Jatropha Genome Database

JcCA0299751.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0299751.20 + phase: 0 /partial
         (244 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g33130.1                                                       264   7e-71
Glyma16g22500.1                                                       254   8e-68
Glyma10g00580.1                                                       169   2e-42
Glyma14g37190.1                                                        92   4e-19
Glyma02g39110.1                                                        91   1e-18
Glyma14g37210.1                                                        87   2e-17

>Glyma09g33130.1 
          Length = 362

 Score =  264 bits (674), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 130/219 (59%), Positives = 167/219 (76%), Gaps = 4/219 (1%)

Query: 20  LGGL---LRICLFRILSMGPIPSHFAFIMDGNRRYAKKGNLKLGAGHRAGFESLISILKY 76
           LGGL   LR C+F ILS+GP+PSH AFIMDGNRRYAKK N++ G GH+AGF +L+SIL+Y
Sbjct: 13  LGGLYYYLRRCMFAILSVGPVPSHIAFIMDGNRRYAKKRNMEEGDGHKAGFTALMSILRY 72

Query: 77  CYELGVKYVTIYAFSIDNFKRRPDEVKDLMDLMLEKIDELLKEESMAKQYGIRVYFIGNL 136
           CYELGVKYVT+YAFSIDNFKR+P+EV+ LM+LM EKI+ELL +ES+  +YG+R++FIG+L
Sbjct: 73  CYELGVKYVTVYAFSIDNFKRKPNEVQSLMELMREKIEELLLQESLINEYGVRLHFIGDL 132

Query: 137 KLLSENVRIAAEKVMRATANNTKCTLLICLAYTSRDEILHAVQDSCKNKWEEIQPLSFWK 196
           +LL+E VR + EK MR TA+N +  LLIC+AYTSR EI+HAVQ+ CK KW E+Q     K
Sbjct: 133 QLLTEPVRASVEKAMRVTAHNNQRVLLICVAYTSRHEIVHAVQECCKEKWNEVQASKEAK 192

Query: 197 ATNGGIQEIDDCKKMNGVTPHGFQEFQKDEVDESQATAA 235
            TNG    ID   K NG     FQ+  KD  + ++A ++
Sbjct: 193 LTNGAFARIDQGLKGNGFDLL-FQDSSKDYQNVTKACSS 230


>Glyma16g22500.1 
          Length = 304

 Score =  254 bits (648), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 119/205 (58%), Positives = 157/205 (76%), Gaps = 2/205 (0%)

Query: 13  VSELFGNLGGLLRICLFRILSMGPIPSHFAFIMDGNRRYAKKGNLKLGAGHRAGFESLIS 72
           +    G L   LR C+F ILS+GP+PSH AFIMDGNRRYAKK N++ G GH+AGF +L+S
Sbjct: 9   IGHFLGGLYCYLRRCMFAILSVGPVPSHIAFIMDGNRRYAKKRNMEEGDGHKAGFTALMS 68

Query: 73  ILKYCYELGVKYVTIYAFSIDNFKRRPDEVKDLMDLMLEKIDELLKEESMAKQYGIRVYF 132
           IL+YCYELGVKYVT+YAFSIDNFKR+P+EV+ LM+LM EKI+ELL++ES+  +YG+R++F
Sbjct: 69  ILRYCYELGVKYVTVYAFSIDNFKRKPNEVQSLMELMREKIEELLQQESLINEYGVRLHF 128

Query: 133 IGNLKLLSENVRIAAEKVMRATANNTKCTLLICLAYTSRDEILHAVQDSCKNKWEEIQPL 192
           IG+L+LL+E V  + EK MR TA+N +  LL+C+AYTSR E++HAVQ+ CK KW E+Q  
Sbjct: 129 IGDLQLLTEPVIASVEKAMRVTAHNNQRVLLVCIAYTSRHEMVHAVQECCKEKWNEVQAS 188

Query: 193 SFWKATNGGIQ--EIDDCKKMNGVT 215
              K TNG     EI  C ++  +T
Sbjct: 189 KEAKLTNGNDSEAEITSCNELVEMT 213


>Glyma10g00580.1 
          Length = 224

 Score =  169 bits (429), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/196 (47%), Positives = 129/196 (65%), Gaps = 25/196 (12%)

Query: 45  MDGNRRYAKKGNLKLGAGHRAGFESLISILKYCYELGVKYVTIYAFSIDNFKRRPDEVKD 104
           MDGNRRYAKK N++ G GH+AGF +L+SIL+YCYELGVK              RP EV+ 
Sbjct: 1   MDGNRRYAKKRNMEEGDGHKAGFTALMSILRYCYELGVK--------------RPKEVQS 46

