Jatropha Genome Database

JcCA0293541.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0293541.10 - phase: 0 /partial
         (317 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g05890.1                                                       432   e-121
Glyma11g13910.1                                                       219   2e-57
Glyma08g23360.1                                                       140   3e-33
Glyma06g41470.1                                                       130   2e-30
Glyma03g26550.1                                                       122   7e-28
Glyma16g28810.1                                                       114   2e-25
Glyma01g08240.1                                                        88   1e-17
Glyma04g33850.1                                                        73   3e-13

>Glyma12g05890.1 
          Length = 413

 Score =  432 bits (1110), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 210/305 (68%), Positives = 238/305 (78%), Gaps = 2/305 (0%)

Query: 13  TPILDAESSVLLQSISSHGGYAYVSMATLAASGDFXXXXXXXXXXWEQLHSGPWHSVLPV 72
           TP LD E++ LL +IS HGGYAYVSMA LA+ GD           WEQLHSGPWHSVLPV
Sbjct: 18  TPTLDREAAALLHAISEHGGYAYVSMAVLASGGDIRAAEAAREMAWEQLHSGPWHSVLPV 77

Query: 73  WRDAYSMACLYVAKFHYRNAEFKDALRVLDXXXXXXXXXXRKDLDSAVETVTAKARENGG 132
           WRDAYSMACL+VA+ HY N EF DALRVLD          RKDLDSA+E V+ + R +  
Sbjct: 78  WRDAYSMACLHVARHHYGNGEFLDALRVLDLGIIMGGTLLRKDLDSAIEKVSEQTRRSVR 137

Query: 133 QSLGFDKSDRKLVRETEFDKAEALRLLPMKSLSCKIVVKRSALSLEAFLREHLLSSSPVI 192
            S     S+ +LV + EFD AE L+LLP+KSLS K+VVK+SALSLE FL++H LS  PVI
Sbjct: 138 VS-DLGNSEHRLV-DREFDMAEVLQLLPVKSLSTKLVVKKSALSLEKFLKDHYLSGCPVI 195

Query: 193 ISDCMAHWPARIKWNDVDYLKRVAGDRTVPVEVGKTYLCQEWKQELITFSQFLERIQPNN 252
           ISDCM+HWPA++KWND DYL RVAGDRTVPVEVGK YLC EWKQELITFS+FL+RI+ ++
Sbjct: 196 ISDCMSHWPAKMKWNDEDYLLRVAGDRTVPVEVGKNYLCTEWKQELITFSEFLQRIKSDS 255

Query: 253 SLSAVPTYLAQHPLFDQINELRNDICVPDYCFAGGGELRSLNAWFGPAGTVTPLHHDPHH 312
                PTYLAQHPLFDQINELR DI +PDYCF GGGELRSLNAWFGPAGTVTPLHHDPHH
Sbjct: 256 CSPGGPTYLAQHPLFDQINELRKDIFIPDYCFTGGGELRSLNAWFGPAGTVTPLHHDPHH 315

Query: 313 NILAQ 317
           NILAQ
Sbjct: 316 NILAQ 320


>Glyma11g13910.1 
          Length = 214

 Score =  219 bits (559), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 99/121 (81%), Positives = 107/121 (88%)

Query: 197 MAHWPARIKWNDVDYLKRVAGDRTVPVEVGKTYLCQEWKQELITFSQFLERIQPNNSLSA 256
           MAHWPA++KWND DYL RVAGDRTVPVEVGK YLC EWKQELITFS+FL+RI+ ++    
Sbjct: 1   MAHWPAKMKWNDEDYLLRVAGDRTVPVEVGKNYLCTEWKQELITFSEFLQRIKSDSCSPG 60

Query: 257 VPTYLAQHPLFDQINELRNDICVPDYCFAGGGELRSLNAWFGPAGTVTPLHHDPHHNILA 316
             TYLAQHPLFDQINELR DI +PDYCF GGGELRSLNAWFGPAGTVTPLHHDPHHNILA
Sbjct: 61  GLTYLAQHPLFDQINELRKDIFIPDYCFTGGGELRSLNAWFGPAGTVTPLHHDPHHNILA 120

Query: 317 Q 317
           Q
Sbjct: 121 Q 121


>Glyma08g23360.1 
          Length = 160

 Score =  140 bits (352), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 67/118 (56%), Positives = 78/118 (66%)

Query: 13  TPILDAESSVLLQSISSHGGYAYVSMATLAASGDFXXXXXXXXXXWEQLHSGPWHSVLPV 72
           TP LD  S+ LL +I  HGGY  VSMATLA +GD           WEQLHSGPWHSVL V
Sbjct: 18  TPTLDLVSTALLHAIFEHGGYTCVSMATLAENGDIRTAEAVCKRAWEQLHSGPWHSVLSV 77

