Jatropha Genome Database
- JcCA0295991.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0295991.10 - phase: 0 /partial
(165 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g05830.2 161 3e-40
Glyma13g05830.1 161 3e-40
Glyma19g03290.1 155 2e-38
Glyma17g33940.1 71 6e-13
Glyma14g11870.2 71 6e-13
Glyma17g33940.2 70 7e-13
Glyma14g11870.1 70 7e-13
Glyma04g06450.1 66 2e-11
Glyma01g06660.1 53 2e-07
Glyma08g26260.1 52 2e-07
>Glyma13g05830.2
Length = 267
Score = 161 bits (408), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/144 (57%), Positives = 101/144 (70%), Gaps = 2/144 (1%)
Query: 23 STSCFFVPKTRGNLSTLRPFSTSFANRRILSVEASASSI-GLEKKKRVDESENLTLEHIR 81
+ SC F TR + P ++ FA + LS++A A+SI + KKR+DES+NLTL+HIR
Sbjct: 16 TPSCAFHRTTRKASISFNP-TSDFAPKSNLSLQAHAASIESVPTKKRIDESDNLTLDHIR 74
Query: 82 RSLIRQEDSIIFSLLERSQYCYNADTYDPDAFSMDGFHGSLVEYMLREIEKLHAQVGRYK 141
RSL+RQEDSIIFSL+ER+QYCYN DTYDPDAFSMDGFHGSLVEYM+ E E+LHA+VGRYK
Sbjct: 75 RSLVRQEDSIIFSLIERAQYCYNEDTYDPDAFSMDGFHGSLVEYMVGETERLHAKVGRYK 134
Query: 142 SXXXXXXXXXXXXXXXXXXXQYPQ 165
S QYPQ
Sbjct: 135 SPDEHPFFPDGLPEPVLPPLQYPQ 158
>Glyma13g05830.1
Length = 315
Score = 161 bits (407), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/144 (57%), Positives = 101/144 (70%), Gaps = 2/144 (1%)
Query: 23 STSCFFVPKTRGNLSTLRPFSTSFANRRILSVEASASSI-GLEKKKRVDESENLTLEHIR 81
+ SC F TR + P ++ FA + LS++A A+SI + KKR+DES+NLTL+HIR
Sbjct: 16 TPSCAFHRTTRKASISFNP-TSDFAPKSNLSLQAHAASIESVPTKKRIDESDNLTLDHIR 74
Query: 82 RSLIRQEDSIIFSLLERSQYCYNADTYDPDAFSMDGFHGSLVEYMLREIEKLHAQVGRYK 141
RSL+RQEDSIIFSL+ER+QYCYN DTYDPDAFSMDGFHGSLVEYM+ E E+LHA+VGRYK
Sbjct: 75 RSLVRQEDSIIFSLIERAQYCYNEDTYDPDAFSMDGFHGSLVEYMVGETERLHAKVGRYK 134
Query: 142 SXXXXXXXXXXXXXXXXXXXQYPQ 165
S QYPQ
Sbjct: 135 SPDEHPFFPDGLPEPVLPPLQYPQ 158
>Glyma19g03290.1
Length = 317
Score = 155 bits (391), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 92/124 (74%), Gaps = 1/124 (0%)
Query: 43 STSFANRRILSVEASASSI-GLEKKKRVDESENLTLEHIRRSLIRQEDSIIFSLLERSQY 101
+++FA + LS+ A A+S+ + KKRVDES+NLTL+HIRRSL+RQEDSIIF L+ER+QY
Sbjct: 37 NSNFAPKTNLSLRAHAASVESVPTKKRVDESDNLTLDHIRRSLVRQEDSIIFGLIERAQY 96
Query: 102 CYNADTYDPDAFSMDGFHGSLVEYMLREIEKLHAQVGRYKSXXXXXXXXXXXXXXXXXXX 161
CYN DTYDPDAFSMDGF GSLVEYM+RE E+LHA+VGRYKS
Sbjct: 97 CYNEDTYDPDAFSMDGFRGSLVEYMVRETERLHAKVGRYKSPDEHPFFPDGLPEPMLPPL 156