Query: 105 LMDLMLEKIDELLKEESMAKQYGIRVYFIGNLKLLSENVRIAAEKVMRATANNTKCTLLI 164
           LM+LM EKI+ELLK+ES+  +YG+R++FIG+++LL+E VR+A EK MR TA+N +  LLI
Sbjct: 47  LMELMREKIEELLKQESLINEYGVRLHFIGDMQLLTEPVRVALEKAMRVTAHNNQRVLLI 106

Query: 165 CLAYTSRDEILHAVQD--SCKNKWEEIQPLSFWKATNGGIQEIDDCKKMNGVTPHGFQEF 222
           C+AYTSR EI+HAVQ+  SCK+       L+  KA +     ++   + +G+  H     
Sbjct: 107 CVAYTSRHEIVHAVQEFYSCKDY------LNATKACSSVPNRVEGAGEKDGMLEHT---V 157

Query: 223 QKDEVDESQATAASAN 238
           +K   + S+A   S N
Sbjct: 158 EKHSGNNSEAEITSCN 173


>Glyma14g37190.1 
          Length = 322

 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 80/147 (54%), Gaps = 3/147 (2%)

Query: 37  IPSHFAFIMDGNRRYAKKGNLKLGAGHRAGFESLISILKYCYELGVKYVTIYAFSIDNFK 96
           +P H A IMDGN R+AK   L   AGH+AG +SL  +++ C   G+K +T++AFS DN+ 
Sbjct: 89  MPKHVAVIMDGNGRWAKVKGLPPSAGHQAGVQSLRKMVRLCCSWGIKVLTVFAFSTDNWV 148

Query: 97  RRPDEVKDLMDLMLEKIDELLKEESMAKQYGIRVYFIGNLKLLSENVRIAAEKVMRATAN 156
           R   EV  LM L    I+    E    K+ GIR+  IG+   L E+++         T  
Sbjct: 149 RPKVEVDFLMRLFERTIN---SEVQTFKREGIRISVIGDSSRLPESLKRMIASAEEDTKQ 205

Query: 157 NTKCTLLICLAYTSRDEILHAVQDSCK 183
           N++  L++ + Y+ + +++ A +   K
Sbjct: 206 NSRFQLIVAVGYSGKYDVVQACKSVAK 232


>Glyma02g39110.1 
          Length = 250

 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 82/147 (55%), Gaps = 3/147 (2%)

Query: 37  IPSHFAFIMDGNRRYAKKGNLKLGAGHRAGFESLISILKYCYELGVKYVTIYAFSIDNFK 96
           +P H A IMDGN R+AK   L   AGH+AG +SL  +++ C   G+K +T++AFS DN+ 
Sbjct: 20  MPKHVAVIMDGNGRWAKVKGLPPSAGHQAGVQSLRRMVRLCSSWGIKVLTVFAFSTDNWV 79

Query: 97  RRPDEVKDLMDLMLEKIDELLKEESMAKQYGIRVYFIGNLKLLSENVRIAAEKVMRATAN 156
           R   E   LM L    I+    E    K+ GI++  IG+   L E+++     V   T +
Sbjct: 80  RPKLEFDFLMRLFETTIN---SEVQAFKREGIQISVIGDSSKLPESLKRMIVSVEEDTKH 136

Query: 157 NTKCTLLICLAYTSRDEILHAVQDSCK 183
           N++  L++ L+Y+ + +++ A +   K
Sbjct: 137 NSRLQLIVALSYSGKYDVVQACKSVAK 163


>Glyma14g37210.1 
          Length = 307

 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 82/147 (55%), Gaps = 3/147 (2%)

Query: 37  IPSHFAFIMDGNRRYAKKGNLKLGAGHRAGFESLISILKYCYELGVKYVTIYAFSIDNFK 96
           +P H A I+DG+ R+AK   L   AGH+AG + L ++++ C   G++ +T++  S +N+ 
Sbjct: 73  MPKHVAVIIDGHGRWAKLRGLPASAGHQAGVQPLRTVVRLCCSWGIQVLTVFVLSTENWF 132

Query: 97  RRPDEVKDLMDLMLEKIDELLKEESMAKQYGIRVYFIGNLKLLSENVRIAAEKVMRATAN 156
           R   EV  LM L    I+  +   +  K+ GI++Y IG+   L E++R       ++T +
Sbjct: 133 RPKVEVDSLMKLFETTINSSI---ACMKKEGIQIYVIGDSSKLPESLRSTIANAEKSTKH 189

Query: 157 NTKCTLLICLAYTSRDEILHAVQDSCK 183
           N++  L++ + Y  + +++ A +   K
Sbjct: 190 NSRLQLIVAMNYGGKYDVVQACKSVAK 216