Jatropha Genome Database

JcCA0290151.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0290151.10 - phase: 2 /partial
         (329 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g00840.1                                                        86   4e-17
Glyma10g35070.1                                                        81   2e-15
Glyma20g32480.2                                                        74   2e-13
Glyma20g32480.1                                                        74   2e-13
Glyma07g19540.1                                                        67   2e-11
Glyma20g00850.1                                                        57   2e-08
Glyma20g24370.2                                                        55   9e-08
Glyma20g24370.1                                                        55   1e-07

>Glyma20g00840.1 
          Length = 549

 Score = 86.3 bits (212), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/220 (37%), Positives = 101/220 (45%), Gaps = 41/220 (18%)

Query: 1   NTLGTH-LYGNNHMSLGLSQVGSQIPPLQDQNHHHPSTNMLRLGGAGAAKFEHIISPP-- 57
           N LGTH LYG NHMSLGLS         Q QNH   + ++L LG A   KFEH+ISP   
Sbjct: 218 NPLGTHHLYGTNHMSLGLSA--------QLQNHQAATNSILSLGSA--PKFEHLISPNLH 267

Query: 58  -PPNS------------STFFMSDSNQTS-----------FPSKPLHGLMQLPDLQXXXX 93
             P+S            S+FFM+D NQ             F +K LHGLMQLPDLQ    
Sbjct: 268 HSPSSFGVQSPPPPPQSSSFFMTDPNQAFQDLQSQNQGHLFSNKQLHGLMQLPDLQGTTN 327

Query: 94  XXXXXXXXXXXXXXXXXXPNRMSG--NDNGANSSTGTATXXXXXXXXXXXXXXXXXXMDD 151
                                +S   N N + S                         + 
Sbjct: 328 INSTTSASSVSGSANNTNLFNLSFFPNTNASGSIINDQFSNMTGVTNNNQGTATLYSTNS 387

Query: 152 HVSST-AGIHSLYSN-SMQQENITPHMSATALLQKAAQMG 189
            V+S   G+ SL+ N S+QQ+N++PHMSATALLQKAAQMG
Sbjct: 388 PVNSNQVGLSSLFGNSSVQQDNMSPHMSATALLQKAAQMG 427


>Glyma10g35070.1 
          Length = 496

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 142/360 (39%), Gaps = 113/360 (31%)

Query: 1   NTLGTHLYGNNHM-SLGLSQVGSQIPPLQDQNHHHPSTN-MLRLG----GAGAAKFEHII 54
           N LGTHL+G NH  SL LSQVG+Q+  +Q QN    + N +LRLG    GA A KFEH+I
Sbjct: 213 NPLGTHLFGTNHTTSLSLSQVGNQLSQVQKQNQTATNYNSILRLGNNNVGAAATKFEHLI 272

Query: 55  SPPPPN------------SSTFFMSD-SNQTSFPS--KPLHGLMQLPDLQXXXXXXXXXX 99
             PP N            SS FFM+D +NQ  F      L GLMQL DLQ          
Sbjct: 273 --PPLNHSSFGHSPQSMPSSAFFMNDNTNQALFEEHQSQLQGLMQLQDLQ---------- 320

Query: 100 XXXXXXXXXXXXPNRMSGNDNGANSSTGTATXXXXXXXXXXXXXXXXXXMDDHVSSTAG- 158
                            GN N ++SS+                      + +  S  AG 
Sbjct: 321 -----------------GNTNNSDSSS-------VGPPNSNLFNLSFFPIKNESSPHAGS 356

Query: 159 -IHSLYSNSMQQENITPHMSATALLQKAAQMGXXXXXXXXXXXXXXXXXXXXXXXXKADR 217
              S++ NS++  + + HMSATALLQ+AAQMG                            
Sbjct: 357 SFSSIFGNSIENAS-SSHMSATALLQQAAQMGSTTTTTTNNGSSLLGG------------ 403

Query: 218 PPLVSTNFGNAEIESQNQLQGLMNSLANXXXXXXXXXXXXXXXXXXXXXXISLEQPHNSG 277
             + + N   AE +  + LQGLMNS+AN                               G
Sbjct: 404 --MCTNNSSKAENDHHHNLQGLMNSIAN-------------------------------G 430

Query: 278 NFSNVEDAKLHKLTLDFL--------XXXXXXXXXXXXXXXITLSSLDTEIKSAQGNKPF 329
           N S V      KLTLDFL                        T+SSLD ++KSAQ  + F
Sbjct: 431 NTSFVNFGGSDKLTLDFLGVGGMMTNMSGGFSQREQQQHVTGTMSSLDHDLKSAQSYRHF 490


