Jatropha Genome Database

JcCA0286251.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0286251.20 - phase: 0 
         (160 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g32660.3                                                       215   1e-56
Glyma09g32660.1                                                       215   1e-56
Glyma01g34820.1                                                       215   2e-56
Glyma09g32660.2                                                       142   2e-34
Glyma08g03960.1                                                        98   4e-21
Glyma01g07390.1                                                        69   3e-12
Glyma04g32390.1                                                        68   4e-12
Glyma02g13120.1                                                        68   5e-12
Glyma08g27010.1                                                        67   1e-11
Glyma18g50240.1                                                        67   1e-11
Glyma06g22210.2                                                        65   2e-11
Glyma06g22210.3                                                        65   3e-11
Glyma06g22210.1                                                        65   3e-11
Glyma16g12800.1                                                        65   3e-11
Glyma03g20380.1                                                        64   6e-11

>Glyma09g32660.3 
          Length = 479

 Score =  215 bits (548), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 106/164 (64%), Positives = 123/164 (75%), Gaps = 5/164 (3%)

Query: 1   MQVIPRSASEATLYDGRVLERVKGEGKQHITEEGSSSQTEEDVKGSSMTLRAKD----ST 56
           +QVI  + SEA  Y+GR LER KG+GKQ +TEEGSSSQ+E DVK  S  LRAKD    ST
Sbjct: 317 LQVISNNISEAMPYEGRPLERTKGDGKQRVTEEGSSSQSE-DVKAISTNLRAKDASDKST 375

Query: 57  AEGFSFDFSAIKPGIASDLKFGGCGSYPNLPWVSTTGSGPNGRTISGVTYRYSANQIRIV 116
            EG   DFS IKPG+A+D+KFGGCGSYPNLPWVST+GSGPNGRTISGVTY+Y  NQ+RIV
Sbjct: 376 GEGAIIDFSNIKPGLAADVKFGGCGSYPNLPWVSTSGSGPNGRTISGVTYKYGTNQVRIV 435

Query: 117 CACHGSHMSPEEFVRHXXXXXXXXXXGSGLASFPSTNPAASAQS 160
           CACHGSHM+PEEFVRH           + L +  + NPAAS+ S
Sbjct: 436 CACHGSHMTPEEFVRHSNEDQAAAEGNTVLGTVANGNPAASSHS 479


>Glyma09g32660.1 
          Length = 479

 Score =  215 bits (548), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 106/164 (64%), Positives = 123/164 (75%), Gaps = 5/164 (3%)

Query: 1   MQVIPRSASEATLYDGRVLERVKGEGKQHITEEGSSSQTEEDVKGSSMTLRAKD----ST 56
           +QVI  + SEA  Y+GR LER KG+GKQ +TEEGSSSQ+E DVK  S  LRAKD    ST
Sbjct: 317 LQVISNNISEAMPYEGRPLERTKGDGKQRVTEEGSSSQSE-DVKAISTNLRAKDASDKST 375

Query: 57  AEGFSFDFSAIKPGIASDLKFGGCGSYPNLPWVSTTGSGPNGRTISGVTYRYSANQIRIV 116
            EG   DFS IKPG+A+D+KFGGCGSYPNLPWVST+GSGPNGRTISGVTY+Y  NQ+RIV
Sbjct: 376 GEGAIIDFSNIKPGLAADVKFGGCGSYPNLPWVSTSGSGPNGRTISGVTYKYGTNQVRIV 435

Query: 117 CACHGSHMSPEEFVRHXXXXXXXXXXGSGLASFPSTNPAASAQS 160
           CACHGSHM+PEEFVRH           + L +  + NPAAS+ S
Sbjct: 436 CACHGSHMTPEEFVRHSNEDQAAAEGNTVLGTVANGNPAASSHS 479


>Glyma01g34820.1 
          Length = 495

 Score =  215 bits (547), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 106/164 (64%), Positives = 122/164 (74%), Gaps = 5/164 (3%)

Query: 1   MQVIPRSASEATLYDGRVLERVKGEGKQHITEEGSSSQTEEDVKGSSMTLRAKD----ST 56
           +QVI  + SEA  Y+GR LER KG+GKQ + EEGSSSQ E DVK  S  LRAKD    ST
Sbjct: 333 LQVISNNISEAMPYEGRPLERTKGDGKQRVNEEGSSSQPE-DVKARSTNLRAKDVSGQST 391

