Jatropha Genome Database

JcCA0294231.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0294231.20 - phase: 1 /partial
         (259 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g33620.1                                                       336   1e-92
Glyma03g30770.1                                                       323   1e-88
Glyma06g10540.1                                                       131   6e-31
Glyma08g03210.1                                                       108   5e-24
Glyma08g03210.2                                                        72   7e-13
Glyma05g36370.1                                                        68   7e-12

>Glyma19g33620.1 
          Length = 671

 Score =  336 bits (862), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 173/268 (64%), Positives = 197/268 (73%), Gaps = 16/268 (5%)

Query: 1   LVTLQRRLCGSGDIFSSGTRSRLFLFNFIARNSGLPLVDLVSFSSDELASELCWNCGEEG 60
           L  L  RLCGSGDIFS G R   F FN+IARN G+ LVDLVSFSS     EL WNCG EG
Sbjct: 405 LSDLATRLCGSGDIFSGG-RGPGFSFNYIARNFGVSLVDLVSFSS---VDELSWNCGAEG 460

Query: 61  PTNKIPVLERRLKQIRNYLFILYVSLGVPVLNMGDECGQSSGGSISYGDRKPFDWNSLST 120
           PTN   VLERRLKQIRN+LFIL+VSLGVPVLNMGDECGQSSGG  +Y   KPF W++L T
Sbjct: 461 PTNNTAVLERRLKQIRNFLFILFVSLGVPVLNMGDECGQSSGGFTAYDGIKPFSWSALKT 520

Query: 121 GFGIQMTQFISFLSSLRTRWSDVLQKRNFLKEENIDWYGTDQSPPRWEDPSCKFLAMTLR 180
           GFG Q ++FI FLSSLR R S +LQ+R+FLKEENI+WYG+D  PPRWEDPSCKFLAM L+
Sbjct: 521 GFGKQTSEFIFFLSSLRKRRSYLLQRRSFLKEENIEWYGSDGDPPRWEDPSCKFLAMILK 580

Query: 181 TKS------------SGNLFMAFNAADQSESVILPQLPEGMTWLRLVDTALPFPGFFSND 228
            +             SG+LF+AFNA D  E+ +LP  PEGM+W RLVDTALPFPGFFS  
Sbjct: 581 AEVTEFLESSVSSDISGDLFIAFNATDHPETAVLPLPPEGMSWYRLVDTALPFPGFFSTS 640

Query: 229 GEPVVEQMAELIVYGMKSHSCILFEARS 256
           GE V EQ   L  Y +KS+SC LFEA +
Sbjct: 641 GEVVPEQTEGLFTYQVKSYSCTLFEANN 668


>Glyma03g30770.1 
          Length = 598

 Score =  323 bits (828), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 167/256 (65%), Positives = 188/256 (73%), Gaps = 16/256 (6%)

Query: 1   LVTLQRRLCGSGDIFSSGTRSRLFLFNFIARNSGLPLVDLVSFSSDELASELCWNCGEEG 60
           L  L  RLCGSGDIFS G R   F FN+IARN G+ LVDLVSFSS +   EL WNCGEEG
Sbjct: 346 LSNLATRLCGSGDIFSGG-RGPAFSFNYIARNFGVSLVDLVSFSSTD---ELSWNCGEEG 401

Query: 61  PTNKIPVLERRLKQIRNYLFILYVSLGVPVLNMGDECGQSSGGSISYGDRKPFDWNSLST 120
           PTN   +LERRLKQIRN+LFIL+VSLGVPVLNMGDECGQSSGG  +Y   KPF W+SL T
Sbjct: 402 PTNNTAILERRLKQIRNFLFILFVSLGVPVLNMGDECGQSSGGFTAYDGIKPFSWSSLKT 461

Query: 121 GFGIQMTQFISFLSSLRTRWSDVLQKRNFLKEENIDWYGTDQSPPRWEDPSCKFLAMTLR 180
           GFG Q +QFI FLSS R R SD+LQ+ +FLKEENI+WYG+D +PPRWED SCKFLAM L+
Sbjct: 462 GFGKQTSQFIFFLSSFRRRRSDLLQRMSFLKEENIEWYGSDGAPPRWEDLSCKFLAMALK 521

Query: 181 TKS------------SGNLFMAFNAADQSESVILPQLPEGMTWLRLVDTALPFPGFFSND 228
            +             SG+LF+AFNAA   E+ +LP  PEGM W RLVDTALPFPGFFS  
Sbjct: 522 AEEKEFLESSVSSDISGDLFIAFNAAGHPETAVLPLPPEGMLWYRLVDTALPFPGFFSAS 581

Query: 229 GEPVVEQMAELIVYGM 244
           GE V EQ A L  Y M
Sbjct: 582 GEVVPEQTAGLFTYRM 597


>Glyma06g10540.1 
          Length = 685

 Score =  131 bits (330), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 127/266 (47%), Gaps = 32/266 (12%)

Query: 3   TLQRRLCGSGDIFSSGTRSRLFLFNFIARNSGLPLVDLVSFS-----------SDELASE 51
           +   R+ GS D++S   R      NF+  + G  L DLVS++           +D     
Sbjct: 438 SFATRVAGSSDLYSVNNRRPYHGINFVIAHDGFTLRDLVSYNFKHNEANGEGGNDGSNDN 497

Query: 52  LCWNCGEEGPTNKIPVLERRLKQIRNYLFILYVSLGVPVLNMGDECGQS-SGGSISYGDR 110
             WNCG EG T+   V   R +Q++N+   L +S G P++ MGDE G + +G + SYG  
Sbjct: 498 FSWNCGLEGETDDASVRALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRNGNNNSYGH- 556

