Jatropha Genome Database

JcCA0286161.40
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0286161.40 - phase: 0 /partial
         (93 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g29640.1                                                       130   3e-31
Glyma20g37660.1                                                       128   1e-30
Glyma08g05870.2                                                       102   6e-23
Glyma08g05870.1                                                       102   6e-23
Glyma05g33810.1                                                       102   8e-23
Glyma05g24400.2                                                        95   2e-20
Glyma05g24400.1                                                        94   2e-20
Glyma08g19070.1                                                        92   1e-19
Glyma15g05920.1                                                        91   2e-19
Glyma18g35010.1                                                        91   4e-19
Glyma20g37660.2                                                        77   4e-15
Glyma11g28400.1                                                        57   5e-09
Glyma18g34470.1                                                        57   6e-09

>Glyma10g29640.1 
          Length = 464

 Score =  130 bits (327), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 59/86 (68%), Positives = 79/86 (91%)

Query: 1   DFGILAIPTVPGPAPKLNTDPTTLEVFRAKAFSLLSIAGVSGFCQVSIPLGMHDDLPLSI 60
           DFG+L IPTVPGP PKL T+ + LE+FRA+AFSLLSIAGVSGFCQVSIPLGM+++LPLSI
Sbjct: 370 DFGVLMIPTVPGPPPKLQTNTSDLEIFRARAFSLLSIAGVSGFCQVSIPLGMYNNLPLSI 429

Query: 61  SLLAKNGSDGFLLNVVQILYDTLQEQ 86
           SL+A++G+D FLL++V+ LYD+++++
Sbjct: 430 SLVARHGADKFLLHLVESLYDSIEDR 455


>Glyma20g37660.1 
          Length = 433

 Score =  128 bits (322), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 59/86 (68%), Positives = 78/86 (90%)

Query: 1   DFGILAIPTVPGPAPKLNTDPTTLEVFRAKAFSLLSIAGVSGFCQVSIPLGMHDDLPLSI 60
           DFG L IPTVPGP PKL T+ + LE+FRA+AFSLLSIAGVSGFCQVSIPLGM+++LPLSI
Sbjct: 339 DFGALMIPTVPGPPPKLQTNTSDLEIFRARAFSLLSIAGVSGFCQVSIPLGMYNNLPLSI 398

Query: 61  SLLAKNGSDGFLLNVVQILYDTLQEQ 86
           SL+A++G+D FLL++V+ LYD+++++
Sbjct: 399 SLVARHGADRFLLHLVESLYDSIKDR 424


>Glyma08g05870.2 
          Length = 591

 Score =  102 bits (255), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 49/93 (52%), Positives = 67/93 (72%)

Query: 1   DFGILAIPTVPGPAPKLNTDPTTLEVFRAKAFSLLSIAGVSGFCQVSIPLGMHDDLPLSI 60
           D GIL IPTV  P PKL       E ++++AFSLLSIA +SG CQVSIPLG +D  P+S+
Sbjct: 370 DEGILVIPTVADPPPKLGGKEILSEDYQSRAFSLLSIASISGCCQVSIPLGFYDKYPVSV 429

Query: 61  SLLAKNGSDGFLLNVVQILYDTLQEQVAVSLRN 93
           SL+A++G D FLL+ +Q +Y TLQEQ  ++ ++
Sbjct: 430 SLIARHGGDRFLLDTLQTVYTTLQEQADIASKS 462


>Glyma08g05870.1 
          Length = 591

 Score =  102 bits (255), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 49/93 (52%), Positives = 67/93 (72%)

Query: 1   DFGILAIPTVPGPAPKLNTDPTTLEVFRAKAFSLLSIAGVSGFCQVSIPLGMHDDLPLSI 60
           D GIL IPTV  P PKL       E ++++AFSLLSIA +SG CQVSIPLG +D  P+S+
Sbjct: 370 DEGILVIPTVADPPPKLGGKEILSEDYQSRAFSLLSIASISGCCQVSIPLGFYDKYPVSV 429

Query: 61  SLLAKNGSDGFLLNVVQILYDTLQEQVAVSLRN 93
           SL+A++G D FLL+ +Q +Y TLQEQ  ++ ++
Sbjct: 430 SLIARHGGDRFLLDTLQTVYTTLQEQADIASKS 462


>Glyma05g33810.1 
          Length = 587

 Score =  102 bits (254), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 49/93 (52%), Positives = 67/93 (72%)

Query: 1   DFGILAIPTVPGPAPKLNTDPTTLEVFRAKAFSLLSIAGVSGFCQVSIPLGMHDDLPLSI 60
           D GIL IPTV  P PKL       E ++++AFSLLSIA +SG CQVSIPLG +D  P+S+
Sbjct: 366 DEGILVIPTVADPPPKLGGKEILSEDYQSRAFSLLSIASISGCCQVSIPLGFYDKYPVSV 425

Query: 61  SLLAKNGSDGFLLNVVQILYDTLQEQVAVSLRN 93
           SL+A++G D FLL+ +Q +Y TLQEQ  ++ ++
Sbjct: 426 SLIARHGGDRFLLDTLQTVYTTLQEQADIASKS 458


>Glyma05g24400.2 
          Length = 578

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/89 (53%), Positives = 60/89 (67%)

Query: 1   DFGILAIPTVPGPAPKLNTDPTTLEVFRAKAFSLLSIAGVSGFCQVSIPLGMHDDLPLSI 60
           D GIL IPTV G   KLNT       F  + F+L SIA VSG CQV+IPLG HDD  LS+
Sbjct: 382 DDGILVIPTVAGSQLKLNTKKGFSSEFHDRTFALSSIASVSGCCQVTIPLGYHDDCSLSV 441