Query: 162 QYPQ 165
QYPQ
Sbjct: 157 QYPQ 160
>Glyma17g33940.1
Length = 304
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 70 DESENLTLEHIRRSLIRQEDSIIFSLLERSQYCYNADTYDPDAFSMDGFHGSLVEYMLRE 129
D TL +R L+RQED+II+ L+ER+++ N TYD + + GF GSLVE++++
Sbjct: 53 DSGNVYTLASVREDLVRQEDTIIYGLIERAKFPSNPHTYDEEYAQIQGFCGSLVEFVVKN 112
Query: 130 IEKLHAQVGRYKS 142
E + A+ GRYK+
Sbjct: 113 TEAIQAKAGRYKN 125
>Glyma14g11870.2
Length = 162
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 70 DESENLTLEHIRRSLIRQEDSIIFSLLERSQYCYNADTYDPDAFSMDGFHGSLVEYMLRE 129
D TL +R L+RQED+II+ L+ER+++ N+ TYD + GF GSLVE++++
Sbjct: 10 DSGNVYTLASVREDLVRQEDTIIYGLIERAKFPSNSHTYDEKYAQIQGFCGSLVEFVVKN 69
Query: 130 IEKLHAQVGRYKS 142
E + A+ GRYK+
Sbjct: 70 TEAIQAKAGRYKN 82
>Glyma17g33940.2
Length = 283
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 70 DESENLTLEHIRRSLIRQEDSIIFSLLERSQYCYNADTYDPDAFSMDGFHGSLVEYMLRE 129
D TL +R L+RQED+II+ L+ER+++ N TYD + + GF GSLVE++++
Sbjct: 32 DSGNVYTLASVREDLVRQEDTIIYGLIERAKFPSNPHTYDEEYAQIQGFCGSLVEFVVKN 91
Query: 130 IEKLHAQVGRYKS 142
E + A+ GRYK+
Sbjct: 92 TEAIQAKAGRYKN 104
>Glyma14g11870.1
Length = 261
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 70 DESENLTLEHIRRSLIRQEDSIIFSLLERSQYCYNADTYDPDAFSMDGFHGSLVEYMLRE 129
D TL +R L+RQED+II+ L+ER+++ N+ TYD + GF GSLVE++++
Sbjct: 10 DSGNVYTLASVREDLVRQEDTIIYGLIERAKFPSNSHTYDEKYAQIQGFCGSLVEFVVKN 69
Query: 130 IEKLHAQVGRYKS 142
E + A+ GRYK+
Sbjct: 70 TEAIQAKAGRYKN 82
>Glyma04g06450.1
Length = 295
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 64 EKKKRVDESENLTLEHIRRSLIRQEDSIIFSLLERSQYCYNADTYDPDAFSMDGFHGSLV 123
E K N T++ R SL+RQED+IIF L+ER+++ N+ TY+ S+ F G+L+
Sbjct: 17 ESYKMAKAEYNYTVDSARASLVRQEDTIIFGLIERARFPLNSPTYNQSYTSIPQFRGTLL 76
Query: 124 EYMLREIEKLHAQVGRY 140
++++R E + A+ GRY
Sbjct: 77 DFLVRHTEAIQAKAGRY 93
>Glyma01g06660.1
Length = 208
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 30/51 (58%)
Query: 115 MDGFHGSLVEYMLREIEKLHAQVGRYKSXXXXXXXXXXXXXXXXXXXQYPQ 165
MDGF+GSLVEYM+ + EKLH+QVGRYKS QYPQ
Sbjct: 1 MDGFNGSLVEYMVLQTEKLHSQVGRYKSPDEHAFFPECLPEPALPPLQYPQ 51
>Glyma08g26260.1
Length = 207
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 25/26 (96%)
Query: 115 MDGFHGSLVEYMLREIEKLHAQVGRY 140
MDGFHGSLVEY++RE EKLHA+VGRY
Sbjct: 1 MDGFHGSLVEYLVRESEKLHAKVGRY 26