Jatropha Genome Database

JcCA0299231.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0299231.10 - phase: 0 /partial
         (565 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g36570.1                                                       804   0.0  

>Glyma03g36570.1 
          Length = 1126

 Score =  804 bits (2077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/552 (71%), Positives = 461/552 (83%), Gaps = 2/552 (0%)

Query: 1    DWKCIISILLDENPQVELTDDDATNLVRLLFASVRKAVGERIVPASDNRKQYYNKAQKEI 60
            DWKCIIS+LLDE+P VEL+D DATNLVRLL ASV+KA+GERIVPA+DNRK YYNKAQKE+
Sbjct: 481  DWKCIISMLLDESPSVELSDSDATNLVRLLCASVKKAIGERIVPATDNRKHYYNKAQKEV 540

Query: 61   FENNRRDITIAMMKNFPLLLRKFTADKAKVPSLVEIIVHMNLELYSLKRQEQNFKNVLQL 120
            FE+N++DIT+AMMK +PLLLRKF +DKAKV SLVEI++HMNLE YSLKRQEQNFKN+LQL
Sbjct: 541  FESNKQDITVAMMKTYPLLLRKFISDKAKVSSLVEIVLHMNLEYYSLKRQEQNFKNLLQL 600

Query: 121  IKEAFFKHGEKEALRSCVKAITFCSTESQGELKDFACNKLKNLEDELIAKLKSALKEAAD 180
            +KEAFFKHG+K+ LR+CVKAI FC  ESQGEL+DFA NKLK LEDE+IAKLKSA+KE  D
Sbjct: 601  VKEAFFKHGDKDPLRACVKAIDFCCIESQGELQDFARNKLKELEDEIIAKLKSAIKEVLD 660

Query: 181  G-DEYSLLVNLKRLYELQLSRAVPIESLYDDIVRILHYFRNVDDEVVSFLLLNMYLHVAW 239
            G DEYSLLVNLKRLYELQL R+VPI SLY+DIV +L   R+++DEVV FLLLNMYLH+AW
Sbjct: 661  GGDEYSLLVNLKRLYELQLKRSVPINSLYEDIVTVLRGNRDMEDEVVGFLLLNMYLHLAW 720

Query: 240  SLQSIVNSETVSEAQLSSLLSKRNVLFEELEYFLITPSNEERVSKYANQLACRVCIILAE 299
             LQSIVN E VSEA L+SLLSKR+ L +ELEYFL    +     KY ++L CRVC ILAE
Sbjct: 721  GLQSIVNEEAVSEASLNSLLSKRDTLLQELEYFLNLADDNREGGKYTSELGCRVCTILAE 780

Query: 300  AWCLFRQTNFSSTKLESLGYCPDTSVLQKFWRLSEQQLNISDETEDEDSNKEYIEETNRD 359
             W LFR TNF+ TKLE LGY PDT +LQKFW L +QQLNISDE EDED NKEY  ETNRD
Sbjct: 781  TWFLFRTTNFNKTKLEKLGYQPDTDMLQKFWELCQQQLNISDEAEDEDVNKEYAVETNRD 840

Query: 360  AVVIAAAKLVASGTVSKEYLAPEIISHFVMHGTSIAEIVKHLITVIKKKDDDTTNIFLEA 419
            AV+IAAAKL+A+  V KE LA EIISHFVMHGTS+AEI+KHLITV+KKKD D  +IFLEA
Sbjct: 841  AVMIAAAKLIANDVVPKEDLASEIISHFVMHGTSVAEIIKHLITVLKKKDVDLASIFLEA 900

Query: 420  LKRAHHRHLEELSRSDDGSVGKSFQE-CKDLAARLSATFMGAARNKHRADILKIVKEGIE 478
            LK+A+HRHL  +S S++ S   +    CKDLAA+LS TF+G AR KHR DILK+V++GIE
Sbjct: 901  LKKAYHRHLVNMSGSENVSSENNSSSGCKDLAAKLSGTFIGVARIKHRPDILKVVRDGIE 960

Query: 479  YAFIDSPKQLSFLEGAVLHFVSKLPTSDVLEILKDVQSRTENVNTDEDPSGWRPYHTFVD 538
            YAF+D+PKQLSFLE AVLHFVSKL   D+ +I KDVQ RT NVNTDE+PSGWRPY  F+ 
Sbjct: 961  YAFVDAPKQLSFLEEAVLHFVSKLTAPDLSDITKDVQQRTTNVNTDENPSGWRPYKVFIA 1020

Query: 539  NLREKYAKNDGF 550
            NL EK AKN+GF
Sbjct: 1021 NLLEKCAKNEGF 1032