Query: 111 KPFDWNSLSTGFGIQMTQFISFLSSLRTRWS-DVLQKRNFLKEENIDWYGTDQSPPRWED 169
                    T        F  F + ++ R + +V    +FL + +I W+  +     W++
Sbjct: 557 --------DTAINNFFDHFRFFSNMIKYRHAHEVFNHESFLSKNDITWHEDN-----WDN 603

Query: 170 PSCKFLAMTLRTKSSGNLFMAFNAADQSESVILPQLPEGMTWLRLVDTALPFPGFFSNDG 229
              KFLA TL  KS G++++AFNA D    V+LP  P+   W R+VDT L  P  F  DG
Sbjct: 604 HDSKFLAFTLHDKSGGDIYLAFNAHDYFVKVLLPAPPKKRNWFRVVDTNLKSPDDFVLDG 663

Query: 230 EPVVEQMAELIVYGMKSHSCILFEAR 255
            P V        Y +  +S IL EA+
Sbjct: 664 VPNVGN-----TYNIAPYSSILLEAK 684


>Glyma08g03210.1 
          Length = 756

 Score =  108 bits (270), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 122/266 (45%), Gaps = 26/266 (9%)

Query: 8   LCGSGDIFSSGTRSRLFLFNFIARNSGLPLVDLVSFSS-----------DELASELCWNC 56
           LCGS +++  G R      NF+  + G  L DLV++++           D       WNC
Sbjct: 486 LCGSPNLYQGGGRKPWHSINFVCAHDGFTLADLVTYNNKNNLSNGEDNNDGENHNNSWNC 545

Query: 57  GEEGPTNKIPVLERRLKQIRNYLFILYVSLGVPVLNMGDECGQSSGGS----ISYGDRKP 112
           G+EG      V + R +Q+RN+   L VS GVP++ MGDE G + GG+            
Sbjct: 546 GQEGEFVSTSVKKLRKRQMRNFFLSLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYHNY 605

Query: 113 FDWNSLSTGFGIQMTQFISFLSSLRTRWSDVLQKRNFLKEENIDWYGTDQSPPRWEDPSC 172
           F W+           +F   ++  R    + L   +F   E + W+G     P W + S 
Sbjct: 606 FQWDKKEES-SSDFFRFCRLMTKFRQE-CESLGLADFPTSERLQWHGHFPGKPDWSETS- 662

Query: 173 KFLAMTLRTKSSGNLFMAFNAADQSESVILPQLPEGMTWLRLVDTALPFPGFFSNDGEP- 231
           +F+A T+     G +++AFN +    +V LP+ P G  W  LVDT+ P P  F     P 
Sbjct: 663 RFVACTMVDSVKGEIYIAFNMSHLPFTVTLPERP-GYKWEPLVDTSKPTPYDFLTPDLPG 721

Query: 232 ---VVEQMAELI---VYGMKSHSCIL 251
               ++Q A+ +   +Y M S+S I+
Sbjct: 722 RDIAIQQYAQFLDANMYPMLSYSSII 747


>Glyma08g03210.2 
          Length = 630

 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 11/108 (10%)

Query: 8   LCGSGDIFSSGTRSRLFLFNFIARNSGLPLVDLVSFSS-----------DELASELCWNC 56
           LCGS +++  G R      NF+  + G  L DLV++++           D       WNC
Sbjct: 486 LCGSPNLYQGGGRKPWHSINFVCAHDGFTLADLVTYNNKNNLSNGEDNNDGENHNNSWNC 545

Query: 57  GEEGPTNKIPVLERRLKQIRNYLFILYVSLGVPVLNMGDECGQSSGGS 104
           G+EG      V + R +Q+RN+   L VS GVP++ MGDE G + GG+
Sbjct: 546 GQEGEFVSTSVKKLRKRQMRNFFLSLMVSQGVPMIYMGDEYGHTKGGN 593


>Glyma05g36370.1 
          Length = 399

 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 109/271 (40%), Gaps = 54/271 (19%)

Query: 18  GTRSRLFLFNFIARNSGLPLVDLVSFSS-----------DELASELCWNCGEEGPTNKIP 66
           G R      NFI  + G  L DLV++++           D       WNCG+EG      
Sbjct: 136 GGRKPWHSINFICAHDGFTLADLVTYNNKNNLSNGEDNNDGENHNNSWNCGQEGEFVSTS 195

Query: 67  VLERRLKQIRNYLFILYVSLGVPVLNMGDECGQSSGGS---------ISY--GDRKP--- 112
           V + R  Q+RN+   L VS GVP++ MGDE G + GG+         ++Y   D+K    
Sbjct: 196 VKKLRKPQMRNFFLSLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYLNYFRWDKKEESS 255

Query: 113 ---FDWNSLSTGFG-IQMTQFISFLSSLRTRWSDVLQKRNFLKEENIDWYGTDQSPPRWE 168
              F +  L T F   Q    IS    L    S  +    F   EN+             
Sbjct: 256 SDFFRFCRLMTKFHRCQCNAQISISRELLIL-SCFIYFEFFCLNENVR------------ 302

Query: 169 DPSCKFLAMTLRTKSSGNLFMAFNAADQSESVILPQLPEGMTWLRLVDTALPFPGFFSND 228
             SC F       K  G +++A N +     V LP  P G  W  LVDT+ P P  F   
Sbjct: 303 --SCTFYYRVDSVK--GEIYIALNMSHLPFRVTLPDCP-GYRWEPLVDTSKPSPYDFLTP 357

Query: 229 GEP----VVEQMAELI---VYGMKSHSCILF 252
             P     ++Q A+ +   +Y M S+S I+ 
Sbjct: 358 DLPGRDIAIQQYAQFLDANMYPMLSYSSIIL 388