Jatropha Genome Database

JcCA0302221.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0302221.20 - phase: 0 /partial
         (169 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g38950.3                                                       224   4e-59
Glyma10g44180.1                                                       217   5e-57
Glyma20g38950.1                                                       217   6e-57
Glyma19g29920.1                                                       178   3e-45
Glyma03g00800.1                                                       177   7e-45
Glyma10g44180.3                                                       174   4e-44
Glyma13g12520.1                                                       170   7e-43
Glyma19g29880.1                                                       169   1e-42
Glyma11g17780.1                                                       161   3e-40
Glyma20g38950.2                                                       129   2e-30
Glyma10g44180.2                                                       128   3e-30

>Glyma20g38950.3 
          Length = 624

 Score =  224 bits (570), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 115/160 (71%), Positives = 129/160 (80%), Gaps = 4/160 (2%)

Query: 3   QRVTDADLLALVSDEVFQPEIVWQLGDLQITCGTLGLSTATVKLIDANGEQHIACSVGTG 62
           +RVTDADL ALVSDEVFQ E VW+LGDLQ+TCGTLGLSTATVKL+ ++G  H+ACSVGTG
Sbjct: 457 KRVTDADLRALVSDEVFQAEPVWKLGDLQVTCGTLGLSTATVKLLSSDGSTHVACSVGTG 516

Query: 63  PVDAAYKAVDLIVKEPVELLEYSMTAVTGGIDAIATTRVLICGDNH----KIDAITGEPS 118
           PVD+AYKAVDLIVKEPV LLEYSM AVT GIDAIATTRV+I G++        A+TGE  
Sbjct: 517 PVDSAYKAVDLIVKEPVTLLEYSMNAVTEGIDAIATTRVVIRGESETSTSTTHALTGEAV 576

Query: 119 RRTFSGSGAGMDIVVSSVKAYIGALNKMLAVNSQQLSTTK 158
            RTFSG+GAGMD+VVSSVKAYI ALNKML       S  K
Sbjct: 577 LRTFSGTGAGMDVVVSSVKAYIAALNKMLGFKETSPSAEK 616


>Glyma10g44180.1 
          Length = 620

 Score =  217 bits (552), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 112/160 (70%), Positives = 127/160 (79%), Gaps = 4/160 (2%)

Query: 3   QRVTDADLLALVSDEVFQPEIVWQLGDLQITCGTLGLSTATVKLIDANGEQHIACSVGTG 62
           +RVTDADL ALVSDEVFQ E VW+LGDLQ+TCGTLGLSTATVKL+ ++G  H+ACS+GTG
Sbjct: 453 KRVTDADLRALVSDEVFQAEPVWKLGDLQVTCGTLGLSTATVKLLSSDGSTHVACSIGTG 512

Query: 63  PVDAAYKAVDLIVKEPVELLEYSMTAVTGGIDAIATTRVLICGDNH----KIDAITGEPS 118
           PVD+AYKAVDLIVKE V LLEYSM AVT GIDAIATTRV+I G++        A+TGE  
Sbjct: 513 PVDSAYKAVDLIVKEQVTLLEYSMNAVTEGIDAIATTRVVIRGESETSTITTHALTGETV 572

Query: 119 RRTFSGSGAGMDIVVSSVKAYIGALNKMLAVNSQQLSTTK 158
            RTFSG+GAGMD+VVSSVKAYI ALNKM        S  K
Sbjct: 573 IRTFSGTGAGMDVVVSSVKAYIAALNKMSGFKESSQSAEK 612


>Glyma20g38950.1 
          Length = 632

 Score =  217 bits (552), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 115/168 (68%), Positives = 129/168 (76%), Gaps = 12/168 (7%)

Query: 3   QRVTDADLLALVSDEVFQPEIVWQLGDLQ--------ITCGTLGLSTATVKLIDANGEQH 54
           +RVTDADL ALVSDEVFQ E VW+LGDLQ        +TCGTLGLSTATVKL+ ++G  H
Sbjct: 457 KRVTDADLRALVSDEVFQAEPVWKLGDLQPINIYLVQVTCGTLGLSTATVKLLSSDGSTH 516

Query: 55  IACSVGTGPVDAAYKAVDLIVKEPVELLEYSMTAVTGGIDAIATTRVLICGDNH----KI 110
           +ACSVGTGPVD+AYKAVDLIVKEPV LLEYSM AVT GIDAIATTRV+I G++       
Sbjct: 517 VACSVGTGPVDSAYKAVDLIVKEPVTLLEYSMNAVTEGIDAIATTRVVIRGESETSTSTT 576