Query: 57  AEGFSFDFSAIKPGIASDLKFGGCGSYPNLPWVSTTGSGPNGRTISGVTYRYSANQIRIV 116
            EG   DFS IKPG+A+D+KFGGCGSYPNLPWVST+GSGPNGRTISGVTY+YS NQ+RIV
Sbjct: 392 GEGAIIDFSNIKPGLAADVKFGGCGSYPNLPWVSTSGSGPNGRTISGVTYKYSTNQVRIV 451

Query: 117 CACHGSHMSPEEFVRHXXXXXXXXXXGSGLASFPSTNPAASAQS 160
           CACHGSHM+PEEFVRH           + L +  + NPAAS+ S
Sbjct: 452 CACHGSHMTPEEFVRHANEDQAAAEGNAVLGTVANGNPAASSHS 495


>Glyma09g32660.2 
          Length = 445

 Score =  142 bits (357), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/160 (50%), Positives = 94/160 (58%), Gaps = 31/160 (19%)

Query: 1   MQVIPRSASEATLYDGRVLERVKGEGKQHITEEGSSSQTEEDVKGSSMTLRAKDSTAEGF 60
           +QVI  + SEA  Y+GR LER KG+GKQ +TEEGSSSQ+E DVK  S  LRAKD      
Sbjct: 317 LQVISNNISEAMPYEGRPLERTKGDGKQRVTEEGSSSQSE-DVKAISTNLRAKD------ 369

Query: 61  SFDFSAIKPGIASDLKFGGCGSYPNLPWVSTTGSGPNGRTISGVTYRYSANQIRIVCACH 120
                      ASD   G              GSGPNGRTISGVTY+Y  NQ+RIVCACH
Sbjct: 370 -----------ASDKSTG-------------EGSGPNGRTISGVTYKYGTNQVRIVCACH 405

Query: 121 GSHMSPEEFVRHXXXXXXXXXXGSGLASFPSTNPAASAQS 160
           GSHM+PEEFVRH           + L +  + NPAAS+ S
Sbjct: 406 GSHMTPEEFVRHSNEDQAAAEGNTVLGTVANGNPAASSHS 445


>Glyma08g03960.1 
          Length = 52

 Score = 97.8 bits (242), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 42/48 (87%), Positives = 46/48 (95%)

Query: 84  PNLPWVSTTGSGPNGRTISGVTYRYSANQIRIVCACHGSHMSPEEFVR 131
           PNLPWVSTTGSGP GRTISGVTYR++ NQIRIVCACHGSHM+P+EFVR
Sbjct: 1   PNLPWVSTTGSGPTGRTISGVTYRFNTNQIRIVCACHGSHMTPKEFVR 48


>Glyma01g07390.1 
          Length = 407

 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 3/112 (2%)

Query: 24  GEGKQHITEEGSSSQTEEDVKGSSMTLRAKDSTAEGFSFDFSAIKPGIASDL--KFGGCG 81
           GE K  ++ +    ++ +D  GS   +    +       +  + KP  A  +  +  G  
Sbjct: 274 GEAKSPVSNQSMQERSSQDPAGSGGKMNENVTRTSKAEAENPSRKPHPAQKITGRHIGTN 333

Query: 82  SYPNLPWVSTTGSGPNGRTISGVTYRY-SANQIRIVCACHGSHMSPEEFVRH 132
           S  ++P V T G GPNGR I G+ Y+Y    ++RI+C CHG+ +SP EFV+H
Sbjct: 334 SMEDMPCVFTKGDGPNGRRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKH 385


>Glyma04g32390.1 
          Length = 247

 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 10/118 (8%)

Query: 24  GEGKQHITEEGSSSQTEEDVKGSSMTLRAKDSTAEGFSFDFSAIKP-GIASDLKFGGCGS 82
           G G  H + EG +S  +   K  + ++ ++ + A+G S   +  KP   A   K G   S
Sbjct: 111 GLGPTH-SAEGVASNIQTSTKQENDSMASQKTMAKGISPRPADTKPENPAKKHKLGNYCS 169

Query: 83  YP--------NLPWVSTTGSGPNGRTISGVTYRYSANQIRIVCACHGSHMSPEEFVRH 132
                      +P V+TTG GPNG+ I G  Y+Y + Q+ IVC CHG+ ++P EFV H
Sbjct: 170 LKGDVMEILRRMPSVTTTGDGPNGKRIEGFLYKYRSGQVCIVCVCHGNFLTPAEFVMH 227


>Glyma02g13120.1 
          Length = 381

 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 79  GCGSYPNLPWVSTTGSGPNGRTISGVTYRY-SANQIRIVCACHGSHMSPEEFVRH 132
           G  S  ++P V T G GPNGR I G+ Y+Y    ++RI+C CHG+ +SP EFV+H
Sbjct: 305 GTNSMEDMPCVFTKGDGPNGRRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKH 359


