Jatropha Genome Database
- JcCA0298471.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0298471.10 + phase: 0
(68 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g00950.2 60 5e-10
Glyma16g24220.1 60 5e-10
Glyma06g00980.1 60 5e-10
Glyma04g00950.1 60 5e-10
Glyma02g05630.1 60 5e-10
Glyma01g37320.1 60 5e-10
Glyma14g23990.1 60 5e-10
Glyma13g03470.1 60 5e-10
Glyma12g04090.1 60 5e-10
Glyma11g11760.1 60 5e-10
Glyma12g04090.2 60 6e-10
Glyma11g07980.1 60 6e-10
>Glyma04g00950.2
Length = 138
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 16 VADAEVELDPANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 68
V DA V ANAQQPKLFVGM YGLIVGIILSSRAGQSRA+
Sbjct: 89 VGDAGVR---ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 138
>Glyma16g24220.1
Length = 164
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 16 VADAEVELDPANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 68
V DA V ANAQQPKLFVGM YGLIVGIILSSRAGQSRA+
Sbjct: 115 VGDAGVR---ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164
>Glyma06g00980.1
Length = 164
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 16 VADAEVELDPANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 68
V DA V ANAQQPKLFVGM YGLIVGIILSSRAGQSRA+
Sbjct: 115 VGDAGVR---ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164
>Glyma04g00950.1
Length = 164
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 16 VADAEVELDPANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 68
V DA V ANAQQPKLFVGM YGLIVGIILSSRAGQSRA+
Sbjct: 115 VGDAGVR---ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164
>Glyma02g05630.1
Length = 164
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 16 VADAEVELDPANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 68
V DA V ANAQQPKLFVGM YGLIVGIILSSRAGQSRA+
Sbjct: 115 VGDAGVR---ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164
>Glyma01g37320.1
Length = 164
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 16 VADAEVELDPANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 68
V DA V ANAQQPKLFVGM YGLIVGIILSSRAGQSRA+
Sbjct: 115 VGDAGVR---ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164
>Glyma14g23990.1
Length = 164
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 16 VADAEVELDPANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 68
V DA V ANAQQPKLFVGM YGLIVGIILSSRAGQSRA+
Sbjct: 115 VGDAGVR---ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164
>Glyma13g03470.1
Length = 164
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 16 VADAEVELDPANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 68
V DA V ANAQQPKLFVGM YGLIVGIILSSRAGQSRA+
Sbjct: 115 VGDAGVR---ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164
>Glyma12g04090.1
Length = 164
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 16 VADAEVELDPANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 68
V DA V ANAQQPKLFVGM YGLIVGIILSSRAGQSRA+
Sbjct: 115 VGDAGVR---ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164
>Glyma11g11760.1
Length = 164
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 16 VADAEVELDPANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 68
V DA V ANAQQPKLFVGM YGLIVGIILSSRAGQSRA+
Sbjct: 115 VGDAGVR---ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164
>Glyma12g04090.2
Length = 142
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 16 VADAEVELDPANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 68
V DA V ANAQQPKLFVGM YGLIVGIILSSRAGQSRA+
Sbjct: 93 VGDAGVR---ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 142
>Glyma11g07980.1
Length = 164
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 16 VADAEVELDPANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 68
V DA V ANAQQPKLFVGM YGLIVGIILSSRAGQSRA+
Sbjct: 115 VGDAGVR---ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164