Jatropha Genome Database

JcCA0302101.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0302101.20 + phase: 0 /partial
         (246 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g22240.1                                                       435   e-122
Glyma06g39770.1                                                       435   e-122

>Glyma12g22240.1 
          Length = 793

 Score =  435 bits (1119), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 197/239 (82%), Positives = 224/239 (93%)

Query: 1   MELLRSNLSRVRIPEPTNRIYKDECCISFDTPRSEGGLYVDMNTFLAFGKDSVGWNYEKT 60
           ++LLRSNLSRVRIPEPTNRIYK ECC+SFD+PRSEGGL+VDM TFLAFGKD VGWNYEKT
Sbjct: 6   LDLLRSNLSRVRIPEPTNRIYKHECCVSFDSPRSEGGLFVDMCTFLAFGKDFVGWNYEKT 65

Query: 61  GDAVYLHIKQTRKLVPEDRPSKKPTLLAIGVEGGFDNNEPEYEEIYSIVILPDYVTFPFP 120
           G+ VYLHIKQT KLVPEDRPSKKPTLLAIGV+GGFDNNEPEYEE +S+VILP+YV+ PFP
Sbjct: 66  GNPVYLHIKQTNKLVPEDRPSKKPTLLAIGVDGGFDNNEPEYEETHSVVILPEYVSLPFP 125

Query: 121 SVDLPEKVRLAVDAILMAESAERKEQLAAWTADKKQISAYAMNLPQIDNGVIVPPSGWKC 180
           SV+LPEKVRLAVDAIL+AE AERKEQLAAWTADKK++S+YA NL QIDNGV++PPSGWKC
Sbjct: 126 SVELPEKVRLAVDAILLAEGAERKEQLAAWTADKKKVSSYATNLQQIDNGVVIPPSGWKC 185

Query: 181 AKCEKRENLWLNLSDGTILCGRRNWDGSGGNNHAIEHYKETSYPLAVKLGTITADLEAA 239
           AKC+K +NLWLNL+DG ILCGR+ W G+GGNNHA+EHY+ET +P+AVKLGTITADLEAA
Sbjct: 186 AKCDKTDNLWLNLTDGMILCGRKMWGGTGGNNHAVEHYQETGFPVAVKLGTITADLEAA 244


>Glyma06g39770.1 
          Length = 789

 Score =  435 bits (1119), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 197/239 (82%), Positives = 223/239 (93%)

Query: 1   MELLRSNLSRVRIPEPTNRIYKDECCISFDTPRSEGGLYVDMNTFLAFGKDSVGWNYEKT 60
           M+LLRS LSRVRIPEPTNRIYK ECCISFD+PRSEGGL++DM TFLAFGKD VGWNYEKT
Sbjct: 1   MDLLRSYLSRVRIPEPTNRIYKHECCISFDSPRSEGGLFIDMCTFLAFGKDFVGWNYEKT 60

Query: 61  GDAVYLHIKQTRKLVPEDRPSKKPTLLAIGVEGGFDNNEPEYEEIYSIVILPDYVTFPFP 120
           G+ VYLHIKQT+KLVPEDRPSKKPTLLAIGV+GGFDNNEPEYEE +S+VILP+YV+ PFP
Sbjct: 61  GNPVYLHIKQTKKLVPEDRPSKKPTLLAIGVDGGFDNNEPEYEETHSVVILPEYVSLPFP 120

Query: 121 SVDLPEKVRLAVDAILMAESAERKEQLAAWTADKKQISAYAMNLPQIDNGVIVPPSGWKC 180
           SV+LPEKVRLAVDAI++AE  ERKEQLAAWTADKK++S+YA NL QIDNGV++PPSGWKC
Sbjct: 121 SVELPEKVRLAVDAIVLAEGTERKEQLAAWTADKKKVSSYATNLQQIDNGVVIPPSGWKC 180

Query: 181 AKCEKRENLWLNLSDGTILCGRRNWDGSGGNNHAIEHYKETSYPLAVKLGTITADLEAA 239
           AKC+K +NLWLNL+DG ILC R+NWDG+GGNNHA EHY+ET YP+AVKLGTITADLEAA
Sbjct: 181 AKCDKADNLWLNLTDGMILCERKNWDGTGGNNHAFEHYQETGYPIAVKLGTITADLEAA 239