Jatropha Genome Database

JcCA0299871.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0299871.10 - phase: 0 /partial
         (278 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g35850.1                                                       396   e-110
Glyma12g01500.1                                                       393   e-109
Glyma12g01500.2                                                       285   3e-77
Glyma03g28770.1                                                        82   6e-16
Glyma11g10820.1                                                        70   2e-12

>Glyma09g35850.1 
          Length = 554

 Score =  396 bits (1018), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 196/281 (69%), Positives = 225/281 (80%), Gaps = 5/281 (1%)

Query: 1   GSANVGKSAFINASLKMMAQRDPXXXXXRKYKPVQSAVPGTTLGPIQIDAFLGGGKIFDT 60
           GSANVGKSAFINA LK MA  DP     ++YKP+QSAVPGTTLGPIQI+AFLGGGK++DT
Sbjct: 276 GSANVGKSAFINALLKTMAINDPVAASAQRYKPIQSAVPGTTLGPIQINAFLGGGKLYDT 335

Query: 61  PGVHLHHRQAAVVHSEDLPILAPRSRLRGQSFPNAKLASEN---GVANKFESNGLNGFSI 117
           PGVHL HRQ AVVHSEDLPILAP+SRLRG +FP++ ++S+N   G +     NGLN FSI
Sbjct: 336 PGVHLFHRQTAVVHSEDLPILAPQSRLRGLAFPSSIVSSDNVEEGASTIV--NGLNEFSI 393

Query: 118 FWGGLVRIDILKVLPETSLTFYGPKALQIHIVPTDQADEFYLEELGVLLTPPTGKERAED 177
           FWGGLVRID+LKVLPET LTFYGPK + IH+VPT+QA EFY  ELG LLTPP+G E AE+
Sbjct: 394 FWGGLVRIDVLKVLPETCLTFYGPKRIPIHMVPTEQAVEFYQTELGFLLTPPSGGENAEN 453

Query: 178 WKGLEIVRQLQIKFEDAERPASDIAISGLGWIAIEPASKSLRRPDMNLGEIAKELHLAVH 237
           WKGLE  R+LQIKFE  +RPA DIAISGLGW  +EP S+S +       E A EL LAVH
Sbjct: 454 WKGLESERKLQIKFEVVDRPACDIAISGLGWFTVEPVSRSHKISQPKPVETAGELILAVH 513

Query: 238 VPKPVEIFVRPPLPVGKYGAEWYQYRELTEKEEELRPRWNF 278
           VPK VEIFVRPP+PV K GAEWYQY ELTEK+EE+RP+W F
Sbjct: 514 VPKAVEIFVRPPIPVSKAGAEWYQYVELTEKQEEMRPKWYF 554


>Glyma12g01500.1 
          Length = 549

 Score =  393 bits (1009), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/282 (69%), Positives = 222/282 (78%), Gaps = 13/282 (4%)

Query: 1   GSANVGKSAFINASLKMMAQRDPXXXXXRKYKPVQSAVPGTTLGPIQIDAFLGGGKIFDT 60
           GSANVGKSAFINA LK MA  DP     ++YKP+QSAVPGTTLGPIQI+AFLGGGK++DT
Sbjct: 277 GSANVGKSAFINALLKTMAINDPVAASAQRYKPIQSAVPGTTLGPIQINAFLGGGKLYDT 336

Query: 61  PGVHLHHRQAAVVHSEDLPILAPRSRLRGQSFPNAKLASENGVANKFESNGLNGFSIFWG 120
           PGVHL+HRQ AVVHSEDLPILAP+SRLRG SFP        G +     NGLN FSIFWG
Sbjct: 337 PGVHLYHRQTAVVHSEDLPILAPQSRLRGLSFP-------EGASTIV--NGLNAFSIFWG 387

Query: 121 GLVRIDILKVLPETSLTFYGPKALQIHIVPTDQADEFYLEELGVLLTPPTGKERAEDWKG 180
           GLVRID+LKVLPET LTFYGPK + IH+VPT+QA EFY  ELGVLLTPP+G E AE+WKG
Sbjct: 388 GLVRIDVLKVLPETCLTFYGPKRIPIHMVPTEQAVEFYQTELGVLLTPPSGGENAENWKG 447

Query: 181 LEIVRQLQIKFEDAE----RPASDIAISGLGWIAIEPASKSLRRPDMNLGEIAKELHLAV 236
           LE  R+LQIKFED +    +PA DIAISGLGW  +EP S+SL+       E A EL LAV
Sbjct: 448 LESERKLQIKFEDVDSYDPKPACDIAISGLGWFTVEPVSRSLKISQPKPVETAGELILAV 507

Query: 237 HVPKPVEIFVRPPLPVGKYGAEWYQYRELTEKEEELRPRWNF 278
           HVPK VEIFVR P+PVGK GAEWYQY ELTEK+EE+RP+W F
Sbjct: 508 HVPKAVEIFVRSPIPVGKAGAEWYQYVELTEKQEEMRPKWYF 549


