Jatropha Genome Database

JcCA0302361.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0302361.30 - phase: 0 
         (198 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g29680.1                                                       199   2e-51
Glyma20g37630.1                                                       159   2e-39
Glyma08g19750.1                                                       119   2e-27
Glyma15g05270.1                                                       119   2e-27
Glyma04g11490.1                                                       106   2e-23

>Glyma10g29680.1 
          Length = 380

 Score =  199 bits (505), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 90/157 (57%), Positives = 121/157 (77%)

Query: 41  LPAEDDAQPVEKVGPSMVFLPPSTTQKERDNVLASAKGAVALSGSAAMGMVGPALGLMDI 100
           +  EDD    +KVGP+M+FLP   ++KE  +++A+ K    L+G+ A G +GP +GL+DI
Sbjct: 220 MDTEDDESDHDKVGPAMLFLPSRPSKKEWSDIVAATKNGFGLTGTVATGGIGPTMGLVDI 279

Query: 101 GESDDAYLFRVSLPGVARDEKEFSCDIEPDGTILIKGVTTTGEKTVCKNSQIFRMQTQNL 160
           GE +DAYLFR+SLPGV R+E+EFSC++  DG +LI GVTTTGE TV + SQ+F MQT+NL
Sbjct: 280 GECEDAYLFRLSLPGVKRNEREFSCEVGTDGKVLISGVTTTGENTVSRYSQVFEMQTRNL 339

Query: 161 CPPGHFSITFQLPGPVNHKQFRGHFGNDGMLEGIVKK 197
           CPPG FS++FQLPGPV+  QF G+FG DG+LEG+V K
Sbjct: 340 CPPGQFSVSFQLPGPVDPHQFSGNFGIDGILEGVVMK 376


>Glyma20g37630.1 
          Length = 376

 Score =  159 bits (402), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 80/157 (50%), Positives = 105/157 (66%), Gaps = 20/157 (12%)

Query: 41  LPAEDDAQPVEKVGPSMVFLPPSTTQKERDNVLASAKGAVALSGSAAMGMVGPALGLMDI 100
           +  EDD    +KVGP+M+FLP   ++KE  +++A+ K   AL+G+ AMG +GP +GL+DI
Sbjct: 236 MDTEDDESDPDKVGPAMLFLPSRPSKKEWSDIVAATKNGFALTGTVAMGGIGPTMGLVDI 295

Query: 101 GESDDAYLFRVSLPGVARDEKEFSCDIEPDGTILIKGVTTTGEKTVCKNSQIFRMQTQNL 160
           GE +DAYLFR+SLPGV RDE+EFSC++  DG +LI GVTTTGE TV + S          
Sbjct: 296 GECEDAYLFRLSLPGVKRDEREFSCEVGTDGKVLISGVTTTGENTVSRYS---------- 345

Query: 161 CPPGHFSITFQLPGPVNHKQFRGHFGNDGMLEGIVKK 197
                     QLPGPV+  QF G+FG DG+LEGIV K
Sbjct: 346 ----------QLPGPVDPHQFSGNFGTDGILEGIVMK 372


>Glyma08g19750.1 
          Length = 394

 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/126 (47%), Positives = 87/126 (69%), Gaps = 2/126 (1%)

Query: 74  ASAKGAVALSGSAAMGMVGPALGLMDIGESDDAYLFRVSLPGVARD-EKEFSCDIEPDGT 132
            +   ++ L G+A  G  GP++G++DIG S  AYLFRVSLPGV +D   +FSCDIE DG 
Sbjct: 270 CNGDSSLILKGTARRGPFGPSVGVVDIGISKVAYLFRVSLPGVKKDFTGQFSCDIESDGR 329

Query: 133 ILIKGVTTTGEKTVCKNSQIFRMQTQNLCPPGHFSITFQLPGPVNHKQFRGHFGNDGMLE 192
           + I+GV T G  T+ K S++F+M+ + LC PG F+++F LPGPV+ + F  +F  DG+ E
Sbjct: 330 VQIRGVLTGGS-TITKQSRVFQMKIRQLCSPGPFTLSFSLPGPVDPRLFAPNFRPDGIFE 388

Query: 193 GIVKKK 198
           G+V K+
Sbjct: 389 GVVIKQ 394


>Glyma15g05270.1 
          Length = 373

 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 58/122 (47%), Positives = 87/122 (71%), Gaps = 2/122 (1%)

Query: 78  GAVALSGSAAMGMVGPALGLMDIGESDDAYLFRVSLPGVARD-EKEFSCDIEPDGTILIK 136
            ++ L+G+A  G  GP++G++DIG S  AYLFR+SLPGV +D   +FSCDIE DG + I+
Sbjct: 253 SSLILTGAARRGPFGPSVGVVDIGISKVAYLFRISLPGVKKDCTGQFSCDIESDGRVQIR 312

Query: 137 GVTTTGEKTVCKNSQIFRMQTQNLCPPGHFSITFQLPGPVNHKQFRGHFGNDGMLEGIVK 196
           GV T G  T+ K S++F+M+ + LC PG F+++F LPGPV+ + F  +F  DG+ EG++ 
Sbjct: 313 GVLTGGS-TITKQSRVFKMKIRQLCSPGPFTLSFSLPGPVDPRLFAPNFRPDGIFEGVII 371

Query: 197 KK 198
           K+
Sbjct: 372 KQ 373


>Glyma04g11490.1 
          Length = 99

 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 49/76 (64%), Positives = 59/76 (77%)

Query: 122 EFSCDIEPDGTILIKGVTTTGEKTVCKNSQIFRMQTQNLCPPGHFSITFQLPGPVNHKQF 181
           EFSC++  +G +LI GVTTTGE  V + SQ+F MQT NLCP G FSI+FQLPGPV+  QF
Sbjct: 5   EFSCEVGTNGKVLISGVTTTGENIVSQYSQVFEMQTHNLCPSGQFSISFQLPGPVDPHQF 64

Query: 182 RGHFGNDGMLEGIVKK 197
            G+FG DG+LEGIV K
Sbjct: 65  SGNFGTDGILEGIVMK 80