Jatropha Genome Database

JcCA0299021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0299021.10 + phase: 0 
         (337 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma0084s00210.1                                                     315   4e-86
Glyma13g22160.1                                                       283   1e-76
Glyma04g43520.2                                                       117   2e-26
Glyma04g43520.1                                                       117   2e-26

>Glyma0084s00210.1 
          Length = 337

 Score =  315 bits (808), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 149/243 (61%), Positives = 182/243 (74%), Gaps = 9/243 (3%)

Query: 69  AIKSGQFLNILGAAPALFFRLGTGVFVNGYSASFVSKNEIPPGQYALEVAGYKVKESSKV 128
           AI+  +   + GA   L FR  TGVFV+GYS S VSK+EIP  +YALE+ G  +KE++K+
Sbjct: 74  AIRPDKTSEVFGALLPLIFRFATGVFVSGYSFSIVSKDEIPTDEYALELNGVTIKETAKL 133

Query: 129 GPRPEKPIEIYEFESFLLMFASNCKYV-QVREIVSVLDIDVLFYPCPKNGPTFRPKVVQM 187
           GPRPEKPIEIYEFES        C +  +VREIV++LD+DVLFYPCP+NGP FR KV++M
Sbjct: 134 GPRPEKPIEIYEFES--------CPFCRKVREIVAILDLDVLFYPCPRNGPNFRQKVLEM 185

Query: 188 GGKQQFPYMVDPNTGTAMYESDDIIKYLVEKYGDGTVPFMXXXXXXXXXXEGFAMIGRMG 247
           GGK QFPYMVDPNTG +MYESDDII+YLV+KYGDG VP             G  M+ R+ 
Sbjct: 186 GGKLQFPYMVDPNTGASMYESDDIIRYLVDKYGDGNVPLSLSLGFLTTLTAGLGMLSRIS 245

Query: 248 KGSSYTPSKLPPKPLEIWSYEGSPFCKIVREALVESELPHIQRSCARGSPKRQALYEKAG 307
           KG++YTP+K PPKPL++W+YEGSPFCK+VRE LVE ELPH+  SCARGSPKR  LY+K G
Sbjct: 246 KGTTYTPAKFPPKPLKLWAYEGSPFCKLVREVLVELELPHLLVSCARGSPKRHILYQKTG 305

Query: 308 HFQ 310
            FQ
Sbjct: 306 TFQ 308



 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 132 PEKPIEIYEFESFLLMFASNCKYVQVREIVSVLDIDVLFYPCPKNGPTFRPKVVQMGGKQ 191
           P KP++++ +E      +  CK V  RE++  L++  L   C +  P  R  + Q  G  
Sbjct: 256 PPKPLKLWAYEG-----SPFCKLV--REVLVELELPHLLVSCARGSPK-RHILYQKTGTF 307

Query: 192 QFPYMVDPNTGTAMYESDDIIKYLVEKYG 220
           Q P++ DPNTG  M+ES +II+YL   Y 
Sbjct: 308 QAPFLEDPNTGIEMFESAEIIEYLRATYA 336


>Glyma13g22160.1 
          Length = 288

 Score =  283 bits (725), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 133/221 (60%), Positives = 166/221 (75%), Gaps = 9/221 (4%)

Query: 69  AIKSGQFLNILGAAPALFFRLGTGVFVNGYSASFVSKNEIPPGQYALEVAGYKVKESSKV 128
           AI+  +   + GA   L FR  TGVFV+GYS S VSK+EIPP +YALE+ G  +KE++K+
Sbjct: 73  AIRPDKTSEVFGALLPLLFRFATGVFVSGYSFSIVSKDEIPPDEYALELNGVTIKETAKL 132

Query: 129 GPRPEKPIEIYEFESFLLMFASNCKYV-QVREIVSVLDIDVLFYPCPKNGPTFRPKVVQM 187
           GPRPEKPIEIYEFE+        C +  +VREIV++LD+DVLFYPCP+NGP FR KV++M
Sbjct: 133 GPRPEKPIEIYEFET--------CPFCRKVREIVAILDLDVLFYPCPRNGPNFRQKVLEM 184