Query: 111 DAITGEPSRRTFSGSGAGMDIVVSSVKAYIGALNKMLAVNSQQLSTTK 158
            A+TGE   RTFSG+GAGMD+VVSSVKAYI ALNKML       S  K
Sbjct: 577 HALTGEAVLRTFSGTGAGMDVVVSSVKAYIAALNKMLGFKETSPSAEK 624


>Glyma19g29920.1 
          Length = 556

 Score =  178 bits (451), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 90/148 (60%), Positives = 115/148 (77%), Gaps = 2/148 (1%)

Query: 2   SQRVTDADLLALVSDEVFQPEIVWQLGDLQITCGTLGLSTATVKLIDANGEQHIACSVGT 61
            +RVTD DL ALVSD+V   E +W+L DLQ+TCGT+G STA+VKL+  +G  H+ACSVG 
Sbjct: 405 KKRVTDVDLKALVSDQVCHVEPIWKLDDLQVTCGTMGSSTASVKLVTVHGSTHVACSVGV 464

Query: 62  GPVDAAYKAVDLIVKEPVELLEYSMTAVTGGIDAIATTRVLICGDNHK--IDAITGEPSR 119
           GPVDAAYKA+DLIVKE V++LEY++  VT G DAIATTR++I  +N+K    A+ G    
Sbjct: 465 GPVDAAYKAIDLIVKETVKVLEYTLNPVTEGTDAIATTRIVIRRENNKTLTHALNGNFVY 524

Query: 120 RTFSGSGAGMDIVVSSVKAYIGALNKML 147
            TFSG+G G+D+VVSSV+AY+ ALNKML
Sbjct: 525 PTFSGTGEGVDVVVSSVEAYLTALNKML 552


>Glyma03g00800.1 
          Length = 510

 Score =  177 bits (448), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 90/148 (60%), Positives = 114/148 (77%), Gaps = 2/148 (1%)

Query: 2   SQRVTDADLLALVSDEVFQPEIVWQLGDLQITCGTLGLSTATVKLIDANGEQHIACSVGT 61
            +RVTD DL ALVSD+    E +W+LG LQ+TCGT+G STAT+KL+ ++G  H+ACSVG 
Sbjct: 359 KKRVTDVDLKALVSDQASHAEPIWKLGGLQVTCGTMGSSTATIKLVTSDGSTHVACSVGV 418

Query: 62  GPVDAAYKAVDLIVKEPVELLEYSMTAVTGGIDAIATTRVLICGDNHK--IDAITGEPSR 119
           GPVD+AYKA++LIVKE V++LEYS + VTGG DAIATTRV+I  +N +    A+ G    
Sbjct: 419 GPVDSAYKAINLIVKETVKVLEYSPSTVTGGTDAIATTRVVIRRENKQSPTPALNGNVIY 478

Query: 120 RTFSGSGAGMDIVVSSVKAYIGALNKML 147
            TFSG+G G+DIV SSV+AYI ALNKML
Sbjct: 479 PTFSGTGEGVDIVTSSVEAYITALNKML 506


>Glyma10g44180.3 
          Length = 581

 Score =  174 bits (441), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 89/124 (71%), Positives = 102/124 (82%), Gaps = 4/124 (3%)

Query: 3   QRVTDADLLALVSDEVFQPEIVWQLGDLQITCGTLGLSTATVKLIDANGEQHIACSVGTG 62
           +RVTDADL ALVSDEVFQ E VW+LGDLQ+TCGTLGLSTATVKL+ ++G  H+ACS+GTG
Sbjct: 453 KRVTDADLRALVSDEVFQAEPVWKLGDLQVTCGTLGLSTATVKLLSSDGSTHVACSIGTG 512

Query: 63  PVDAAYKAVDLIVKEPVELLEYSMTAVTGGIDAIATTRVLICGDNH----KIDAITGEPS 118
           PVD+AYKAVDLIVKE V LLEYSM AVT GIDAIATTRV+I G++        A+TGE  
Sbjct: 513 PVDSAYKAVDLIVKEQVTLLEYSMNAVTEGIDAIATTRVVIRGESETSTITTHALTGETV 572

Query: 119 RRTF 122
            RTF
Sbjct: 573 IRTF 576


>Glyma13g12520.1 
          Length = 155

 Score =  170 bits (430), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 83/145 (57%), Positives = 109/145 (75%), Gaps = 2/145 (1%)

Query: 5   VTDADLLALVSDEVFQPEIVWQLGDLQITCGTLGLSTATVKLIDANGEQHIACSVGTGPV 64
           VTD DL ALVS + F  E +W+LGDLQ+TCGT+GLSTATVKL++ +G  H+ACS+G G V
Sbjct: 2   VTDVDLKALVSYKAFHAESIWKLGDLQVTCGTIGLSTATVKLVNIDGSTHVACSIGIGAV 61

