Jatropha Genome Database
- JcCA0297261.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0297261.10 + phase: 0 /partial
(72 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g18890.1 106 6e-24
Glyma19g00440.1 100 5e-22
Glyma05g08950.1 100 7e-22
Glyma05g08950.2 99 8e-22
Glyma05g02510.1 97 3e-21
Glyma04g36030.1 61 3e-10
Glyma03g29440.1 48 3e-06
>Glyma06g18890.1
Length = 771
Score = 106 bits (264), Expect = 6e-24, Method: Composition-based stats.
Identities = 45/72 (62%), Positives = 64/72 (88%)
Query: 1 MLNSGGAIQSLDIDDDKNLVRIGVKGRGEMKVFASEKPVACKLDGVDVQFSYDDQVVVIQ 60
MLN+GGAIQS++ D+ ++V+IGV+G GEMKVFASEKPV+CKLDGV V+F Y+D+++ +Q
Sbjct: 696 MLNTGGAIQSMEFDNHIDVVKIGVRGCGEMKVFASEKPVSCKLDGVVVKFDYEDKMLRVQ 755
Query: 61 VPWPNSSRLSAI 72
VPWP++S+LS +
Sbjct: 756 VPWPSASKLSMV 767
>Glyma19g00440.1
Length = 180
Score = 99.8 bits (247), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 56/72 (77%)
Query: 1 MLNSGGAIQSLDIDDDKNLVRIGVKGRGEMKVFASEKPVACKLDGVDVQFSYDDQVVVIQ 60
MLN+GGA+QSL D+ +NLV +GV+G GEM+V+ASEKP C++DG V F Y+ +V IQ
Sbjct: 108 MLNTGGAVQSLAFDEAQNLVEVGVRGTGEMRVYASEKPTTCRIDGKQVDFEYEGSMVKIQ 167
Query: 61 VPWPNSSRLSAI 72
VPWP SS+LS +
Sbjct: 168 VPWPGSSKLSTV 179
>Glyma05g08950.1
Length = 738
Score = 99.8 bits (247), Expect = 7e-22, Method: Composition-based stats.
Identities = 41/72 (56%), Positives = 57/72 (79%)
Query: 1 MLNSGGAIQSLDIDDDKNLVRIGVKGRGEMKVFASEKPVACKLDGVDVQFSYDDQVVVIQ 60
MLN+GGA+QSL D+ +NLV +G++G GEM+V+ASEKP C++DG +V F Y+ +V IQ
Sbjct: 663 MLNTGGAVQSLAFDEGQNLVEVGLRGTGEMRVYASEKPRTCRIDGKEVDFEYEGSMVNIQ 722
Query: 61 VPWPNSSRLSAI 72
VPWP SS+LS +
Sbjct: 723 VPWPGSSKLSTV 734
>Glyma05g08950.2
Length = 324
Score = 99.4 bits (246), Expect = 8e-22, Method: Composition-based stats.
Identities = 41/72 (56%), Positives = 57/72 (79%)
Query: 1 MLNSGGAIQSLDIDDDKNLVRIGVKGRGEMKVFASEKPVACKLDGVDVQFSYDDQVVVIQ 60
MLN+GGA+QSL D+ +NLV +G++G GEM+V+ASEKP C++DG +V F Y+ +V IQ
Sbjct: 249 MLNTGGAVQSLAFDEGQNLVEVGLRGTGEMRVYASEKPRTCRIDGKEVDFEYEGSMVNIQ 308
Query: 61 VPWPNSSRLSAI 72
VPWP SS+LS +
Sbjct: 309 VPWPGSSKLSTV 320
>Glyma05g02510.1
Length = 772
Score = 97.4 bits (241), Expect = 3e-21, Method: Composition-based stats.
Identities = 44/72 (61%), Positives = 55/72 (76%)
Query: 1 MLNSGGAIQSLDIDDDKNLVRIGVKGRGEMKVFASEKPVACKLDGVDVQFSYDDQVVVIQ 60
MLNSGG+I SL+ D +NL RIGV+G GEM+VFASEKP + K+DG V+F Y D+ V +Q
Sbjct: 697 MLNSGGSIMSLEFDQQENLARIGVRGHGEMRVFASEKPESVKIDGESVEFDYVDRTVRLQ 756
Query: 61 VPWPNSSRLSAI 72
V WP SSRLS +
Sbjct: 757 VSWPCSSRLSVV 768
>Glyma04g36030.1
Length = 93
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 14/70 (20%)
Query: 1 MLNSGGAIQSLDIDDDKNLVRIGVKGRGEMKVFASEKPVACKLDGVDVQFSYDDQVVVIQ 60
MLNSGGAIQS++ D+ ++V+IG+ V +DGV V+F Y+D++ +Q
Sbjct: 37 MLNSGGAIQSMEFDNHTDVVKIGL--------------VVKYIDGVAVKFDYEDKMARVQ 82
Query: 61 VPWPNSSRLS 70
VPWP SS+LS
Sbjct: 83 VPWPCSSKLS 92
>Glyma03g29440.1
Length = 750
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 1 MLNSGGAIQSLDIDDD--KNLVRIGVKGRGEMKVFASEKPVACKLDGVDVQFSYDDQVVV 58
M N+GGA++ ++I + + + V+GRG V++S++P+ C + G + F+YD + +
Sbjct: 670 MFNTGGAVEQVEIHNRAATKTIALSVRGRGRFGVYSSQRPLKCVVGGAETDFNYDSETGL 729
Query: 59 IQVPWPNS 66
P S
Sbjct: 730 TTFSIPVS 737