Jatropha Genome Database

JcCA0296911.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0296911.10 - phase: 0 /partial
         (296 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g02690.1                                                       185   5e-47
Glyma13g05440.1                                                       185   5e-47
Glyma06g13480.1                                                        63   5e-10
Glyma04g41370.1                                                        62   1e-09

>Glyma19g02690.1 
          Length = 774

 Score =  185 bits (470), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 138/328 (42%), Positives = 179/328 (54%), Gaps = 39/328 (11%)

Query: 1   MASIGSLPSILETKRES---FILLHGRSQQ--RPRFPFL--------WYRPQRAFSFAVS 47
           MAS+GSLP ++E   +S    ++LH R+ +    +F  L        W R +       S
Sbjct: 1   MASMGSLPFLVEANADSTVMMMMLHNRNHKFSSSKFSTLNASSLVRGWGRGR--VKHRCS 58

Query: 48  NGGFSL--RFKPVRATAKE-GVNDD--GSDDPLQATIEKSKKVLALQRDLLQQISERRKL 102
            G   L  + K + A  K  G ++D   SD+ LQATIEKSKKVLALQR+LLQQISER+KL
Sbjct: 59  RGLLCLVEKNKHISALGKSSGTSEDKDDSDEVLQATIEKSKKVLALQRELLQQISERKKL 118

Query: 103 VXXXXXXXFDQEIDRTSYDQRESSL----QPDNASTSRKNILEQQNGNGGIVPSSYVDST 158
           V         +  D  SY+  + SL     P   S  R +  E  N NGG+V S+YV+S 
Sbjct: 119 VSSINSETTPEIGDSISYEHSDKSLSSDSNPQKGSARRGSAFE--NENGGVVSSNYVESI 176

Query: 159 ADELPETASSAVSRSYFKGEEEFE-----QPKSPKTD-----SSVKNSTKQPKDASSEKS 208
             E+P+ +   +     K EEE +     +  SP+       +S +    +P    S+  
Sbjct: 177 EKEIPDVSFVGIDLGLDKSEEEDDNLSPVEKASPRLYVDEQLNSKRYEIIKPDTLPSDIP 236

Query: 209 FLTNTLEVSVINDEKTEGSNESASPEVNNVGSDSMTEHAKPPPLAGANVMNVILVAAECA 268
             T T    +   E  E  +ES++ EV N   +   E  KPPPLAGANVMNVILVAAECA
Sbjct: 237 CSTETFSRKI---EILEALSESSTKEVANEADNVEGEGEKPPPLAGANVMNVILVAAECA 293

Query: 269 PWSKTGGLGDVAGSLPKALARRGHRVMV 296
           P+ KTGGLGDV GSLPKALARRGHRVMV
Sbjct: 294 PFVKTGGLGDVVGSLPKALARRGHRVMV 321


>Glyma13g05440.1 
          Length = 465

 Score =  185 bits (470), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 141/329 (42%), Positives = 184/329 (55%), Gaps = 39/329 (11%)

Query: 1   MASIGSLPSILETKRES---FILLHGRSQQ--RPRFPFL--------WYRPQRAFSFAVS 47
           MAS+GSLP ++E   +S    ++L  R+ +   P+F  +        W R  R      S
Sbjct: 1   MASMGSLPFLVEANADSTLMMMMLQNRNHKFSSPKFNTVNASSLVRGWGR-GRVNHRCSS 59

Query: 48  NGGFSL--RFKPVRATAKE-GVNDDG--SDDPLQATIEKSKKVLALQRDLLQQISERRKL 102
            G   L  + K + A  K  G ++D   S++ LQATIEKSKKVLALQR+LLQQISERRKL
Sbjct: 60  RGLLCLVEKNKHISALGKSSGTSEDKDESEEVLQATIEKSKKVLALQRELLQQISERRKL 119

Query: 103 VXXXXXXXFDQ-EIDRTSYDQRESSLQ----PDNASTSRKNILEQQNGNGGIVPSSYVDS 157
           V         + E D  SY+  + SL     P   S  R + +E  N NG +V S+YV S
Sbjct: 120 VSSINSESTPEIEGDSISYEHSDESLSSDSIPQKGSAKRGSAVE--NENGVLVSSNYVQS 177

Query: 158 TADELPETASSAVSRSYFKGEEEFE-----QPKSPKTD-----SSVKNSTKQPKDASSEK 207
              E+P+ +   +     KGEEE +     +  SP+       +S +  T  P   +SE 
Sbjct: 178 IEKEIPDVSFVGIDLGLDKGEEEDDNLSPVEKASPRLYFDEQLNSKRYETITPDTLTSE- 236

Query: 208 SFLTNTLEVSVINDEKTEGSNESASPEVNNVGSDSMTEHAKPPPLAGANVMNVILVAAEC 267
             +  + E S    E  E  +ES++ EV N G +  ++   PPPLAGANVMNVILVAAEC
Sbjct: 237 --IPRSTETSNRKIEILEALSESSTKEVANEGDNVESKGENPPPLAGANVMNVILVAAEC 294

Query: 268 APWSKTGGLGDVAGSLPKALARRGHRVMV 296
           AP+ KTGGLGDVAGSLPKALARRGHRVMV
Sbjct: 295 APFVKTGGLGDVAGSLPKALARRGHRVMV 323


>Glyma06g13480.1 
          Length = 645

 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 48/90 (53%), Gaps = 15/90 (16%)

Query: 210 LTNTLEVSVINDEKTEGSNESASPEVNNV---GSDSMTEHAKPPPLAGANVMNVILVAAE 266
           L   + VS    E+   S+E   PE+ +    G+ +   H            N++ V +E
Sbjct: 100 LEELMSVSHTITEEDSSSDEVEKPEIEDTEEEGAKTRVSH------------NIVFVTSE 147

Query: 267 CAPWSKTGGLGDVAGSLPKALARRGHRVMV 296
            AP+SKTGGL DV GSLP ALA RGHRVMV
Sbjct: 148 AAPYSKTGGLADVCGSLPIALAGRGHRVMV 177


>Glyma04g41370.1 
          Length = 625

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/38 (71%), Positives = 32/38 (84%)

Query: 259 NVILVAAECAPWSKTGGLGDVAGSLPKALARRGHRVMV 296
           N+++V +E AP+SKTGGL DV GSLP ALA RGHRVMV
Sbjct: 117 NIVVVTSEAAPYSKTGGLADVCGSLPIALASRGHRVMV 154