Jatropha Genome Database

JcCA0288061.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0288061.20 + phase: 0 
         (209 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g03680.2                                                       242   2e-64
Glyma10g03680.1                                                       242   2e-64
Glyma02g16120.1                                                       189   2e-48

>Glyma10g03680.2 
          Length = 224

 Score =  242 bits (618), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 128/207 (61%), Positives = 152/207 (73%), Gaps = 14/207 (6%)

Query: 1   MFGMSYGEIFLLLGATAALIGPKDLPVIARTAGRLAGRAIGYVQLARGQFESVMQQSQAR 60
           M G SYGEIFLLLGATAALIGPKDLP+I RTAGRLAGRAIGYVQLARGQF++VMQQSQAR
Sbjct: 1   MLGFSYGEIFLLLGATAALIGPKDLPIICRTAGRLAGRAIGYVQLARGQFDTVMQQSQAR 60

Query: 61  QVHKELQDTMAQLEAIRHEIRSISILSPGPLTRRLVDNVDNTSGSNANGICENQDVENTL 120
           QVHKELQDTMAQL+AIRHEIRSISI++PGPLTRRLVD+ D TS SN +   E    EN+ 
Sbjct: 61  QVHKELQDTMAQLDAIRHEIRSISIINPGPLTRRLVDDPDQTSISNESRKPEESGQENSS 120

Query: 121 KVTISQPSSEQRIGGSIATSAFSKASDSCSMHSQATVYARLAEAAAQKTSLLDSGADAEK 180
             T+ + S+             S +S+SC M +QAT+Y+RL  + A K  L  S  + EK
Sbjct: 121 IPTVMKDST-------------SMSSNSCHMQNQATIYSRLVNSPAIKNELSASSTEVEK 167

Query: 181 LIDDAGLPNVLPVSAESAGMLPKRSGN 207
           + D   L  VLP+SAE+AG+LP R  +
Sbjct: 168 IEDKLQL-TVLPISAENAGLLPIRGAD 193


>Glyma10g03680.1 
          Length = 224

 Score =  242 bits (618), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 128/207 (61%), Positives = 152/207 (73%), Gaps = 14/207 (6%)

Query: 1   MFGMSYGEIFLLLGATAALIGPKDLPVIARTAGRLAGRAIGYVQLARGQFESVMQQSQAR 60
           M G SYGEIFLLLGATAALIGPKDLP+I RTAGRLAGRAIGYVQLARGQF++VMQQSQAR
Sbjct: 1   MLGFSYGEIFLLLGATAALIGPKDLPIICRTAGRLAGRAIGYVQLARGQFDTVMQQSQAR 60

Query: 61  QVHKELQDTMAQLEAIRHEIRSISILSPGPLTRRLVDNVDNTSGSNANGICENQDVENTL 120
           QVHKELQDTMAQL+AIRHEIRSISI++PGPLTRRLVD+ D TS SN +   E    EN+ 
Sbjct: 61  QVHKELQDTMAQLDAIRHEIRSISIINPGPLTRRLVDDPDQTSISNESRKPEESGQENSS 120

Query: 121 KVTISQPSSEQRIGGSIATSAFSKASDSCSMHSQATVYARLAEAAAQKTSLLDSGADAEK 180
             T+ + S+             S +S+SC M +QAT+Y+RL  + A K  L  S  + EK
Sbjct: 121 IPTVMKDST-------------SMSSNSCHMQNQATIYSRLVNSPAIKNELSASSTEVEK 167

Query: 181 LIDDAGLPNVLPVSAESAGMLPKRSGN 207
           + D   L  VLP+SAE+AG+LP R  +
Sbjct: 168 IEDKLQL-TVLPISAENAGLLPIRGAD 193


>Glyma02g16120.1 
          Length = 140

 Score =  189 bits (480), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 102/159 (64%), Positives = 117/159 (73%), Gaps = 19/159 (11%)

Query: 1   MFGMSYGEIFLLLGATAALIGPKDLPVIARTAGRLAGRAIGYVQLARGQFESVMQQSQAR 60
           M G SYGEIFL LGATAALIGPKDLP+I RTAGRLAGRAIG VQLARGQF++VMQQSQAR
Sbjct: 1   MLGFSYGEIFLSLGATAALIGPKDLPIICRTAGRLAGRAIGCVQLARGQFDTVMQQSQAR 60

Query: 61  QVHKELQDTMAQLEAIRHEIRSISILSPGPLTRRLVDNVDNTSGSNANGICENQDVENTL 120
           +VHKELQDTMAQL+AI HEIRS+SI++ GPLTRRLVDN D TS S+A  I     V   L
Sbjct: 61  RVHKELQDTMAQLDAIHHEIRSVSIINAGPLTRRLVDNPDQTSISDAI-IYMIYAVLQLL 119

Query: 121 KVTISQPSSEQRIGGSIATSAFSKASDSCSMHSQATVYA 159
           +                   + S +S+SC+M SQAT+YA
Sbjct: 120 R------------------DSTSMSSNSCNMQSQATIYA 140