Jatropha Genome Database

JcCA0294151.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0294151.20 - phase: 2 /partial
         (64 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g11950.1                                                        97   3e-21

>Glyma20g11950.1 
          Length = 376

 Score = 97.4 bits (241), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 47/64 (73%), Positives = 51/64 (79%)

Query: 1   CEVGIQELPKNSALGRLRGSDNVLEIYSRCYNEQPLVIQXXXXXXXXXXXXVLADILDIQ 60
           CEVGIQELPKNS LGRLRGSDNVLEIY+RCY++QPLVIQ            VLADI+DIQ
Sbjct: 313 CEVGIQELPKNSPLGRLRGSDNVLEIYTRCYSKQPLVIQGAGAGNDTTAAGVLADIVDIQ 372

Query: 61  DLFP 64
           DLFP
Sbjct: 373 DLFP 376