>Glyma20g32480.2 
          Length = 560

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 154/410 (37%), Gaps = 142/410 (34%)

Query: 1   NTLGTHLYGNNHM-SLGLSQVGSQIPPLQDQNHHHPSTNMLRLG---GAGAAKFEHIISP 56
           N+LGTHL+G NH  SL LSQVG+Q+  +Q QN    + ++  LG   GA A KFEH+I  
Sbjct: 206 NSLGTHLFGTNHTTSLSLSQVGNQLSQVQKQNQTATTNSIFLLGNNVGAAATKFEHLI-- 263

Query: 57  PPPN------------SSTFFMSDSNQTS------------FPSKPLHGLMQLPDLQXXX 92
           PP N            SS FFM+++   S            F +K L GLMQL DLQ   
Sbjct: 264 PPLNQSSFGHSPQSMPSSAFFMNNNTNQSLFEEHHSQHGPLFSTKQLQGLMQLQDLQ--- 320

Query: 93  XXXXXXXXXXXXXXXXXXXPNRMSGNDNGANSSTGTA---TXXXXXXXXXXXXXXXXXXM 149
                                   GN N ++SS+  A   +                  +
Sbjct: 321 ------------------------GNTNNSDSSSVAAPNNSNLFNLSFFPSSNISTGTII 356

Query: 150 DDHVSSTAG-------IHSLYSNSMQQENI-TPH--------------------MSATAL 181
            D  ++ +G         +LY NS+  EN+ +PH                    MSATAL
Sbjct: 357 PDQFNNISGGDQGTTTTTTLYGNSI--ENVSSPHVGSSFSSIFGNSMENVSSPHMSATAL 414

Query: 182 LQKAAQMGXXXXXXXXXXXXXXXXXXXXXXXXKADRPPLVSTNFGNAEIESQNQLQGLMN 241
           LQ+AAQMG                              + + N   AE +  + LQGLMN
Sbjct: 415 LQQAAQMGSTTTTTTNCSSLLRG---------------MCTNNGCKAENDHHHNLQGLMN 459

Query: 242 SLANXXXXXXXXXXXXXXXXXXXXXXISLEQPHNSGNFSNVEDA--KL-----------H 288
           S+AN                            +N   F NV+++  KL            
Sbjct: 460 SIANGNTSLFGSMQGNE---------------NNLCGFHNVDESNNKLPQNLSVNFGGSD 504

Query: 289 KLTLDFL---------XXXXXXXXXXXXXXXITLSSLDTEIKSAQGNKPF 329
           KLTLDFL                         T+SSLD ++KSAQ N+ F
Sbjct: 505 KLTLDFLGVGGMMRNMSSGGFSQREQQQHDIGTMSSLDHDLKSAQPNRHF 554


>Glyma20g32480.1 
          Length = 560

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 154/410 (37%), Gaps = 142/410 (34%)

Query: 1   NTLGTHLYGNNHM-SLGLSQVGSQIPPLQDQNHHHPSTNMLRLG---GAGAAKFEHIISP 56
           N+LGTHL+G NH  SL LSQVG+Q+  +Q QN    + ++  LG   GA A KFEH+I  
Sbjct: 206 NSLGTHLFGTNHTTSLSLSQVGNQLSQVQKQNQTATTNSIFLLGNNVGAAATKFEHLI-- 263

Query: 57  PPPN------------SSTFFMSDSNQTS------------FPSKPLHGLMQLPDLQXXX 92
           PP N            SS FFM+++   S            F +K L GLMQL DLQ   
Sbjct: 264 PPLNQSSFGHSPQSMPSSAFFMNNNTNQSLFEEHHSQHGPLFSTKQLQGLMQLQDLQ--- 320

Query: 93  XXXXXXXXXXXXXXXXXXXPNRMSGNDNGANSSTGTA---TXXXXXXXXXXXXXXXXXXM 149
                                   GN N ++SS+  A   +                  +
Sbjct: 321 ------------------------GNTNNSDSSSVAAPNNSNLFNLSFFPSSNISTGTII 356

Query: 150 DDHVSSTAG-------IHSLYSNSMQQENI-TPH--------------------MSATAL 181
            D  ++ +G         +LY NS+  EN+ +PH                    MSATAL
Sbjct: 357 PDQFNNISGGDQGTTTTTTLYGNSI--ENVSSPHVGSSFSSIFGNSMENVSSPHMSATAL 414

