Jatropha Genome Database

JcCA0304141.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0304141.30 - phase: 0 /partial
         (295 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g08810.1                                                       484   e-137
Glyma04g08710.1                                                       483   e-137

>Glyma06g08810.1 
          Length = 983

 Score =  484 bits (1245), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 225/295 (76%), Positives = 256/295 (86%)

Query: 1   VVHTQAKVIADQEVMYKYISRNLLFVVTVAPKAAGGIGSATPDESWLVAYLIDTITGRIL 60
           VVHTQAKV+ D +VMYKY+S+N+LFV   APKA G IG+ATP+E+ LV Y+IDT+TGR+L
Sbjct: 689 VVHTQAKVMTDHDVMYKYVSKNVLFVANAAPKARGEIGTATPEEALLVIYIIDTVTGRVL 748

Query: 61  HRMTHHGSHGPVRAVFSENWVVYHYFNLKAHRYEMSVIEIYDQSRADNKDVLKLVLGKHN 120
           HRM HHG  GPV AVFSENWVVYHYFNL+AHRYEMSV+E+YDQSRADNKDV K VLGKHN
Sbjct: 749 HRMAHHGCQGPVHAVFSENWVVYHYFNLRAHRYEMSVVEVYDQSRADNKDVWKFVLGKHN 808

Query: 121 LTAPVSSYSRPEVTTKSQSYYFTHSVKAIAVTFTAKGITSKQLLIGTIGDQVLALDKRFL 180
           LT+P+SSY RPEV TKSQSY+FTHSVKAI VT TAKGITSKQLLIGTIGDQVLALDKRFL
Sbjct: 809 LTSPISSYYRPEVVTKSQSYFFTHSVKAIEVTSTAKGITSKQLLIGTIGDQVLALDKRFL 868

Query: 181 DPRRTINPTQAEKEEGIIPLTDSLPIIPQSYVTHALQVEGLRGIISAPAKLESTTLVFVY 240
           DPRRT+NP+QAEKEEGIIPLTDSLPII QSY+TH+L+VEGLRGI++ PAKLEST+LVF Y
Sbjct: 869 DPRRTLNPSQAEKEEGIIPLTDSLPIISQSYITHSLKVEGLRGIVTVPAKLESTSLVFAY 928

Query: 241 GVDLFFTRLAPSRTYDSLTEDFSYXXXXXXXXXXXXXXXXXWILSERKELQDKWR 295
           GVDLFFT++APSRTYDSLTEDFSY                 W+LS+RK+LQ+KWR
Sbjct: 929 GVDLFFTQIAPSRTYDSLTEDFSYALLLLTIVALVAAIFVTWVLSQRKDLQEKWR 983


>Glyma04g08710.1 
          Length = 983

 Score =  483 bits (1244), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 226/295 (76%), Positives = 257/295 (87%)

Query: 1   VVHTQAKVIADQEVMYKYISRNLLFVVTVAPKAAGGIGSATPDESWLVAYLIDTITGRIL 60
           VVHTQAKV+ D +VMYKY+S+N+LFV   APKA+G IG+ATP+E+ LV Y+IDT+TGRIL
Sbjct: 689 VVHTQAKVMTDHDVMYKYVSKNVLFVANAAPKASGEIGTATPEEASLVIYIIDTVTGRIL 748

Query: 61  HRMTHHGSHGPVRAVFSENWVVYHYFNLKAHRYEMSVIEIYDQSRADNKDVLKLVLGKHN 120
           HRMTHHG  GPV AVFSENWVVYHYFNL+AHRYEMSV+E+YDQSRADNKDV K VLGKHN
Sbjct: 749 HRMTHHGCQGPVHAVFSENWVVYHYFNLRAHRYEMSVVEVYDQSRADNKDVWKFVLGKHN 808

Query: 121 LTAPVSSYSRPEVTTKSQSYYFTHSVKAIAVTFTAKGITSKQLLIGTIGDQVLALDKRFL 180
           LT+P+SSY R EV TKSQSY+FTHSVKAI VT TAKGITSKQLLIGTIGDQVLALDKRFL
Sbjct: 809 LTSPISSYYRAEVVTKSQSYFFTHSVKAIEVTSTAKGITSKQLLIGTIGDQVLALDKRFL 868

Query: 181 DPRRTINPTQAEKEEGIIPLTDSLPIIPQSYVTHALQVEGLRGIISAPAKLESTTLVFVY 240
           DPRRT+NP+QAEKEEGIIPLTDSLPII QSY+TH+L+VEGLRGI++ PAKLEST+LVF Y
Sbjct: 869 DPRRTLNPSQAEKEEGIIPLTDSLPIISQSYITHSLKVEGLRGIVTVPAKLESTSLVFAY 928

Query: 241 GVDLFFTRLAPSRTYDSLTEDFSYXXXXXXXXXXXXXXXXXWILSERKELQDKWR 295
           GVDLFFT++APSRTYDSLTEDFSY                 W+LS+RK+LQ+KWR
Sbjct: 929 GVDLFFTQIAPSRTYDSLTEDFSYALLLLTIVALVAAIFVTWVLSQRKDLQEKWR 983