Jatropha Genome Database

JcCA0303171.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0303171.20 - phase: 0 /partial
         (286 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g27260.1                                                       486   e-138
Glyma02g27260.2                                                       486   e-137

>Glyma02g27260.1 
          Length = 584

 Score =  486 bits (1252), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 230/286 (80%), Positives = 254/286 (88%)

Query: 1   VGAHGTGARLPPIDEQVISMKLVTPAKGTIEISKEKDPELFYLARCGLGGLGVVAEVTLQ 60
           VGAHGTGARLPPIDEQVI+MKLVTPAKGTIEISK+KDPELFYLARCGLGGLGVVAEVTLQ
Sbjct: 200 VGAHGTGARLPPIDEQVIAMKLVTPAKGTIEISKDKDPELFYLARCGLGGLGVVAEVTLQ 259

Query: 61  CVERQELVEHTYISNMKDIKKNHKKLLSENKHVKYLYIPYTDSVVIVTCNPISKWKGPPK 120
           CV+RQELVEHT +S M +IKKNHKKLLSENKHVKYLYIPYTDSVV+V CNP+SKWKGPPK
Sbjct: 260 CVDRQELVEHTVVSTMNEIKKNHKKLLSENKHVKYLYIPYTDSVVVVRCNPVSKWKGPPK 319

Query: 121 FKPKYSKDEAIEHVRDLYKESLKKYRTGEIAAKAVDKDETNINELSFTELRDKLLALDPL 180
           FKP+Y+KDEAI+HVRDLY+ESLKKY       K+ +  E NI+ELSFTELRDKL+ALDPL
Sbjct: 320 FKPQYTKDEAIQHVRDLYQESLKKYGAEGSKGKSAEDGEQNIDELSFTELRDKLIALDPL 379

Query: 181 NKDHVIKVNQAEAEFWKKSEGYRVGWSDEILGFDCGGQQWVSETCFPAGTLSKPSMKDLE 240
           +K H+I +N+AEAEFW+KSEGYRVGWSDEILGFDCGGQQWVSETCFPAG L+ PSMKDLE
Sbjct: 380 DKKHIININKAEAEFWRKSEGYRVGWSDEILGFDCGGQQWVSETCFPAGKLANPSMKDLE 439

Query: 241 YIEELKQLIDKEDIPAPAPIEQRWTACXXXXXXXXXXXXKDDIFSW 286
           YIEELKQLI+KE+IPAPAPIEQRWTA             +DDIFSW
Sbjct: 440 YIEELKQLIEKEEIPAPAPIEQRWTASSRSSLSPASSPSEDDIFSW 485


>Glyma02g27260.2 
          Length = 492

 Score =  486 bits (1251), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 230/286 (80%), Positives = 254/286 (88%)

Query: 1   VGAHGTGARLPPIDEQVISMKLVTPAKGTIEISKEKDPELFYLARCGLGGLGVVAEVTLQ 60
           VGAHGTGARLPPIDEQVI+MKLVTPAKGTIEISK+KDPELFYLARCGLGGLGVVAEVTLQ
Sbjct: 200 VGAHGTGARLPPIDEQVIAMKLVTPAKGTIEISKDKDPELFYLARCGLGGLGVVAEVTLQ 259

Query: 61  CVERQELVEHTYISNMKDIKKNHKKLLSENKHVKYLYIPYTDSVVIVTCNPISKWKGPPK 120
           CV+RQELVEHT +S M +IKKNHKKLLSENKHVKYLYIPYTDSVV+V CNP+SKWKGPPK
Sbjct: 260 CVDRQELVEHTVVSTMNEIKKNHKKLLSENKHVKYLYIPYTDSVVVVRCNPVSKWKGPPK 319

Query: 121 FKPKYSKDEAIEHVRDLYKESLKKYRTGEIAAKAVDKDETNINELSFTELRDKLLALDPL 180
           FKP+Y+KDEAI+HVRDLY+ESLKKY       K+ +  E NI+ELSFTELRDKL+ALDPL
Sbjct: 320 FKPQYTKDEAIQHVRDLYQESLKKYGAEGSKGKSAEDGEQNIDELSFTELRDKLIALDPL 379

Query: 181 NKDHVIKVNQAEAEFWKKSEGYRVGWSDEILGFDCGGQQWVSETCFPAGTLSKPSMKDLE 240
           +K H+I +N+AEAEFW+KSEGYRVGWSDEILGFDCGGQQWVSETCFPAG L+ PSMKDLE
Sbjct: 380 DKKHIININKAEAEFWRKSEGYRVGWSDEILGFDCGGQQWVSETCFPAGKLANPSMKDLE 439

Query: 241 YIEELKQLIDKEDIPAPAPIEQRWTACXXXXXXXXXXXXKDDIFSW 286
           YIEELKQLI+KE+IPAPAPIEQRWTA             +DDIFSW
Sbjct: 440 YIEELKQLIEKEEIPAPAPIEQRWTASSRSSLSPASSPSEDDIFSW 485