Query: 182 LQKAAQMGXXXXXXXXXXXXXXXXXXXXXXXXKADRPPLVSTNFGNAEIESQNQLQGLMN 241
           LQ+AAQMG                              + + N   AE +  + LQGLMN
Sbjct: 415 LQQAAQMGSTTTTTTNCSSLLRG---------------MCTNNGCKAENDHHHNLQGLMN 459

Query: 242 SLANXXXXXXXXXXXXXXXXXXXXXXISLEQPHNSGNFSNVEDA--KL-----------H 288
           S+AN                            +N   F NV+++  KL            
Sbjct: 460 SIANGNTSLFGSMQGNE---------------NNLCGFHNVDESNNKLPQNLSVNFGGSD 504

Query: 289 KLTLDFL---------XXXXXXXXXXXXXXXITLSSLDTEIKSAQGNKPF 329
           KLTLDFL                         T+SSLD ++KSAQ N+ F
Sbjct: 505 KLTLDFLGVGGMMRNMSSGGFSQREQQQHDIGTMSSLDHDLKSAQPNRHF 554


>Glyma07g19540.1 
          Length = 435

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 58/99 (58%), Gaps = 14/99 (14%)

Query: 2   TLGTHLYGN-NHMSLGLSQVGSQIPPLQDQNHHHPSTNMLRLGGA-GAAKFEHIISP--- 56
            +   LYGN N++SLGLSQ+G QIP + DQNH   S+++L  GGA    +F+HI+ P   
Sbjct: 178 AISNQLYGNSNNISLGLSQMGPQIPSIHDQNHQ--SSDLLHFGGAPRTGQFDHILPPNIA 235

Query: 57  ------PPPNSSTFFMSDSNQTSFPS-KPLHGLMQLPDL 88
                 P   +  FFM + NQT   S KP  GL+QL DL
Sbjct: 236 SSSPFRPSMQTPPFFMQEPNQTYHDSNKPFQGLIQLSDL 274


>Glyma20g00850.1 
          Length = 348

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/101 (43%), Positives = 55/101 (54%), Gaps = 22/101 (21%)

Query: 2   TLGTHLYGN-NHMSLGLSQVGSQIPPLQDQNHHHPSTNMLRLGGAGAAKFEHIISPPPPN 60
            +G  LYGN N+MSLGLSQ    IP + DQN   PS  M   G   A +F+HI+   PPN
Sbjct: 211 AIGNQLYGNSNNMSLGLSQ----IPSIHDQNPQ-PSELMRFSGAPRAGQFDHIL---PPN 262

Query: 61  SST------------FFMSDSNQTSFPS-KPLHGLMQLPDL 88
            ++            FF+ +SNQT   S KP  GL+QL DL
Sbjct: 263 IASSSPFRHSMQTPPFFLQESNQTYHDSNKPFQGLIQLSDL 303


>Glyma20g24370.2 
          Length = 502

 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/99 (45%), Positives = 57/99 (57%), Gaps = 16/99 (16%)

Query: 3   LGTHLYGNN-HMSLGLSQVGSQIPPLQDQNHHHPSTNMLRLGGAGA--AKFEHIISPP-- 57
           +G+HLYG+  +M+L LSQVGSQI  +QD N     T +LRLG A     +F+HI+  P  
Sbjct: 149 IGSHLYGSTTNMALNLSQVGSQISTMQDPNAQ--PTELLRLGAASGRTGQFDHILGSPFR 206

Query: 58  PPNSST----FFM-SDSNQTSF---PSKPL-HGLMQLPD 87
           P N       FFM S+ NQT      +KP   GLMQL D
Sbjct: 207 PSNQQQQQQPFFMSSEPNQTYHHPDQNKPFQQGLMQLSD 245


>Glyma20g24370.1 
          Length = 567

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/99 (45%), Positives = 57/99 (57%), Gaps = 16/99 (16%)

Query: 3   LGTHLYGNN-HMSLGLSQVGSQIPPLQDQNHHHPSTNMLRLGGAGA--AKFEHIISPP-- 57
           +G+HLYG+  +M+L LSQVGSQI  +QD N     T +LRLG A     +F+HI+  P  
Sbjct: 214 IGSHLYGSTTNMALNLSQVGSQISTMQDPNAQ--PTELLRLGAASGRTGQFDHILGSPFR 271

Query: 58  PPNSST----FFM-SDSNQTSF---PSKPL-HGLMQLPD 87
           P N       FFM S+ NQT      +KP   GLMQL D
Sbjct: 272 PSNQQQQQQPFFMSSEPNQTYHHPDQNKPFQQGLMQLSD 310