Jatropha Genome Database

JcCA0294301.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0294301.10 - phase: 0 /partial
         (243 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g17760.1                                                       414   e-116
Glyma15g41370.1                                                       392   e-109

>Glyma08g17760.1 
          Length = 379

 Score =  414 bits (1065), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 201/244 (82%), Positives = 220/244 (90%), Gaps = 5/244 (2%)

Query: 1   KRPFHVQADPL--YTSH--RTSGWVSRVMASSVVGTKANFSTQSLSTNEPVVSVDWLHAN 56
           KR F ++A P+  YTS   +T+GW +  MASS VG +A +STQS+STNEPVVSVDWL+ N
Sbjct: 35  KRLFCIRAVPVSAYTSQNIKTTGW-APCMASSSVGRRATYSTQSVSTNEPVVSVDWLYDN 93

Query: 57  LREPDMKVLDASWYMPDEQRNPFQEYQVAHIPGAVFFDVDGIADRATNLPHMLPSEEAFA 116
           L+EPD+KVLDASWYMPDEQRNP QEYQVAHIPGA+FFDVDGIADR T LPHMLPSEEAFA
Sbjct: 94  LKEPDIKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDVDGIADRTTKLPHMLPSEEAFA 153

Query: 117 AAVSALGIENKDGLVVYDGKGIFSAARVWWMFRVFGHDKVWVLDGGLPRWRASGYDVESS 176
           AAVSALGIENKD LVVYDGKG+FSAARVWWMFRVFGHD+VWVLDGGLPRWRASGYDVESS
Sbjct: 154 AAVSALGIENKDDLVVYDGKGLFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESS 213

Query: 177 ASGDTILKASAASEAIEKVYQGQTVGPITFQTKFQPHLVWTLEQVKKNIEDKMHQHIDAR 236
           AS D ILKASAASEAIEKVY+GQTVGP+TFQTKFQPHLVW ++QVKKNIEDK HQHIDAR
Sbjct: 214 ASSDAILKASAASEAIEKVYKGQTVGPLTFQTKFQPHLVWNIDQVKKNIEDKTHQHIDAR 273

Query: 237 SKAR 240
           SK R
Sbjct: 274 SKPR 277


>Glyma15g41370.1 
          Length = 384

 Score =  392 bits (1006), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/244 (80%), Positives = 216/244 (88%), Gaps = 5/244 (2%)

Query: 1   KRPFHVQADPLYTSH----RTSGWVSRVMASSVVGTKANFSTQSLSTNEPVVSVDWLHAN 56
           KR F ++A P+  S     +T+GW    MASS VG +A +STQS+STNEPVVSVDWL+ N
Sbjct: 40  KRLFCIRAVPVSASTSQNIKTTGWAP-CMASSSVGRRATYSTQSVSTNEPVVSVDWLYDN 98

Query: 57  LREPDMKVLDASWYMPDEQRNPFQEYQVAHIPGAVFFDVDGIADRATNLPHMLPSEEAFA 116
           L+EPD+KVLDASWYMPDEQRNP QEYQVAHIPGA+FFDVDGIADR T LPHMLPS EAFA
Sbjct: 99  LKEPDIKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDVDGIADRTTKLPHMLPSAEAFA 158

Query: 117 AAVSALGIENKDGLVVYDGKGIFSAARVWWMFRVFGHDKVWVLDGGLPRWRASGYDVESS 176
           AAVSALGIENKD LVVYDGKG+FSAARVWWMFRVFGHD+VWVLDGGLPRWRASGYDVESS
Sbjct: 159 AAVSALGIENKDDLVVYDGKGLFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESS 218

Query: 177 ASGDTILKASAASEAIEKVYQGQTVGPITFQTKFQPHLVWTLEQVKKNIEDKMHQHIDAR 236
           AS D ILKASAA+EAIEKVY+GQTVGP+TFQTKFQPHLVW ++QVKKNIEDK HQHIDAR
Sbjct: 219 ASSDAILKASAATEAIEKVYKGQTVGPLTFQTKFQPHLVWNIDQVKKNIEDKTHQHIDAR 278

Query: 237 SKAR 240
           SK R
Sbjct: 279 SKPR 282