Jatropha Genome Database

JcCA0289691.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0289691.10 - phase: 0 /pseudo/partial
         (463 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g31550.1                                                       268   1e-71
Glyma13g24900.1                                                        74   4e-13

>Glyma07g31550.1 
          Length = 914

 Score =  268 bits (684), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 138/258 (53%), Positives = 182/258 (70%), Gaps = 6/258 (2%)

Query: 212 MQKLCKSTTRRVPALMAXXXXXXXXXXXXXXSQIEIVVHNFENQLRKASPDQFNSLIRKS 271
           +Q   +   +R   LMA              SQIE V+  FE QLR +  DQ N LIR+S
Sbjct: 657 IQGEAEDLDQREMELMAKETQQVQHELEHAKSQIETVIQKFEKQLRISGRDQLNYLIRES 716

Query: 272 ESAIASIVEAHCPAESLPANEADSSSYTPQLGEEVHVKGLGDKVVTVVEALGNDETILVQ 331
           ESAIASIV+AH PA+S P NEAD + YTPQ+GE+VHVKGLG K+ TVVE+ G+D TI+VQ
Sbjct: 717 ESAIASIVKAHTPADSFPINEADRALYTPQIGEQVHVKGLGGKLATVVESPGDDGTIMVQ 776

Query: 332 YGKIRVCVKKSDIRSIQANKRR-----DSTHLVPRLRKQGQQSHSEVNK-NEEVSYGPRV 385
           YGK++V VKKS+I +I ++++       STH   +  + G+   +  NK N+++SYGP V
Sbjct: 777 YGKVKVRVKKSNIIAIPSSRKNAVTSSSSTHQGRQSLRNGEYRDNVDNKTNDDISYGPVV 836

Query: 386 QTSKNTVDLRGMRVEEAAIYLDMALSESKPKSVIFVVHGMGTGAVKQRALEILGKHPCVA 445
           +TSKNTVDLRGMRVEEA+I L+MA++ S+P SV+FV+HGMGTGAVK+RAL+IL  HP V 
Sbjct: 837 RTSKNTVDLRGMRVEEASIQLEMAINASRPYSVLFVIHGMGTGAVKERALQILQNHPRVT 896

Query: 446 KYEAEGPTNFGCTVAYIK 463
            +E E P N+G T+AY+K
Sbjct: 897 NFEPESPMNYGSTIAYVK 914


>Glyma13g24900.1 
          Length = 387

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 43/69 (62%)

Query: 20 LACFCLVKTSQEFHGLILFXRILEITSRWSKIFQLLVGTYHAFVRSWKWPLKNHLSSXTK 79
          L C CL +  Q F  L +  +ILEITS  +KI QLL GTYH FVR WKWP  NHL S  K
Sbjct: 31 LGCICLSRKIQNFFDLTVSLQILEITSPLNKISQLLAGTYHVFVRFWKWPQHNHLFSLMK 90

Query: 80 FVAEQILLK 88
           + E IL K
Sbjct: 91 LLVELILQK 99



 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 12/71 (16%)

Query: 263 QFNSLIRKSESAIASIVEAHCPAESLPANEADSSSYTPQLGEEVHVKGLGDKVVTVVEAL 322
           Q NSLIR+SESAIASIV+AH PA+S P+ +             + ++ L       + A 
Sbjct: 266 QLNSLIRESESAIASIVKAHTPADSFPSMKL------------IVLRILHKLESKSIIAP 313

Query: 323 GNDETILVQYG 333
           G+D TI+VQYG
Sbjct: 314 GDDGTIMVQYG 324