>Glyma12g01500.2 
          Length = 471

 Score =  285 bits (730), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 141/195 (72%), Positives = 158/195 (81%), Gaps = 9/195 (4%)

Query: 1   GSANVGKSAFINASLKMMAQRDPXXXXXRKYKPVQSAVPGTTLGPIQIDAFLGGGKIFDT 60
           GSANVGKSAFINA LK MA  DP     ++YKP+QSAVPGTTLGPIQI+AFLGGGK++DT
Sbjct: 277 GSANVGKSAFINALLKTMAINDPVAASAQRYKPIQSAVPGTTLGPIQINAFLGGGKLYDT 336

Query: 61  PGVHLHHRQAAVVHSEDLPILAPRSRLRGQSFPNAKLASENGVANKFESNGLNGFSIFWG 120
           PGVHL+HRQ AVVHSEDLPILAP+SRLRG SFP        G +     NGLN FSIFWG
Sbjct: 337 PGVHLYHRQTAVVHSEDLPILAPQSRLRGLSFP-------EGASTIV--NGLNAFSIFWG 387

Query: 121 GLVRIDILKVLPETSLTFYGPKALQIHIVPTDQADEFYLEELGVLLTPPTGKERAEDWKG 180
           GLVRID+LKVLPET LTFYGPK + IH+VPT+QA EFY  ELGVLLTPP+G E AE+WKG
Sbjct: 388 GLVRIDVLKVLPETCLTFYGPKRIPIHMVPTEQAVEFYQTELGVLLTPPSGGENAENWKG 447

Query: 181 LEIVRQLQIKFEDAE 195
           LE  R+LQIKFED +
Sbjct: 448 LESERKLQIKFEDVD 462


>Glyma03g28770.1 
          Length = 616

 Score = 82.0 bits (201), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 25/213 (11%)

Query: 1   GSANVGKSAFINASLKMMAQRDPXXXXXRKYKPVQSAVPGTTLGPIQIDAFL-GGGKIFD 59
           G+ N GKS  INA  K            +  K  ++ +PGTTLG ++I   L    K+FD
Sbjct: 349 GAQNAGKSTLINAFAKKQG--------AKVTKLTEAPIPGTTLGILRIAGVLPAKTKMFD 400

Query: 60  TPGVHLHHRQAAVVHSEDLPILAPRSRLRGQSFPNAKLASENGVANKFESNGLNGFSIFW 119
           TPG+   +  +  ++ ++  ++  R  LR +++             + ++N + G +I  
Sbjct: 401 TPGLLHPYLMSMRLNRDEQKMVEIRKELRPRTY-------------RIKANSV-GQAIHI 446

Query: 120 GGLVRIDILKVLPET-SLTFYGPKALQIHIVPTDQADEFYLEELGVLLTPPTGKERAEDW 178
           GGL R+D+++   ET   T +    + +H+   + ADE +   +G+ L PPTG +RA + 
Sbjct: 447 GGLTRLDLVEASVETIYATVWASLNVSLHMGKIENADEVWRNHVGIRLQPPTGNDRAAEL 506

Query: 179 KGLEIVRQLQIKFEDAERPASDIAISGLGWIAI 211
            G    R++++     +    DIAI+GLGW ++
Sbjct: 507 -GTWQEREVKVSGTSWDVNTIDIAIAGLGWFSL 538


>Glyma11g10820.1 
          Length = 592

 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 28/213 (13%)

Query: 1   GSANVGKSAFINASLKMMAQRDPXXXXXRKYKPVQSAVPGTTLGPIQIDA-FLGGGKIFD 59
           G+ N GKS  IN+  K    +             ++ VPGTTLG ++++  F    K+FD
Sbjct: 322 GAQNAGKSTLINSIGKYAGGKITHL--------TEAPVPGTTLGIVRVEGVFSSQAKLFD 373

Query: 60  TPGVHLHHRQAAVVHSEDLPILAPRSRLRGQSFPNAKLASENGVANKFESNGLNGFSIFW 119
           TPG+   ++    +  E+  ++     L+ +++   ++ +              G SI  
Sbjct: 374 TPGLLHPYQITTRLMREEQKLVHVGKELKPRTY---RIKA--------------GHSIHI 416

Query: 120 GGLVRIDILKV-LPETSLTFYGPKALQIHIVPTDQADEFYLEELGVLLTPPTGKERAEDW 178
            GLVR+DI +  L    +T +    L +H+   + A + + +  G  L PP G++R ++ 
Sbjct: 417 AGLVRLDIEETPLDSIYVTVWASPYLPLHMGKIENACKMFQDHFGCQLQPPIGEKRVQEL 476

Query: 179 KGLEIVRQLQIKFEDAERPASDIAISGLGWIAI 211
            G  + R+  +     E  + DIA++GLGW A 
Sbjct: 477 -GNWVRREFHVSGNSWESSSVDIAVAGLGWFAF 508