Jatropha Genome Database
- JcCA0301341.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0301341.20 - phase: 0 /TE/pseudo/partial
(108 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g29590.1 73 8e-14
Glyma19g25320.1 50 5e-07
Glyma07g34390.1 47 6e-06
Glyma03g02020.2 47 6e-06
Glyma01g09480.1 46 7e-06
Glyma03g02020.3 46 7e-06
Glyma03g02020.1 46 7e-06
Glyma03g02010.1 46 8e-06
Glyma03g02000.1 46 8e-06
>Glyma13g29590.1
Length = 547
Score = 72.8 bits (177), Expect = 8e-14, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 1 MAELWGLFLGLQRAWDKGVRDLLVELDNSQAVWQVNQA-IAPSPVYNLVLNIQQQLRRSW 59
+AELWG+ GL+ AWD G + + V++D+ A+ V +A P + LV I + +R+ W
Sbjct: 429 LAELWGVVHGLKLAWDLGCKKVKVDIDSGNALGLVRHGPVANDPAFALVSEINELVRKEW 488
Query: 60 EVRLSHIYREANSCTDWLAHYGST 83
V SH++RE+N D LAH G +
Sbjct: 489 LVEFSHVFRESNRAADKLAHLGHS 512
>Glyma19g25320.1
Length = 121
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 1 MAELWGLFLGLQRAWDKGVRDLLVELDNSQAVWQVNQAIAPSPV-YNLVLNIQQQLRRSW 59
+AELWG+F GL+ A KG +L+++D+ + + S + L+ IQ+ +R
Sbjct: 31 VAELWGVFQGLKLAILKGFTRILLQVDSKAVILAIRSGNEGSASGWRLIQAIQKFIRMVN 90
Query: 60 EVRLSHIYREANSCTDWLAHYGSTM 84
+ +++H+Y+E N C D LA++ ++
Sbjct: 91 QFQINHMYKETNRCVDKLANHDCSL 115
>Glyma07g34390.1
Length = 139
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 1 MAELWGLFLGLQRAWDKGVRDLLVELDNSQAVWQVN--QAIAPSPVYNLVLNIQQQLRRS 58
M+E+ L AWD+G R +L E+DN V +N + L+L +++++R
Sbjct: 42 MSEILAWNHDLNLAWDRGFRKVLCEMDNLNLVHILNSKEGFETHLHVTLLLEAREKIQRD 101
Query: 59 WEVRLSHIYREANSCTDWLAHYG 81
W++ ++H+ +EAN +LA G
Sbjct: 102 WKIEVNHVDKEANGVAHFLAGRG 124
>Glyma03g02020.2
Length = 242
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 2 AELWGLFLGLQRAWDKGVRDLLVELDNSQAVWQVNQAIAPSPVYNLVLNIQQQLRRSWEV 61
AELW + +G+Q +G R+L+VE D+ +A+ +N L +IQ R +
Sbjct: 133 AELWAIKIGMQTVVARGYRNLIVESDSLKAIQIINAHKGDF----LRSSIQHMTRMVDRI 188
Query: 62 RLSHIYREANSCTDWLAHYGSTMI*LWEITVLSLIP 97
+H+YRE NS D A +G ++ I V P
Sbjct: 189 CWNHVYRETNSVADGFAKHGLSLSQDQSIRVFDSAP 224
>Glyma01g09480.1
Length = 188
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 12 QRAWDKGVRDLLVELDNSQAVWQV-NQAIAPSPVYNLVLNIQQQLRRSWEVRLSHIYREA 70
++AW+ G R + E D+ A+ + + A P L+ I+ + + W V H RE
Sbjct: 90 RKAWNDGFRFVQCESDSQLALNLILHNGNASHPYNALISLIRNCINQPWNVTFMHTLREG 149
Query: 71 NSCTDWLAHYGST 83
N+C DWLA +G+T
Sbjct: 150 NACADWLAKHGAT 162
>Glyma03g02020.3
Length = 250
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 2 AELWGLFLGLQRAWDKGVRDLLVELDNSQAVWQVNQAIAPSPVYNLVLNIQQQLRRSWEV 61
AELW + +G+Q +G R+L+VE D+ +A+ +N L +IQ R +
Sbjct: 141 AELWAIKIGMQTVVARGYRNLIVESDSLKAIQIINAHKGDF----LRSSIQHMTRMVDRI 196
Query: 62 RLSHIYREANSCTDWLAHYGSTMI*LWEITVLSLIP 97
+H+YRE NS D A +G ++ I V P
Sbjct: 197 CWNHVYRETNSVADGFAKHGLSLSQDQSIRVFDSAP 232
>Glyma03g02020.1
Length = 254
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 2 AELWGLFLGLQRAWDKGVRDLLVELDNSQAVWQVNQAIAPSPVYNLVLNIQQQLRRSWEV 61
AELW + +G+Q +G R+L+VE D+ +A+ +N L +IQ R +
Sbjct: 145 AELWAIKIGMQTVVARGYRNLIVESDSLKAIQIINAHKGDF----LRSSIQHMTRMVDRI 200
Query: 62 RLSHIYREANSCTDWLAHYGSTMI*LWEITVLSLIP 97
+H+YRE NS D A +G ++ I V P
Sbjct: 201 CWNHVYRETNSVADGFAKHGLSLSQDQSIRVFDSAP 236
>Glyma03g02010.1
Length = 281
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 2 AELWGLFLGLQRAWDKGVRDLLVELDNSQAVWQVNQAIAPSPVYNLVLNIQQQLRRSWEV 61
AELW + +G+Q +G R+L+VE D+ +A+ +N L +IQ R +
Sbjct: 172 AELWAIKIGMQTVVARGYRNLIVESDSLKAIQIINAHKGDF----LRSSIQHMTRMVDRI 227
Query: 62 RLSHIYREANSCTDWLAHYGSTMI*LWEITVLSLIP 97
+H+YRE NS D A +G ++ I V P
Sbjct: 228 CWNHVYRETNSVADGFAKHGLSLSQDQSIRVFDSAP 263
>Glyma03g02000.1
Length = 281
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 2 AELWGLFLGLQRAWDKGVRDLLVELDNSQAVWQVNQAIAPSPVYNLVLNIQQQLRRSWEV 61
AELW + +G+Q +G R+L+VE D+ +A+ +N L +IQ R +
Sbjct: 172 AELWAIKIGMQTVVARGYRNLIVESDSLKAIQIINAHKGDF----LRSSIQHMTRMVDRI 227
Query: 62 RLSHIYREANSCTDWLAHYGSTMI*LWEITVLSLIP 97
+H+YRE NS D A +G ++ I V P
Sbjct: 228 CWNHVYRETNSVADGFAKHGLSLSQDQSIRVFDSAP 263