Jatropha Genome Database

JcCA0304141.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0304141.20 - phase: 0 
         (350 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g08800.1                                                       184   1e-46
Glyma04g08700.1                                                       174   2e-43
Glyma02g11480.1                                                        60   5e-09
Glyma07g33730.1                                                        59   6e-09

>Glyma06g08800.1 
          Length = 307

 Score =  184 bits (467), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/249 (51%), Positives = 149/249 (59%), Gaps = 15/249 (6%)

Query: 93  FTQWRFPLVNSPLHQHSPAETITQPKTDSPRALVPLPPPIHSDELQELFREAELQLSTGS 152
           FTQWRF         +S        +T++     P PP IH+  LQELF   ELQL+T  
Sbjct: 61  FTQWRFSPPTPTTTTNS-----NLIQTNTNPPSPPPPPQIHN--LQELFHILELQLTTDP 113

Query: 153 ESEKLAALHLLERSLVPNPPSDPVCPLE-LMRGVVVNLKNKAGAKAATKILLALCLAEGN 211
            S     L+LLERSLVPNPP +       LMR +  NL   A AK ATKIL ALCL++ N
Sbjct: 114 TS----VLNLLERSLVPNPPQNQPPCPPNLMRALTANL---ATAKPATKILFALCLSDAN 166

Query: 212 RHXXXXXXXXXXXXXXXXXXXXPVAERALAALELMCTVEEGAAELRAHALAMPVMVAKMG 271
           R                       AERALAALELMCT+ EGA ELRAHALA+PVMV  M 
Sbjct: 167 RRVAVETGAVSAVVEAAPDLDGAPAERALAALELMCTLPEGAEELRAHALAVPVMVTMMA 226

Query: 272 EMEGRGKEYAISALSVVYGGGVLDEQVHQAPPEEVARAVILALQGDCTARARRKGAQLLK 331
           +   RGKEYAI  L+VVYG     E+ H APPEEVARAV LALQG+C+AR RRKGAQLLK
Sbjct: 227 KTAARGKEYAIGVLAVVYGSVGGGEEHHTAPPEEVARAVELALQGECSARGRRKGAQLLK 286

Query: 332 ALQEFGRAD 340
            LQ+  +A+
Sbjct: 287 TLQQLSQAE 295


>Glyma04g08700.1 
          Length = 255

 Score =  174 bits (440), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/210 (55%), Positives = 134/210 (63%), Gaps = 11/210 (5%)

Query: 132 IHSDELQELFREAELQLSTGSESEKLAALHLLERSLVPNPPSDPVCPLE-LMRGVVVNLK 190
           IH+  LQELF  +E QLST   S    AL+LLERSLVPNPP +       LMR +  NL 
Sbjct: 50  IHN--LQELFHISEFQLSTDPTS----ALNLLERSLVPNPPQEQPPCPPNLMRALTANL- 102

Query: 191 NKAGAKAATKILLALCLAEGNRHXXXXXXXXXXXXXXXXXXXXPVAERALAALELMCTVE 250
             A AK ATKIL ALCL++ NR                       AERALAALELMCT+ 
Sbjct: 103 --AQAKPATKILFALCLSDANRRVAVEAGAVSAVVEAAPDLDGAPAERALAALELMCTLP 160

Query: 251 EGAAELRAHALAMPVMVAKMGEMEGRGKEYAISALSVVYGGGVLDEQVHQAPPEEVARAV 310
           EGA ELRAHALA+PVMV  M +   RGKEYAI AL+VVYG     E  + APPEEVARAV
Sbjct: 161 EGAEELRAHALAVPVMVTMMAKTAARGKEYAIGALAVVYGAAG-AENHYTAPPEEVARAV 219

Query: 311 ILALQGDCTARARRKGAQLLKALQEFGRAD 340
            LALQG+C+AR RRKG QLLK LQ+  +A+
Sbjct: 220 ELALQGECSARGRRKGTQLLKTLQQLSQAE 249


>Glyma02g11480.1 
          Length = 415

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 6/173 (3%)

Query: 180 ELMRGVVVNLKNKAGAKAATKI----LLALCLAEGNRHXXXXXXXXXXXXXXXXXXXXPV 235
           E+  GVV  L++      A KI    L ALCL +  R                       
Sbjct: 234 EIYDGVVDLLRSPISHPRALKIGIKALFALCLVKNTRQKAVDAGTPAVLVDRLADFEKCD 293

Query: 236 AERALAALELMCTVEEGAAELRAHALAMPVMVAKMGEMEGRGKEYAISALSVVYGGGVLD 295
           AERALA +EL+C +  G      HAL +P++V  + ++  R  EYA  AL  +      +
Sbjct: 294 AERALATVELLCRIPAGCEAFAGHALTVPMLVKIILKISDRATEYAAGALLSLCSES--E 351

Query: 296 EQVHQAPPEEVARAVILALQGDCTARARRKGAQLLKALQEFGRADSTQQDVNE 348
               +A    V   ++L +Q DCT RA+RK   LLK L++    DS   + ++
Sbjct: 352 RCQREAVAAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPQDSIGNNSDD 404


>Glyma07g33730.1 
          Length = 414

 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 76/167 (45%), Gaps = 6/167 (3%)

Query: 180 ELMRGVVVNLKNKAGAKAATKI----LLALCLAEGNRHXXXXXXXXXXXXXXXXXXXXPV 235
           E+  GVV  L++      A KI    L ALCL +  R                       
Sbjct: 234 EIYDGVVDLLRSPISHPRALKIGIKALFALCLVKNTRQKAVAAGAPAVLVDRLADFEKCD 293

Query: 236 AERALAALELMCTVEEGAAELRAHALAMPVMVAKMGEMEGRGKEYAISALSVVYGGGVLD 295
           AERALA +EL+C +  G A   AHAL +P++V  + ++  R  EYA  AL  +      +
Sbjct: 294 AERALATVELLCRIPAGCAAFAAHALTVPMLVKIILKISNRATEYAAGALLSLCSES--E 351

Query: 296 EQVHQAPPEEVARAVILALQGDCTARARRKGAQLLKALQEFGRADST 342
               +A    V   ++L +Q DCT RA+RK   LLK L++    DS 
Sbjct: 352 RCQREAVAAGVLTQLLLLMQSDCTERAKRKAQMLLKLLRDSWPQDSV 398