Query: 61  SLLAKNGSDGFLLNVVQILYDTLQEQVAV 89
           S ++ +G+D FLL+ +  +Y TLQEQV+V
Sbjct: 442 SFISFHGADKFLLDTILDIYSTLQEQVSV 470


>Glyma05g24400.1 
          Length = 603

 Score = 94.4 bits (233), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/89 (53%), Positives = 60/89 (67%)

Query: 1   DFGILAIPTVPGPAPKLNTDPTTLEVFRAKAFSLLSIAGVSGFCQVSIPLGMHDDLPLSI 60
           D GIL IPTV G   KLNT       F  + F+L SIA VSG CQV+IPLG HDD  LS+
Sbjct: 382 DDGILVIPTVAGSQLKLNTKKGFSSEFHDRTFALSSIASVSGCCQVTIPLGYHDDCSLSV 441

Query: 61  SLLAKNGSDGFLLNVVQILYDTLQEQVAV 89
           S ++ +G+D FLL+ +  +Y TLQEQV+V
Sbjct: 442 SFISFHGADKFLLDTILDIYSTLQEQVSV 470


>Glyma08g19070.1 
          Length = 598

 Score = 92.0 bits (227), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/90 (54%), Positives = 61/90 (67%)

Query: 1   DFGILAIPTVPGPAPKLNTDPTTLEVFRAKAFSLLSIAGVSGFCQVSIPLGMHDDLPLSI 60
           D GIL IPTV     KLNT+      F  +AF+L SIA +SG CQV+IPLG H+D   SI
Sbjct: 378 DDGILVIPTVADYPLKLNTEKGFSSEFHDRAFALSSIASISGCCQVAIPLGCHNDCCASI 437

Query: 61  SLLAKNGSDGFLLNVVQILYDTLQEQVAVS 90
           SL++ +G D FLLN V  +Y TLQEQV+V+
Sbjct: 438 SLISAHGVDKFLLNTVLDMYSTLQEQVSVA 467


>Glyma15g05920.1 
          Length = 595

 Score = 91.3 bits (225), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/90 (53%), Positives = 62/90 (68%)

Query: 1   DFGILAIPTVPGPAPKLNTDPTTLEVFRAKAFSLLSIAGVSGFCQVSIPLGMHDDLPLSI 60
           D GIL IPTV     KLNT+      F  +AF+L SIA +SG CQV+IPLG H+D   S+
Sbjct: 375 DDGILVIPTVADYPLKLNTEKGFSSEFGDRAFALSSIASISGCCQVAIPLGCHNDCCASV 434

Query: 61  SLLAKNGSDGFLLNVVQILYDTLQEQVAVS 90
           SL++ +G+D FLLN V  +Y TLQEQV+V+
Sbjct: 435 SLISAHGADKFLLNTVLDMYSTLQEQVSVA 464


>Glyma18g35010.1 
          Length = 86

 Score = 90.5 bits (223), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 46/86 (53%), Positives = 56/86 (65%)

Query: 1  DFGILAIPTVPGPAPKLNTDPTTLEVFRAKAFSLLSIAGVSGFCQVSIPLGMHDDLPLSI 60
          D GIL IPTV G   KLNT       F  + F+L SIA VSG CQV+IPLG HDD  L +
Sbjct: 1  DDGILVIPTVAGSQLKLNTKKGFSSEFHDRTFALSSIASVSGCCQVTIPLGYHDDCSLYV 60

Query: 61 SLLAKNGSDGFLLNVVQILYDTLQEQ 86
          S ++ +G+D FLLN +  +Y TLQEQ
Sbjct: 61 SFVSFHGADKFLLNTILDIYSTLQEQ 86


>Glyma20g37660.2 
          Length = 391

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 36/46 (78%), Positives = 40/46 (86%)

Query: 1   DFGILAIPTVPGPAPKLNTDPTTLEVFRAKAFSLLSIAGVSGFCQV 46
           DFG L IPTVPGP PKL T+ + LE+FRA+AFSLLSIAGVSGFCQV
Sbjct: 339 DFGALMIPTVPGPPPKLQTNTSDLEIFRARAFSLLSIAGVSGFCQV 384


>Glyma11g28400.1 
          Length = 84

 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 7/88 (7%)

Query: 1  DFGILAIPTVPGPAPKLNTD--PTTLEVFRAKAFSLLSIAGVSGFCQVSIPLGMHDDLPL 58
          D GIL IPTV G   KLNT   P +         +LL    V     V+IPLG H D  L
Sbjct: 2  DDGILVIPTVAGSQLKLNTKKGPLSSMTEHLHYRALLVYLDV-----VTIPLGYHVDCSL 56

Query: 59 SISLLAKNGSDGFLLNVVQILYDTLQEQ 86
          S+S ++ +G+D FLL+ +  +Y TLQEQ
Sbjct: 57 SVSFVSFHGADKFLLDTILDIYSTLQEQ 84


>Glyma18g34470.1 
          Length = 76

 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 46/89 (51%), Gaps = 14/89 (15%)

Query: 1  DFGILAIPTVPGPAPKLNTDPTTLEVFRAKAFSLLSIAGVSGFCQVSIPLGMHDDLPLSI 60
          D GIL IPT+ G   KLNT       F  + F+L SIA VSG CQ             + 
Sbjct: 1  DDGILVIPTIAGNQLKLNTKKGVSSEFHDRTFALSSIASVSGCCQ-------------AF 47

Query: 61 SLLAKNGSDGFLLNVVQILYDTLQEQVAV 89
           L A   +D FLL+ +  +Y TLQEQV+V
Sbjct: 48 KLFA-GYTDKFLLDTILDIYSTLQEQVSV 75