Query: 65  DAAYKAVDLIVKEPVELLEYSMTAVTGGIDAIATTRVLICGDNHKID--AITGEPSRRTF 122
           D+ YKA++LIVKEP +LL+YS+ +VT GI    T RV+IC +N+     A T + +  TF
Sbjct: 62  DSTYKAINLIVKEPTKLLDYSLNSVTEGIGVNVTARVVICRENNHTSTYAFTEDANYPTF 121

Query: 123 SGSGAGMDIVVSSVKAYIGALNKML 147
           SG  A MD+VVS+VKAY+ ALNK+L
Sbjct: 122 SGIAAEMDVVVSTVKAYLVALNKLL 146


>Glyma19g29880.1 
          Length = 555

 Score =  169 bits (429), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 86/147 (58%), Positives = 114/147 (77%), Gaps = 2/147 (1%)

Query: 3   QRVTDADLLALVSDEVFQPEIVWQLGDLQITCGTLGLSTATVKLIDANGEQHIACSVGTG 62
           +RVTD DL ALVS++V   E +W+L  LQ+TCGT+G STAT+KL+ ++G  H+ACSVG G
Sbjct: 405 KRVTDVDLKALVSNQVSHDEPIWKLDGLQVTCGTMGSSTATIKLVTSDGITHVACSVGVG 464

Query: 63  PVDAAYKAVDLIVKEPVELLEYSMTAVTGGIDAIATTRVLICGDNHK--IDAITGEPSRR 120
           PVD+AYKA++LIVKE V++LEYS++ VT G DAIATTRV+I  +N +    A+ G     
Sbjct: 465 PVDSAYKAINLIVKETVKVLEYSLSTVTEGTDAIATTRVVIRRENKQSPTPALNGNVIYP 524

Query: 121 TFSGSGAGMDIVVSSVKAYIGALNKML 147
           TFSG+G G+D+V SSV+AY+ ALNKML
Sbjct: 525 TFSGTGEGVDVVTSSVEAYLTALNKML 551


>Glyma11g17780.1 
          Length = 161

 Score =  161 bits (407), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 79/145 (54%), Positives = 106/145 (73%), Gaps = 2/145 (1%)

Query: 5   VTDADLLALVSDEVFQPEIVWQLGDLQITCGTLGLSTATVKLIDANGEQHIACSVGTGPV 64
           VTD DL ALVS +    E +W+LG LQ+TCGT+GLSTATVKL++ +G  H+ACS+G G V
Sbjct: 8   VTDVDLKALVSHKACHAESIWKLGGLQVTCGTIGLSTATVKLVNIDGSTHVACSIGIGAV 67

Query: 65  DAAYKAVDLIVKEPVELLEYSMTAVTGGIDAIATTRVLICGDNHKID--AITGEPSRRTF 122
           D+ YKA++L+VKEP +LL+YS+ +VT GI    T RV+IC +N+     A T + +  TF
Sbjct: 68  DSTYKAINLVVKEPTKLLDYSLNSVTEGIGVNVTARVVICRENNHTSTYAFTEDANYPTF 127

Query: 123 SGSGAGMDIVVSSVKAYIGALNKML 147
           SG  A MD+VVS+ KAY+ ALNK+L
Sbjct: 128 SGIAAEMDVVVSTAKAYLVALNKLL 152


>Glyma20g38950.2 
          Length = 531

 Score =  129 bits (323), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 60/74 (81%), Positives = 68/74 (91%)

Query: 3   QRVTDADLLALVSDEVFQPEIVWQLGDLQITCGTLGLSTATVKLIDANGEQHIACSVGTG 62
           +RVTDADL ALVSDEVFQ E VW+LGDLQ+TCGTLGLSTATVKL+ ++G  H+ACSVGTG
Sbjct: 457 KRVTDADLRALVSDEVFQAEPVWKLGDLQVTCGTLGLSTATVKLLSSDGSTHVACSVGTG 516

Query: 63  PVDAAYKAVDLIVK 76
           PVD+AYKAVDLIVK
Sbjct: 517 PVDSAYKAVDLIVK 530


>Glyma10g44180.2 
          Length = 526

 Score =  128 bits (321), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 59/74 (79%), Positives = 68/74 (91%)

Query: 3   QRVTDADLLALVSDEVFQPEIVWQLGDLQITCGTLGLSTATVKLIDANGEQHIACSVGTG 62
           +RVTDADL ALVSDEVFQ E VW+LGDLQ+TCGTLGLSTATVKL+ ++G  H+ACS+GTG
Sbjct: 453 KRVTDADLRALVSDEVFQAEPVWKLGDLQVTCGTLGLSTATVKLLSSDGSTHVACSIGTG 512

Query: 63  PVDAAYKAVDLIVK 76
           PVD+AYKAVDLIVK
Sbjct: 513 PVDSAYKAVDLIVK 526