Jatropha Genome Database

JcCA0294231.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0294231.10 + phase: 0 
         (257 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g02950.1                                                       317   6e-87
Glyma10g02950.2                                                       305   3e-83
Glyma02g16830.1                                                       261   4e-70

>Glyma10g02950.1 
          Length = 312

 Score =  317 bits (813), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 170/257 (66%), Positives = 189/257 (73%), Gaps = 3/257 (1%)

Query: 4   KTLFVHEWQAEQRKKSKXXXXXXXXXXXXXXXXXXXXXXXGLRLKGYPEEDVKKARKLVS 63
           K  +  EWQA+QR+K+K                       G+RLK YPE+DV KARKLVS
Sbjct: 56  KEYYDDEWQAQQREKTKELHRLRIQEEEEEERKIGEYREIGMRLKEYPEDDVIKARKLVS 115

Query: 64  SFIRXXXXXXXXXXXXXXXXXLNELVLMVIWNRLDLARRDDEKDAVRSLDLLYRRVEMEI 123
           SF+R                 L ELVLMVIWNRLDLARRD+EKDA+RSLDLLYRRVE EI
Sbjct: 116 SFLRAAEEVEERIEEAAEKGELTELVLMVIWNRLDLARRDEEKDAIRSLDLLYRRVETEI 175

Query: 124 LKREATPAMRLLNDLLNMHDGFDDEGWLKECKKCMIDTFPREDPFSILVPAG---FDIDK 180
           LKREATPAMRLLNDLL M+DG++ E WLK+CKK MIDTFPREDPFSILVP G   FDIDK
Sbjct: 176 LKREATPAMRLLNDLLIMYDGYNFEEWLKKCKKVMIDTFPREDPFSILVPPGFESFDIDK 235

Query: 181 HQGPLQPPLEADDVLLRVDFVREVDALLQEVRHEPSEEQNIEGFDPESVASKLKQQEKQR 240
           H GPL+P LE D+ LLRVDFVREVD LLQEV  E SE QN  GFDPESVA++LKQQEKQ+
Sbjct: 236 HHGPLRPSLEVDNTLLRVDFVREVDELLQEVHSEESEVQNEPGFDPESVANRLKQQEKQQ 295

Query: 241 TIRKVEALLDLAINLKW 257
           TIR+VEALLDLAI LKW
Sbjct: 296 TIRQVEALLDLAIGLKW 312


>Glyma10g02950.2 
          Length = 216

 Score =  305 bits (781), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 160/216 (74%), Positives = 175/216 (81%), Gaps = 3/216 (1%)

Query: 45  LRLKGYPEEDVKKARKLVSSFIRXXXXXXXXXXXXXXXXXLNELVLMVIWNRLDLARRDD 104
           +RLK YPE+DV KARKLVSSF+R                 L ELVLMVIWNRLDLARRD+
Sbjct: 1   MRLKEYPEDDVIKARKLVSSFLRAAEEVEERIEEAAEKGELTELVLMVIWNRLDLARRDE 60

Query: 105 EKDAVRSLDLLYRRVEMEILKREATPAMRLLNDLLNMHDGFDDEGWLKECKKCMIDTFPR 164
           EKDA+RSLDLLYRRVE EILKREATPAMRLLNDLL M+DG++ E WLK+CKK MIDTFPR
Sbjct: 61  EKDAIRSLDLLYRRVETEILKREATPAMRLLNDLLIMYDGYNFEEWLKKCKKVMIDTFPR 120

Query: 165 EDPFSILVPAG---FDIDKHQGPLQPPLEADDVLLRVDFVREVDALLQEVRHEPSEEQNI 221
           EDPFSILVP G   FDIDKH GPL+P LE D+ LLRVDFVREVD LLQEV  E SE QN 
Sbjct: 121 EDPFSILVPPGFESFDIDKHHGPLRPSLEVDNTLLRVDFVREVDELLQEVHSEESEVQNE 180

Query: 222 EGFDPESVASKLKQQEKQRTIRKVEALLDLAINLKW 257
            GFDPESVA++LKQQEKQ+TIR+VEALLDLAI LKW
Sbjct: 181 PGFDPESVANRLKQQEKQQTIRQVEALLDLAIGLKW 216


>Glyma02g16830.1 
          Length = 286

 Score =  261 bits (668), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 156/274 (56%), Positives = 172/274 (62%), Gaps = 27/274 (9%)

Query: 4   KTLFVHEWQAEQRKKSKXXXXXXXXXXXXXXXXXXXXXXXGLRLKGYPEEDVKKARKLVS 63
           K  +  EWQ +QR+K+K                       G+RLK YPEEDV KARKLVS
Sbjct: 20  KEYYDDEWQTQQREKTKELHPLRKQEEEEEERKIEEYREIGMRLKEYPEEDVIKARKLVS 79

Query: 64  SFIRXXXXXXXXXXXXXXXXXLNELVLMVIWNRLDLARRDDEKDAVRSLDLLYRRVEMEI 123
           SF+R                   ELVLMVIWNRLDLAR D+EKDA+RSLDLLYRRVE   
Sbjct: 80  SFLRAAEEVEERIEEAAKKGEFTELVLMVIWNRLDLARHDEEKDAIRSLDLLYRRVE--- 136

Query: 124 LKREATPAMRLLNDLLNMHDGFDDEGWLKECKKCMIDTFPREDPFSILVPAG---FDIDK 180
               A PAMRLLNDLL M+DG+D E WLK+CKK MIDTFPREDPFSILVP G   FDIDK
Sbjct: 137 ----AIPAMRLLNDLLVMYDGYDFEEWLKKCKKVMIDTFPREDPFSILVPPGFESFDIDK 192

Query: 181 HQGP-------------LQPPL----EADDVLLRVDFVREVDALLQEVRHEPSEEQNIEG 223
                            +Q  L      DD LLRVDFVREVD LLQEVR E SE  N  G
Sbjct: 193 INSKFICLYINVKCLNLIQVYLLIHKLVDDTLLRVDFVREVDELLQEVRSEESEVHNEPG 252

Query: 224 FDPESVASKLKQQEKQRTIRKVEALLDLAINLKW 257
           FD ESVA++LKQQEKQ+TIR+VEALLDLAI L W
Sbjct: 253 FDAESVANRLKQQEKQQTIRQVEALLDLAIGLNW 286