Query: 188 GGKQQFPYMVDPNTGTAMYESDDIIKYLVEKYGDGTVPFMXXXXXXXXXXEGFAMIGRMG 247
           GGK QFPYMVDPNTG +MYESDDII+YLV+KYGDG VP             G  M+ R+ 
Sbjct: 185 GGKLQFPYMVDPNTGASMYESDDIIRYLVDKYGDGNVPLSLSLGFLTTLTAGLGMLSRIS 244

Query: 248 KGSSYTPSKLPPKPLEIWSYEGSPFCKIVREALVESELPHI 288
           KG++YTP+K PPKPL++W+Y GSPFCK+VRE LVE ELPH+
Sbjct: 245 KGTTYTPAKFPPKPLKLWAYGGSPFCKLVREVLVELELPHL 285


>Glyma04g43520.2 
          Length = 317

 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/181 (37%), Positives = 105/181 (58%), Gaps = 15/181 (8%)

Query: 136 IEIYEFESFLLMFASNCKYVQ-VREIVSVLDIDVLFYPCPKNGPTFRPKVVQMGGKQQFP 194
           ++++EFE+        C + + VRE ++ LD+ V  YPCPK     R  V + GGK+QFP
Sbjct: 116 LQLFEFEA--------CPFCRRVREALTELDLSVEVYPCPKGSVRHREVVRRTGGKEQFP 167

Query: 195 YMVDPNTGTAMYESDDIIKYLVEKYGDGTVPFMXXXXXXXXXXEGFA-MIGRMGKGSS-- 251
           +++D  +G  +YES DI+KYL E+YG+G  P             G+   I R G+G +  
Sbjct: 168 FIIDQKSGIFIYESGDIVKYLFERYGEGRSP--SSGLLESTIFTGWMPTILRAGRGMTRW 225

Query: 252 -YTPSKLPPKPLEIWSYEGSPFCKIVREALVESELPHIQRSCARGSPKRQALYEKAGHFQ 310
            ++    PP  LE++SYE +P  +IVREAL E ELP+I ++   GSP+ + L + +G  +
Sbjct: 226 EHSRPDPPPGKLELFSYENNPNARIVREALCELELPYILQNVGEGSPRMKLLLDASGSKE 285

Query: 311 V 311
           V
Sbjct: 286 V 286


>Glyma04g43520.1 
          Length = 317

 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/181 (37%), Positives = 105/181 (58%), Gaps = 15/181 (8%)

Query: 136 IEIYEFESFLLMFASNCKYVQ-VREIVSVLDIDVLFYPCPKNGPTFRPKVVQMGGKQQFP 194
           ++++EFE+        C + + VRE ++ LD+ V  YPCPK     R  V + GGK+QFP
Sbjct: 116 LQLFEFEA--------CPFCRRVREALTELDLSVEVYPCPKGSVRHREVVRRTGGKEQFP 167

Query: 195 YMVDPNTGTAMYESDDIIKYLVEKYGDGTVPFMXXXXXXXXXXEGFA-MIGRMGKGSS-- 251
           +++D  +G  +YES DI+KYL E+YG+G  P             G+   I R G+G +  
Sbjct: 168 FIIDQKSGIFIYESGDIVKYLFERYGEGRSP--SSGLLESTIFTGWMPTILRAGRGMTRW 225

Query: 252 -YTPSKLPPKPLEIWSYEGSPFCKIVREALVESELPHIQRSCARGSPKRQALYEKAGHFQ 310
            ++    PP  LE++SYE +P  +IVREAL E ELP+I ++   GSP+ + L + +G  +
Sbjct: 226 EHSRPDPPPGKLELFSYENNPNARIVREALCELELPYILQNVGEGSPRMKLLLDASGSKE 285

Query: 311 V 311
           V
Sbjct: 286 V 286