Jatropha Genome Database

JcCA0302081.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0302081.20 - phase: 0 
         (231 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g04830.1                                                       268   5e-72
Glyma09g36760.1                                                       255   3e-68

>Glyma14g04830.1 
          Length = 221

 Score =  268 bits (684), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 138/230 (60%), Positives = 164/230 (71%), Gaps = 10/230 (4%)

Query: 1   MVLGLRQFTDRRGDGAGEPVLDTDNGEELMHVQPGVAIVIGNRSPESHGTLYISTKKVVW 60
           MVLG+R+ +      +GEPVLD+DNGEELM VQPG+ IV+G+   +S GTLYI+ K+V+W
Sbjct: 1   MVLGVREIS-----CSGEPVLDSDNGEELMQVQPGIDIVLGDLPRQSPGTLYITNKQVIW 55

Query: 61  LSDVDRAKGYSVDFLNLSLHAVSRDPEAYSSPCIYTQIXXXXXXXXXXXXXXXXXXXXXX 120
           +SDVD+ KGY+VDFL +SLHAVSRDPEAY  PC+YTQI                      
Sbjct: 56  VSDVDKTKGYAVDFLCISLHAVSRDPEAYPLPCLYTQI-DTGEADDDHSDSESNHIQQDL 114

Query: 121 XKITEMRLVPSDPSQLDTLFQIFCECAELNPEPVDEAEEEGHNWVFSADQMVDDTAELED 180
             ITEMRL+PSDP+QLD+LF IFC+CAELNPEP DE E EGH WVFSAD+M D+ AE   
Sbjct: 115 SHITEMRLIPSDPTQLDSLFAIFCQCAELNPEPNDE-EGEGHGWVFSADEMGDEEAE--- 170

Query: 181 SECYFSQNPTSSIGHSNGDHDVARRVLELQINDQRFEDPEEMEHGSDGGH 230
            E Y   NP +SIGHSNG+HD+ R  LELQINDQRFED EEME   DG H
Sbjct: 171 DEGYIFHNPANSIGHSNGNHDLTRTTLELQINDQRFEDAEEMEDNGDGNH 220


>Glyma09g36760.1 
          Length = 221

 Score =  255 bits (651), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 132/228 (57%), Positives = 161/228 (70%), Gaps = 10/228 (4%)

Query: 1   MVLGLRQFTDRRGDGAGEPVLDTDNGEELMHVQPGVAIVIGNRSPESHGTLYISTKKVVW 60
           MV G+R+ +      +GEPVLD+D+GEELM VQ G+ IV+G+   +S GTLYI+ K+V+W
Sbjct: 1   MVSGVREIS-----CSGEPVLDSDSGEELMQVQAGIDIVLGDLPRQSPGTLYITNKQVIW 55

Query: 61  LSDVDRAKGYSVDFLNLSLHAVSRDPEAYSSPCIYTQIXXXXXXXXXXXXXXXXXXXXXX 120
           LSD+D+ KGY+VDFL++SLHAVSRDPEAY  PC+YTQI                      
Sbjct: 56  LSDLDKTKGYAVDFLSISLHAVSRDPEAYPLPCLYTQI-DTGEADDDHTDSESIHIPQDL 114

Query: 121 XKITEMRLVPSDPSQLDTLFQIFCECAELNPEPVDEAEEEGHNWVFSADQMVDDTAELED 180
             I EMRL+PSDP+QLD+LF IFC+CAELNPEP D  E E H W FSADQM D+ AE   
Sbjct: 115 SNIAEMRLIPSDPTQLDSLFAIFCQCAELNPEPND-GEGEEHGWFFSADQMGDEEAE--- 170

Query: 181 SECYFSQNPTSSIGHSNGDHDVARRVLELQINDQRFEDPEEMEHGSDG 228
            E Y S +P +SIGHSNG+HD+AR +LELQINDQRFED EEME   DG
Sbjct: 171 EEGYISHHPANSIGHSNGNHDLARTILELQINDQRFEDAEEMEDNGDG 218