>Glyma08g27010.1 
          Length = 383

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 1/49 (2%)

Query: 85  NLPWVSTTGSGPNGRTISGVTYRY-SANQIRIVCACHGSHMSPEEFVRH 132
           ++P VST G GPNG+ I G  YRY    ++RIVC CHGS ++P EFV+H
Sbjct: 315 DMPCVSTKGEGPNGKRIEGFLYRYGKGEEVRIVCVCHGSFLTPSEFVKH 363


>Glyma18g50240.1 
          Length = 377

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 1/49 (2%)

Query: 85  NLPWVSTTGSGPNGRTISGVTYRY-SANQIRIVCACHGSHMSPEEFVRH 132
           ++P VST G GPNG+ I G  YRY    ++RIVC CHGS ++P EFV+H
Sbjct: 309 DMPCVSTKGDGPNGKRIEGFLYRYGKGEEVRIVCVCHGSFLTPSEFVKH 357


>Glyma06g22210.2 
          Length = 244

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 19/109 (17%)

Query: 35  SSSQTEEDVKGSSMTL------RAKDSTAEGFSF-----DFSAIKPGIASDLKFGGCGSY 83
           +S++ E D K S  T+      R  DS  E  +      ++ ++K  +   L+       
Sbjct: 124 TSTKEENDSKASHKTIAKAISPRPADSKPENPAKKHKLGNYCSLKGDVMEILR------- 176

Query: 84  PNLPWVSTTGSGPNGRTISGVTYRYSANQIRIVCACHGSHMSPEEFVRH 132
             +P V+TTG GPNG+ I G  Y+Y + Q+ IVC CHG+ ++P EFV H
Sbjct: 177 -QMPSVTTTGDGPNGKRIEGFLYKYRSGQVCIVCVCHGNFLTPAEFVMH 224


>Glyma06g22210.3 
          Length = 249

 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 19/109 (17%)

Query: 35  SSSQTEEDVKGSSMTL------RAKDSTAEGFSF-----DFSAIKPGIASDLKFGGCGSY 83
           +S++ E D K S  T+      R  DS  E  +      ++ ++K  +   L+       
Sbjct: 129 TSTKEENDSKASHKTIAKAISPRPADSKPENPAKKHKLGNYCSLKGDVMEILR------- 181

Query: 84  PNLPWVSTTGSGPNGRTISGVTYRYSANQIRIVCACHGSHMSPEEFVRH 132
             +P V+TTG GPNG+ I G  Y+Y + Q+ IVC CHG+ ++P EFV H
Sbjct: 182 -QMPSVTTTGDGPNGKRIEGFLYKYRSGQVCIVCVCHGNFLTPAEFVMH 229


>Glyma06g22210.1 
          Length = 249

 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 19/109 (17%)

Query: 35  SSSQTEEDVKGSSMTL------RAKDSTAEGFSF-----DFSAIKPGIASDLKFGGCGSY 83
           +S++ E D K S  T+      R  DS  E  +      ++ ++K  +   L+       
Sbjct: 129 TSTKEENDSKASHKTIAKAISPRPADSKPENPAKKHKLGNYCSLKGDVMEILR------- 181

Query: 84  PNLPWVSTTGSGPNGRTISGVTYRYSANQIRIVCACHGSHMSPEEFVRH 132
             +P V+TTG GPNG+ I G  Y+Y + Q+ IVC CHG+ ++P EFV H
Sbjct: 182 -QMPSVTTTGDGPNGKRIEGFLYKYRSGQVCIVCVCHGNFLTPAEFVMH 229


>Glyma16g12800.1 
          Length = 385

 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 37/51 (72%), Gaps = 2/51 (3%)

Query: 82  SYPNLPWVSTTGSGPNGRTISGVTYRYSANQIRIVCACHGSHMSPEEFVRH 132
           S P +P+VST G   NGRT++G  YRY+ +++ I+C CHGS  SP EFV+H
Sbjct: 281 SLPPMPYVSTKGD--NGRTVNGFLYRYTKSEVSIICVCHGSTFSPAEFVQH 329


>Glyma03g20380.1 
          Length = 354

 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 2/51 (3%)

Query: 82  SYPNLPWVSTTGSGPNGRTISGVTYRYSANQIRIVCACHGSHMSPEEFVRH 132
           S P +P+V T G   NGRT++G  YRY+ +++ IVC CHGS  SP EFV+H
Sbjct: 285 SLPQMPYVFTKGD--NGRTVNGFLYRYTKSEVSIVCVCHGSTFSPAEFVQH 333