Query: 73  WRDAYSMACLYVAKFHYRNAEFKDALRVLDXXXXXXXXXXRKDLDSAVETVTAKAREN 130
           WR+AYSMACL VA+ HY N EFKD LRVLD          RKDLDSA+E ++ + R++
Sbjct: 78  WREAYSMACLLVARHHYHNGEFKDVLRVLDLGIIMGGTLLRKDLDSAIEKISEQTRKS 135


>Glyma06g41470.1 
          Length = 114

 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 61/90 (67%), Positives = 65/90 (72%)

Query: 13  TPILDAESSVLLQSISSHGGYAYVSMATLAASGDFXXXXXXXXXXWEQLHSGPWHSVLPV 72
           TP LD ES+ LL  IS HG YAYVSMA L A+GD           WEQLHSGPWHSVLPV
Sbjct: 14  TPTLDLESTALLHGISEHGEYAYVSMAALVANGDIRTVEAVCEMAWEQLHSGPWHSVLPV 73

Query: 73  WRDAYSMACLYVAKFHYRNAEFKDALRVLD 102
           WRD YSMACL VA  HYRN+EF+D LRVLD
Sbjct: 74  WRDTYSMACLLVASHHYRNSEFRDTLRVLD 103


>Glyma03g26550.1 
          Length = 207

 Score =  122 bits (305), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 70/137 (51%), Positives = 82/137 (59%), Gaps = 9/137 (6%)

Query: 13  TPILDAESSVLLQSISSHGGYAYVSMATLAASGDFXXXXXXXXXXWEQLHSGPWHSVLPV 72
           TP LD  S+ LL +I  HGGY  VSMATLA +GD           WEQLHS     VL V
Sbjct: 18  TPTLDLVSTALLHAIFEHGGYTCVSMATLAENGDIRTAEAVCKRAWEQLHS-----VLSV 72

Query: 73  WRDAYSMACLYVAKFHYRNAEFKDALRVLDXXXXXXXXXXRKDLDSAVETVTAKARENGG 132
           WR+AYSMACL VA+ HY N EFKD LRVLD          RKDLDSA+E ++ + R++  
Sbjct: 73  WREAYSMACLLVARHHYHNGEFKDVLRVLDLGIIMGGTLLRKDLDSAIEKISEQTRKSVR 132

Query: 133 QS-LGFDK---SDRKLV 145
            S LG  +    DRKLV
Sbjct: 133 VSDLGNSEHRLVDRKLV 149


>Glyma16g28810.1 
          Length = 665

 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/117 (49%), Positives = 70/117 (59%), Gaps = 8/117 (6%)

Query: 13  TPILDAESSVLLQSISSHGGYAYVSMATLAASGDFXXXXXXXXXXWEQLHSGPWHSVLPV 72
           TP LD  S+ LL +I  HGGY  +SMATLA +GD            E      WHSVL V
Sbjct: 247 TPTLDLVSTTLLHAIFEHGGYTCLSMATLAENGDIRTA--------EAACERAWHSVLSV 298

Query: 73  WRDAYSMACLYVAKFHYRNAEFKDALRVLDXXXXXXXXXXRKDLDSAVETVTAKARE 129
           WR+AYSMACL V + HYRN EF+D LRVLD          RKDLDSA+E ++ + R+
Sbjct: 299 WREAYSMACLLVTRHHYRNGEFRDTLRVLDLGIIMGGTLLRKDLDSAIEKISEQTRK 355


>Glyma01g08240.1 
          Length = 209

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 57/112 (50%), Gaps = 17/112 (15%)

Query: 38  MATLAASGDFXXXXXXXXXXWEQLHSGPWHSVLPVWRDAYSMACLYVAKFHYRNAEFKDA 97
           MA LA +GD           WEQLHSGPWHSVLP+W DAYSMACL VA+ HY N      
Sbjct: 1   MAALATNGDNRTAEASCEMAWEQLHSGPWHSVLPMWHDAYSMACLLVARHHYSNGTL--- 57

Query: 98  LRVLDXXXXXXXXXXRKDLDSAVETVTAKARENGGQSLGFDKSDRKLVRETE 149
                          RKDLDSA+E ++ + R+    S   +   R  V  TE
Sbjct: 58  --------------LRKDLDSAIEKISEQTRKTVMVSDLGNSEHRLFVECTE 95


>Glyma04g33850.1 
          Length = 45

 Score = 73.2 bits (178), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/45 (68%), Positives = 37/45 (82%)

Query: 225 VGKTYLCQEWKQELITFSQFLERIQPNNSLSAVPTYLAQHPLFDQ 269
           VGK YLC +WKQELITFS+FL+RI+ ++     PTYLAQHPLFDQ
Sbjct: 1   VGKNYLCTKWKQELITFSEFLQRIKSDSCSPGGPTYLAQHPLFDQ 45