC LKK+LY LKQ PR W+ RF MI +GY + D + K ++ ++L V M
Sbjct: 791 VCLLKKSLYGLKQSPRQWYKRFDSFMIDIGYIRSEYDSCVYHKKLFDNTYIYLLLYVDDM 850
Query: 84 LI 85
LI
Sbjct: 851 LI 852
>Glyma15g32290.1
Length = 2173
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 27 VCHLKKALYALKQPPRDWFDRFSKAMISLGYQQRNVDHTTFIKNH 71
V LKKALY LKQ PR W++R ++ + GY++ +D T F+++
Sbjct: 1208 VYRLKKALYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFMQSE 1252
>Glyma01g24090.1
Length = 2095
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 27 VCHLKKALYALKQPPRDWFDRFSKAMISLGYQQRNVDHTTFIKNHQGKIII 77
V LKKA Y LKQ PR W++R ++ + GY++ +D T F+K ++I
Sbjct: 1101 VYRLKKAHYGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMI 1151