Jatropha Genome Database

JcCA0296741.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0296741.10 + phase: 0 
         (122 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g06240.1                                                       207   2e-54
Glyma13g20550.1                                                       205   7e-54

>Glyma10g06240.1 
          Length = 119

 Score =  207 bits (527), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 100/122 (81%), Positives = 107/122 (87%), Gaps = 3/122 (2%)

Query: 1   MGGKCPSRKVKKRRYSHKTARRSKFLLLFWLRDDAVYEELQKPDVEKKSLPLDEDLPGMG 60
           MGGKCP R VKKRRYSHKTARR+KF L     DD VY +L KPD E+  LP+DEDLPGMG
Sbjct: 1   MGGKCPHRNVKKRRYSHKTARRTKFELKG---DDMVYAQLNKPDQERPPLPVDEDLPGMG 57

Query: 61  QYYCLHCDRYFANVTVRDEHFKTKRHRKRLKQMMGPAPHTQLDADLAGGMGMPDNGPKLM 120
           QYYCLHCDRYFAN+TVRDEHFKTKRH+KR+KQMMGPAPHTQLDADLA GMGMPDNGPKLM
Sbjct: 58  QYYCLHCDRYFANITVRDEHFKTKRHKKRIKQMMGPAPHTQLDADLASGMGMPDNGPKLM 117

Query: 121 SM 122
           SM
Sbjct: 118 SM 119


>Glyma13g20550.1 
          Length = 119

 Score =  205 bits (522), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 99/122 (81%), Positives = 106/122 (86%), Gaps = 3/122 (2%)

Query: 1   MGGKCPSRKVKKRRYSHKTARRSKFLLLFWLRDDAVYEELQKPDVEKKSLPLDEDLPGMG 60
           MGGKCP R VKKRRYSHKTARR+KF L     DD VY +L KPD E+  LPLDEDLPGMG
Sbjct: 1   MGGKCPHRNVKKRRYSHKTARRTKFELKG---DDMVYAQLNKPDEERAPLPLDEDLPGMG 57

Query: 61  QYYCLHCDRYFANVTVRDEHFKTKRHRKRLKQMMGPAPHTQLDADLAGGMGMPDNGPKLM 120
           QYYCLHCDRYF+NV VRDEHFKTKRH+KR+KQMMGPAPHTQLDAD+A GMGMPDNGPKLM
Sbjct: 58  QYYCLHCDRYFSNVAVRDEHFKTKRHKKRIKQMMGPAPHTQLDADVAAGMGMPDNGPKLM 117

Query: 121 SM 122
           SM
Sbjct: 118 SM 119