Jatropha Genome Database

JcCA0293441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0293441.10 - phase: 0 /pseudo/partial
         (69 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g44090.1                                                       103   3e-23
Glyma15g01210.1                                                       103   4e-23
Glyma08g22550.1                                                       102   8e-23
Glyma10g30580.1                                                        92   9e-20
Glyma20g17920.1                                                        89   1e-18
Glyma20g36910.1                                                        87   4e-18
Glyma03g40830.1                                                        79   9e-16
Glyma19g43530.1                                                        77   4e-15
Glyma01g44510.1                                                        65   2e-11
Glyma07g03550.1                                                        57   5e-09

>Glyma13g44090.1 
          Length = 133

 Score =  103 bits (258), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 49/59 (83%), Positives = 52/59 (88%)

Query: 1  MEEITEGVNNVTITGGDLHKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMGI 59
          ME ITEGVNN+ I   D +KKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGM I
Sbjct: 1  MEGITEGVNNININISDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAI 59


>Glyma15g01210.1 
          Length = 131

 Score =  103 bits (257), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 49/59 (83%), Positives = 54/59 (91%), Gaps = 2/59 (3%)

Query: 1  MEEITEGVNNVTITGGDLHKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMGI 59
          ME+ITEGVNN+ I+  D +KKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGM I
Sbjct: 1  MEDITEGVNNINIS--DSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHDEVELSALGMAI 57


>Glyma08g22550.1 
          Length = 144

 Score =  102 bits (255), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 50/59 (84%), Positives = 53/59 (89%), Gaps = 2/59 (3%)

Query: 1  MEEITEGVNNVTITGGDLHKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMGI 59
          ME ITEGVNN+ I+  D +KKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGM I
Sbjct: 12 MEAITEGVNNINIS--DSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAI 68


>Glyma10g30580.1 
          Length = 132

 Score = 92.4 bits (228), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 41/48 (85%), Positives = 43/48 (89%)

Query: 12 TITGGDLHKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMGI 59
           +T  D HKKNRIQVSNTKKPLFFYVNLAKRY+QQHNEVELSALGM I
Sbjct: 9  ALTANDSHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAI 56


>Glyma20g17920.1 
          Length = 54

 Score = 88.6 bits (218), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%), Gaps = 2/55 (3%)

Query: 3  EITEGVNNVTITGGDLHKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGM 57
          +ITEGVNN+ I   D +KKNRIQVSN+K+PLFFYVNLAKRYMQQ +EVELSALGM
Sbjct: 1  DITEGVNNINIF--DSYKKNRIQVSNSKQPLFFYVNLAKRYMQQRDEVELSALGM 53


>Glyma20g36910.1 
          Length = 132

 Score = 87.0 bits (214), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 39/47 (82%), Positives = 42/47 (89%)

Query: 13 ITGGDLHKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMGI 59
          +T  D HKK RIQVSNTKKPLFFYVNLAKRY+QQH+EVELSALGM I
Sbjct: 10 LTANDSHKKYRIQVSNTKKPLFFYVNLAKRYIQQHDEVELSALGMAI 56


>Glyma03g40830.1 
          Length = 138

 Score = 79.3 bits (194), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 37/45 (82%), Positives = 40/45 (88%)

Query: 15 GGDLHKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMGI 59
          G +  KKN+IQVSNTKKPLFFYVNLAKRY+QQ NEV LSALGMGI
Sbjct: 18 GVESPKKNKIQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGMGI 62


>Glyma19g43530.1 
          Length = 129

 Score = 77.4 bits (189), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 35/40 (87%), Positives = 38/40 (95%)

Query: 20 KKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMGI 59
          KKN+IQVSNTKKPLFFYVNLAKRY+QQ +EV LSALGMGI
Sbjct: 23 KKNKIQVSNTKKPLFFYVNLAKRYIQQRDEVVLSALGMGI 62


>Glyma01g44510.1 
          Length = 132

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/37 (75%), Positives = 33/37 (89%)

Query: 23 RIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMGI 59
          RIQVS TKKP FFY+NLAK+Y++Q N+VELSALGM I
Sbjct: 29 RIQVSKTKKPFFFYLNLAKKYIKQGNDVELSALGMAI 65


>Glyma07g03550.1 
          Length = 141

 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/36 (75%), Positives = 28/36 (77%)

Query: 24 IQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMGI 59
          + VSNTKKPLF      KRYMQQHNEVELSALGM I
Sbjct: 29 LPVSNTKKPLFSTSISPKRYMQQHNEVELSALGMAI 64