Jatropha Genome Database
- JcCA0292331.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0292331.10 + phase: 0
(60 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g06020.1 68 2e-12
Glyma13g16650.5 67 6e-12
Glyma13g16650.4 67 6e-12
Glyma13g16650.3 67 6e-12
Glyma13g16650.1 67 6e-12
Glyma13g16650.2 57 3e-09
Glyma09g07660.1 49 1e-06
>Glyma17g06020.1
Length = 356
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/56 (64%), Positives = 44/56 (78%), Gaps = 2/56 (3%)
Query: 1 MKKGSLNPNVKLKLSLPPPAEVSLSKFLTQSGTFMDGDLLVNRDGVRIVSQIESEA 56
MKKG+L + LKLS+P + + +KFLT+SGTF DGDLLVNRDGVRIVSQ + EA
Sbjct: 1 MKKGNLG--LGLKLSVPVSDQSNFAKFLTESGTFKDGDLLVNRDGVRIVSQNDVEA 54
>Glyma13g16650.5
Length = 356
Score = 66.6 bits (161), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/56 (62%), Positives = 44/56 (78%), Gaps = 2/56 (3%)
Query: 1 MKKGSLNPNVKLKLSLPPPAEVSLSKFLTQSGTFMDGDLLVNRDGVRIVSQIESEA 56
MKKG+L + LKLS+P + + ++FLT+SGTF DGDLLVNRDGVRIVSQ + EA
Sbjct: 1 MKKGNLG--LGLKLSVPVSDQSNFARFLTESGTFKDGDLLVNRDGVRIVSQNDVEA 54
>Glyma13g16650.4
Length = 356
Score = 66.6 bits (161), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/56 (62%), Positives = 44/56 (78%), Gaps = 2/56 (3%)
Query: 1 MKKGSLNPNVKLKLSLPPPAEVSLSKFLTQSGTFMDGDLLVNRDGVRIVSQIESEA 56
MKKG+L + LKLS+P + + ++FLT+SGTF DGDLLVNRDGVRIVSQ + EA
Sbjct: 1 MKKGNLG--LGLKLSVPVSDQSNFARFLTESGTFKDGDLLVNRDGVRIVSQNDVEA 54
>Glyma13g16650.3
Length = 356
Score = 66.6 bits (161), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/56 (62%), Positives = 44/56 (78%), Gaps = 2/56 (3%)
Query: 1 MKKGSLNPNVKLKLSLPPPAEVSLSKFLTQSGTFMDGDLLVNRDGVRIVSQIESEA 56
MKKG+L + LKLS+P + + ++FLT+SGTF DGDLLVNRDGVRIVSQ + EA
Sbjct: 1 MKKGNLG--LGLKLSVPVSDQSNFARFLTESGTFKDGDLLVNRDGVRIVSQNDVEA 54
>Glyma13g16650.1
Length = 356
Score = 66.6 bits (161), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/56 (62%), Positives = 44/56 (78%), Gaps = 2/56 (3%)
Query: 1 MKKGSLNPNVKLKLSLPPPAEVSLSKFLTQSGTFMDGDLLVNRDGVRIVSQIESEA 56
MKKG+L + LKLS+P + + ++FLT+SGTF DGDLLVNRDGVRIVSQ + EA
Sbjct: 1 MKKGNLG--LGLKLSVPVSDQSNFARFLTESGTFKDGDLLVNRDGVRIVSQNDVEA 54
>Glyma13g16650.2
Length = 354
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 4/56 (7%)
Query: 1 MKKGSLNPNVKLKLSLPPPAEVSLSKFLTQSGTFMDGDLLVNRDGVRIVSQIESEA 56
MKKG+L + LKLS+P + + ++ T+SGTF DGDLLVNRDGVRIVSQ + EA
Sbjct: 1 MKKGNLG--LGLKLSVPVSDQSNFAR--TESGTFKDGDLLVNRDGVRIVSQNDVEA 52
>Glyma09g07660.1
Length = 321
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 3/48 (6%)
Query: 12 LKLSLPPPA-EVSLSKFLTQ--SGTFMDGDLLVNRDGVRIVSQIESEA 56
LKL++P + S +KFL++ SGTF GDLLVN +GVRIVS+IE EA
Sbjct: 7 LKLTVPAASGRGSFTKFLSEPESGTFKAGDLLVNNEGVRIVSEIEVEA 54